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MW865309.1__QZI86467.1__PODOV027v1_30001__00001
Bact-VirMW865309.1__QZI86467.1__PODOV027v1_30001__00001
Identity
- Accession:
- MW865309 ↗
- Kingdom:
- phage
Quality
83.4
mean pLDDT
Taxonomy
TaxID: 2859298
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 27-91
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ctrA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.72 | 58.0 | 3.71e-01 | 87.7% | 28.9% |
| 4edgA03 | 1.20.50.20 | Mainly Alpha › Up-down Bundle › Pheromone ER-1 › DnaG, RNA polymerase domain, helical bundle | 0.71 | 58.0 | 6.06e-01 | 93.8% | 100.0% |
| 1b48A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.69 | 57.0 | 4.90e-01 | 93.8% | 78.0% |
| 7wu8B01 | 1.20.1160.20 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › | 0.63 | 51.0 | 4.86e-01 | 93.8% | 88.6% |
| 3k1hA00 | 3.30.1120.180 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 | 0.63 | 46.0 | 3.94e-01 | 81.5% | 61.7% |
| 4ks9A01 | 1.20.140.90 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Malonyl-CoA decarboxylase, oligemerization domain | 0.61 | 52.0 | 4.26e-01 | 98.5% | 95.2% |
| 1sumB02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.61 | 53.0 | 4.39e-01 | 100.0% | 67.8% |
| 3s64A00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.61 | 44.0 | 4.16e-01 | 80.0% | 67.9% |
| 3qilB00 | 1.25.40.730 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.60 | 43.0 | 3.90e-01 | 93.8% | 53.6% |
| 6j3eA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.58 | 46.0 | 3.71e-01 | 95.4% | 81.6% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 45.0 | 4.56e-01 | 100.0% | 95.2% |
| 2mtfA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 48.0 | 4.03e-01 | 100.0% | 70.2% |
| 1jogA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.55 | 47.0 | 3.83e-01 | 100.0% | 87.4% |
| 8gpvA01 | 1.25.60.10 | Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like | 0.55 | 49.0 | 3.93e-01 | 100.0% | 62.8% |
| 3caxA01 | 1.20.120.520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like | 0.54 | 46.0 | 3.28e-01 | 100.0% | 41.5% |
| 4wcgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 41.0 | 4.27e-01 | 100.0% | 91.8% |
| 1mw9X02 | 1.10.460.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 | 0.53 | 43.0 | 3.41e-01 | 100.0% | 57.7% |
| 5z4zC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 41.0 | 3.69e-01 | 100.0% | 62.5% |
| 2pjpA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 41.0 | 4.23e-01 | 98.5% | 96.7% |
| 2e9xD01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 42.0 | 3.46e-01 | 100.0% | 48.2% |
| 4kmfA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 41.0 | 4.22e-01 | 100.0% | 98.4% |
| 2dk8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 41.0 | 4.13e-01 | 100.0% | 100.0% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3967813 | 5086.1.1.93 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_EMRA | 0.69 | 47.0 | 3.82e-01 | 72.3% | 93.8% |
| 4036709 | 192.7.1.3 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Phe_tRNA-synt_N | 0.69 | 52.0 | 4.87e-01 | 81.5% | 87.5% |
| 1070208 | 3599.1.1.1 ↗ | alpha superhelices › Mitochondrial malonyl-CoA decarboxylase helical domain › Mitochondrial malonyl-CoA decarboxylase helical domain › Mitochondrial malonyl-CoA decarboxylase helical domain › MCD_N | 0.61 | 52.0 | 4.26e-01 | 98.5% | 95.2% |
| 3596473 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 49.0 | 4.95e-01 | 100.0% | 95.4% |
| 3709887 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.60 | 50.0 | 4.03e-01 | 96.9% | 51.1% |
| 3280481 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.59 | 50.0 | 4.86e-01 | 100.0% | 86.7% |
| 3987015 | 101.1.2.6 ↗ | alpha arrays › HTH › HTH › winged helix domain › GntR | 0.58 | 50.0 | 4.80e-01 | 100.0% | 85.3% |
| 3686269 | 109.1.1.12 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_7 | 0.58 | 47.0 | 3.74e-01 | 96.9% | 82.6% |
| 4534098 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.56 | 46.0 | 3.52e-01 | 100.0% | 36.6% |
| 4239540 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 45.0 | 3.81e-01 | 100.0% | 53.6% |
| 5008813 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 45.0 | 3.49e-01 | 100.0% | 57.0% |
| 5051399 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 38.0 | 3.81e-01 | 96.9% | 72.9% |
| 3964187 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.53 | 37.0 | 3.51e-01 | 73.8% | 96.2% |
| 4679870 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 46.0 | 4.07e-01 | 100.0% | 66.3% |
| 4995430 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.53 | 40.0 | 3.58e-01 | 98.5% | 56.8% |
| 4525341 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.53 | 37.0 | 3.66e-01 | 75.4% | 74.3% |
| 5052090 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 40.0 | 4.17e-01 | 98.5% | 91.7% |
| 4240410 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.53 | 42.0 | 3.35e-01 | 93.8% | 50.0% |
| 3909408 | 101.1.2.68 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 | 0.53 | 43.0 | 4.12e-01 | 100.0% | 80.0% |
| 4059092 | 101.1.2.27 ↗ | alpha arrays › HTH › HTH › winged helix domain › LexA_DNA_bind | 0.52 | 43.0 | 4.06e-01 | 100.0% | 77.5% |
| 3943470 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.52 | 43.0 | 4.00e-01 | 100.0% | 72.9% |
| 3483510 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 40.0 | 4.06e-01 | 100.0% | 93.8% |
| 5081391 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 42.0 | 3.95e-01 | 100.0% | 74.1% |
| 4946050 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 39.0 | 4.06e-01 | 98.5% | 96.7% |
| 4019721 | 101.1.2.97 ↗ | alpha arrays › HTH › HTH › winged helix domain › RPA_C | 0.51 | 43.0 | 3.83e-01 | 100.0% | 65.3% |
| 2387843 | 101.1.21.0 ↗ | alpha arrays › HTH › HTH › HTH in T7 RNA polymerase | 0.51 | 40.0 | 3.42e-01 | 100.0% | 49.6% |
| 4943667 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 43.0 | 4.29e-01 | 100.0% | 92.9% |
| 3920267 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 39.0 | 3.79e-01 | 98.5% | 75.0% |
| 5009381 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 39.0 | 3.87e-01 | 98.5% | 84.3% |
| 3174373 | 101.1.2.780 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF31199 | 0.50 | 41.0 | 3.98e-01 | 100.0% | 84.0% |
| 5031878 | 101.1.2.110 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_IclR | 0.50 | 38.0 | 3.97e-01 | 98.5% | 98.3% |