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MW865322.1__QZI86532.1__SIPHO018v1_130001__00001
Bact-VirMW865322.1__QZI86532.1__SIPHO018v1_130001__00001
Identity
- Accession:
- MW865322 ↗
- Kingdom:
- phage
Quality
89.7
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 36-150
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13479.13 best | AAA_24 | 39.3 | 8.10e-10 | 99.1% | 49.2% |
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2l82A00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 45.0 | 4.01e-01 | 100.0% | 51.2% |
| 4c7oA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 49.0 | 4.11e-01 | 100.0% | 48.5% |
| 3ngxA02 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.64 | 42.0 | 4.81e-01 | 93.0% | 92.9% |
| 8dtpC01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 57.0 | 4.40e-01 | 100.0% | 52.8% |
| 1m32A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.63 | 46.0 | 3.57e-01 | 100.0% | 35.4% |
| 4impA02 | 3.40.50.11460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 46.0 | 3.81e-01 | 94.8% | 43.6% |
| 2hqbA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 44.0 | 4.01e-01 | 100.0% | 57.2% |
| 3ke8A01 | 3.40.1010.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, catalytic domain | 0.58 | 39.0 | 3.96e-01 | 100.0% | 69.0% |
| 3imkA00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 42.0 | 3.86e-01 | 100.0% | 55.7% |
| 4yzoC00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.57 | 51.0 | 3.68e-01 | 100.0% | 81.8% |
| 1wdeA01 | 3.40.1010.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › Tetrapyrrole methylase, N-terminal domain | 0.57 | 41.0 | 4.14e-01 | 100.0% | 74.8% |
| 1edzA02 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.57 | 45.0 | 4.29e-01 | 97.4% | 73.3% |
| 3cf4A02 | 3.40.50.2030 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 39.0 | 3.35e-01 | 100.0% | 42.9% |
| 2p9bA02 | 3.30.110.90 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Amidohydrolase | 0.56 | 27.0 | 3.02e-01 | 93.0% | 55.8% |
| 4hi0E00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 44.0 | 3.71e-01 | 100.0% | 49.5% |
| 6yhrA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 49.0 | 4.11e-01 | 100.0% | 78.6% |
| 3outA02 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 43.0 | 4.45e-01 | 100.0% | 88.0% |
| 3rkuA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 47.0 | 3.60e-01 | 100.0% | 39.9% |
| 7a8rA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 49.0 | 4.11e-01 | 100.0% | 77.9% |
| 3fi9A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 42.0 | 3.89e-01 | 100.0% | 65.0% |
| 4pioA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 48.0 | 4.13e-01 | 100.0% | 61.9% |
| 3l41A02 | 3.40.50.10190 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain | 0.54 | 35.0 | 3.53e-01 | 95.7% | 65.5% |
| 2b4lA01 | 3.40.190.100 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Glycine betaine-binding periplasmic protein; domain 2 | 0.53 | 34.0 | 3.51e-01 | 94.8% | 66.7% |
| 1wu7A03 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.52 | 34.0 | 3.73e-01 | 93.0% | 79.4% |
| 5exeA01 | 3.40.50.970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains | 0.52 | 46.0 | 3.66e-01 | 100.0% | 60.8% |
| 1evlA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.52 | 36.0 | 3.67e-01 | 93.0% | 72.3% |
| 2ebfX04 | 3.40.50.11550 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 47.0 | 3.63e-01 | 100.0% | 57.3% |
| 3lkdA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 44.0 | 3.37e-01 | 100.0% | 39.0% |
| 3om0A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 43.0 | 3.88e-01 | 91.3% | 81.9% |
| 2npnA01 | 3.40.1010.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › Tetrapyrrole methylase, N-terminal domain | 0.51 | 42.0 | 4.13e-01 | 100.0% | 82.2% |
| 2aznA00 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.50 | 44.0 | 3.65e-01 | 100.0% | 84.5% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3173252 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.75 | 70.0 | 4.97e-01 | 100.0% | 38.4% |
| 4974886 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.73 | 61.0 | 4.85e-01 | 100.0% | 46.4% |
| 4970710 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.72 | 61.0 | 4.88e-01 | 100.0% | 47.7% |
| 4934251 | 2004.1.1.21 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RecA | 0.72 | 62.0 | 4.97e-01 | 100.0% | 48.6% |
| None | — | 0.72 | 60.0 | 4.80e-01 | 100.0% | 47.0% | |
| 5075266 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.71 | 61.0 | 4.79e-01 | 100.0% | 45.7% |
| 3852953 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.70 | 56.0 | 4.41e-01 | 100.0% | 41.2% |
| 5077007 | 2004.1.1.129 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Zot | 0.70 | 60.0 | 4.81e-01 | 100.0% | 49.3% |
| 5076963 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.69 | 58.0 | 4.51e-01 | 100.0% | 42.9% |
| 5036067 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.66 | 60.0 | 4.85e-01 | 100.0% | 64.5% |
| 3944293 | 2004.1.1.200 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_25 | 0.66 | 52.0 | 4.13e-01 | 100.0% | 40.8% |
| 4967311 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.65 | 58.0 | 4.56e-01 | 100.0% | 46.6% |
| 4318837 | 2007.1.2.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ABC_sub_bind | 0.64 | 45.0 | 4.20e-01 | 100.0% | 57.9% |
| 3729688 | 7568.1.1.0 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain | 0.63 | 42.0 | 4.51e-01 | 98.3% | 78.0% |
| 5052708 | 2004.1.1.162 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 | 0.63 | 58.0 | 4.56e-01 | 100.0% | 67.7% |
| 1842810 | 7574.1.1.7 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_N | 0.61 | 43.0 | 3.70e-01 | 100.0% | 46.2% |
| 5070941 | 2004.1.1.790 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GvpD_P-loop | 0.61 | 55.0 | 4.54e-01 | 100.0% | 56.6% |
| 3622456 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.60 | 41.0 | 4.17e-01 | 81.7% | 71.8% |
| None | — | 0.60 | 47.0 | 3.78e-01 | 100.0% | 42.2% | |
| 4143141 | 7588.1.1.1 ↗ | a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB | 0.58 | 39.0 | 4.35e-01 | 100.0% | 88.8% |
| 3281104 | 2007.1.4.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › DAGK_cat | 0.58 | 39.0 | 3.75e-01 | 96.5% | 59.2% |
| 3206658 | 2007.1.6.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › THF_DHG_CYH | 0.58 | 44.0 | 4.20e-01 | 98.3% | 68.9% |
| 5047978 | 7576.1.1.0 ↗ | a/b three-layered sandwiches › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain › Gingipain R extra N-terminal alpha/beta domain | 0.58 | 43.0 | 4.30e-01 | 98.3% | 75.8% |
| 3974680 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.57 | 47.0 | 4.03e-01 | 92.2% | 55.1% |
| 4117003 | 7550.1.1.1 ↗ | a/b three-layered sandwiches › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › TP_methylase | 0.57 | 42.0 | 4.22e-01 | 100.0% | 76.5% |
| 5037056 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.57 | 43.0 | 4.31e-01 | 100.0% | 77.5% |
| 3267471 | 2007.2.3.14 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Init_tRNA_PT | 0.57 | 41.0 | 3.64e-01 | 74.8% | 80.0% |
| 3256270 | 2007.1.6.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › THF_DHG_CYH | 0.57 | 43.0 | 4.03e-01 | 98.3% | 64.1% |
| 3691560 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.56 | 40.0 | 3.45e-01 | 100.0% | 46.5% |
| 4099758 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.55 | 38.0 | 3.00e-01 | 99.1% | 31.9% |
| 4265378 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.55 | 36.0 | 3.83e-01 | 93.0% | 74.8% |
| 3963019 | 2006.1.3.24 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › DUF3097_C | 0.55 | 41.0 | 3.47e-01 | 98.3% | 47.4% |
| 4356468 | 7591.1.1.1 ↗ | a/b three-layered sandwiches › Tetraacyldisaccharide 4'-kinase C-terminal domain › Tetraacyldisaccharide 4'-kinase C-terminal domain › Tetraacyldisaccharide 4'-kinase C-terminal domain › LpxK | 0.54 | 42.0 | 4.35e-01 | 100.0% | 89.5% |
| 1901477 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.54 | 35.0 | 3.67e-01 | 93.0% | 71.8% |
| 1522188 | 7523.1.1.26 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_6 | 0.53 | 34.0 | 3.54e-01 | 93.0% | 68.9% |
| 3784862 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.53 | 41.0 | 2.55e-01 | 83.5% | 89.0% |
| 2527000 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.53 | 37.0 | 3.63e-01 | 97.4% | 66.9% |
| 4129217 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.52 | 35.0 | 3.73e-01 | 93.0% | 77.8% |
| 5014627 | 2005.1.1.27 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueC | 0.52 | 42.0 | 3.47e-01 | 87.8% | 85.7% |
| 3744042 | 216.1.1.27 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › HGTP_anticodon2 | 0.52 | 35.0 | 3.25e-01 | 93.0% | 54.5% |
| 4930103 | 2004.1.1.231 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RNase_J_b_CASP | 0.51 | 46.0 | 4.00e-01 | 100.0% | 84.0% |
| 4249997 | 7591.1.1.1 ↗ | a/b three-layered sandwiches › Tetraacyldisaccharide 4'-kinase C-terminal domain › Tetraacyldisaccharide 4'-kinase C-terminal domain › Tetraacyldisaccharide 4'-kinase C-terminal domain › LpxK | 0.51 | 43.0 | 4.24e-01 | 100.0% | 89.2% |
| 3177337 | 7523.1.1.5 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PDT | 0.51 | 38.0 | 3.92e-01 | 100.0% | 86.7% |
| 3711081 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.51 | 45.0 | 3.45e-01 | 100.0% | 69.5% |
| 4980018 | 7574.1.1.0 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) | 0.50 | 45.0 | 3.83e-01 | 100.0% | 82.6% |