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MW865351.1__QZI86729.1__SIPHO019v1_100001__00001

Bact-Vir

MW865351.1__QZI86729.1__SIPHO019v1_100001__00001

Identity

Accession:
MW865351 ↗
Kingdom:
phage

Quality

81.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 38-165
PDB
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3e1sA04 2.30.30.940 Mainly Beta › Roll › SH3 type barrels. › 0.79 43.0 5.70e-01 88.3% 98.6%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 36.0 4.75e-01 91.4% 87.1%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 34.0 4.62e-01 86.7% 92.4%
7oc3A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 38.0 4.45e-01 72.7% 77.2%
5hmaA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 30.0 3.30e-01 75.0% 64.4%
2re3A02 2.30.270.10 Mainly Beta › Roll › duf1285 protein fold › duf1285 protein 0.52 27.0 3.35e-01 96.9% 85.7%
3njaA02 2.10.70.100 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.52 20.0 3.08e-01 71.1% 91.3%
5jmfA02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 39.0 3.07e-01 80.5% 63.5%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1746358 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.91 74.0 8.10e-01 90.6% 99.1%
3022070 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.91 78.0 8.25e-01 90.6% 99.1%
4101587 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.90 72.0 8.02e-01 89.1% 100.0%
2726885 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.88 74.0 7.91e-01 90.6% 99.1%
3023952 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 73.0 7.75e-01 88.3% 100.0%
3385654 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 71.0 7.35e-01 88.3% 100.0%
4347063 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.83 73.0 7.14e-01 91.4% 99.3%
3708644 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 71.0 7.48e-01 90.6% 100.0%
3251896 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.81 70.0 7.37e-01 90.6% 100.0%
3172952 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 68.0 5.92e-01 88.3% 98.9%
3517651 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 45.0 5.78e-01 88.3% 97.3%
3594062 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 68.0 6.47e-01 90.6% 98.6%
3610097 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.78 67.0 6.51e-01 90.6% 97.9%
3589606 4.1.1.109 beta barrels › SH3 › SH3 › SH3 › SH3_13 0.77 43.0 5.71e-01 84.4% 100.0%
3955235 4.1.1.183 beta barrels › SH3 › SH3 › SH3 › DUF4926 0.75 39.0 4.94e-01 82.8% 82.5%
3668420 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.74 71.0 6.05e-01 100.0% 70.0%
3416672 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 38.0 4.26e-01 74.2% 70.0%
3675120 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.68 38.0 4.66e-01 83.6% 84.7%
4117297 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 37.0 4.83e-01 89.8% 100.0%
3964560 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 35.0 4.70e-01 89.8% 98.6%
3958145 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 32.0 4.44e-01 84.4% 100.0%
4992590 881.2.1.0 a+b three layers › Mog1p/PsbP-like › TM1622-like › TM1622-like 0.56 36.0 3.22e-01 76.6% 46.3%
4966131 4.1.3.1 beta barrels › SH3 › SH3 › Calcium-binding protein CcbP › Calci_bind_CcbP 0.54 36.0 3.87e-01 82.0% 78.2%
4952498 4.11.1.1 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.51 36.0 4.14e-01 99.2% 94.9%
3510708 59.1.1.0 beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like 0.50 27.0 3.47e-01 100.0% 95.6%
D2 medium residues 1-29_170-219
PDB
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3upuA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 67.0 5.55e-01 92.4% 96.2%
5rl9B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 63.0 5.08e-01 100.0% 89.9%
3u4qA04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 62.0 4.25e-01 100.0% 85.6%
3dmnA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 61.0 4.83e-01 100.0% 87.0%
4a8jB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 42.0 3.14e-01 79.7% 58.2%
5unaD00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 40.0 3.00e-01 73.4% 80.0%
3jwhA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 39.0 3.05e-01 72.2% 76.4%
5umbA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.57 38.0 3.01e-01 70.9% 97.8%
4ritA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.56 43.0 3.18e-01 86.1% 64.8%
4kqcA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 38.0 3.13e-01 72.2% 86.3%
5l3qB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 39.0 2.93e-01 79.7% 98.7%
2hyiC02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 46.0 3.67e-01 97.5% 87.4%
4obvA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.54 42.0 3.09e-01 87.3% 62.2%
3rhfD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 40.0 2.76e-01 79.7% 25.4%
7zp2C02 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.53 37.0 3.06e-01 73.4% 85.9%
5dteA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 37.0 3.09e-01 74.7% 77.1%
3sggA02 3.20.20.490 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › GxGYxYP glycoside hydrolase, C-terminal domain 0.52 41.0 2.99e-01 89.9% 45.7%
2iw3A04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 42.0 3.09e-01 91.1% 88.5%
4rweA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 35.0 2.88e-01 72.2% 82.4%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3890170 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.88 83.0 6.68e-01 100.0% 77.1%
3610095 2004.1.1.298 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Herpes_Helicase 0.87 82.0 6.18e-01 100.0% 77.6%
3363137 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.87 82.0 6.66e-01 100.0% 78.5%
3600234 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.87 81.0 6.13e-01 100.0% 81.2%
3605939 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.87 82.0 6.66e-01 100.0% 82.2%
3267758 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.86 81.0 6.62e-01 100.0% 80.0%
3591776 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.86 80.0 6.26e-01 100.0% 83.2%
3789466 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.86 81.0 6.28e-01 100.0% 67.7%
3663731 2004.1.1.496 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 0.85 72.0 5.93e-01 89.9% 94.8%
3777141 2004.1.1.298 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Herpes_Helicase 0.85 81.0 6.40e-01 100.0% 71.0%
3882209 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.85 81.0 6.54e-01 100.0% 76.3%
3677902 219.1.1.16 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C48 0.85 74.0 4.29e-01 92.4% 20.7%
3682824 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.85 75.0 6.11e-01 93.7% 91.1%
3807611 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.85 79.0 6.17e-01 100.0% 89.7%
3682367 2004.1.1.496 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 0.84 74.0 6.05e-01 93.7% 94.8%
3680771 2004.1.1.135 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 0.84 78.0 5.30e-01 100.0% 60.8%
3648251 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.84 78.0 5.50e-01 100.0% 92.7%
3683589 2004.1.1.135 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 0.84 78.0 4.83e-01 100.0% 39.0%
3682236 2004.1.1.496 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 0.84 78.0 5.92e-01 100.0% 92.9%
3656784 2004.1.1.62 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 0.84 78.0 5.82e-01 100.0% 85.6%
3305691 2004.1.1.298 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Herpes_Helicase 0.84 78.0 6.10e-01 100.0% 91.6%
3676955 2004.1.1.203 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 0.84 78.0 5.89e-01 100.0% 90.2%
3316169 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.84 78.0 4.76e-01 100.0% 49.3%
3671414 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.84 78.0 5.80e-01 100.0% 96.1%
3370015 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.83 78.0 5.82e-01 100.0% 78.7%
3372759 2004.1.1.135 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 0.83 77.0 5.20e-01 100.0% 51.5%
3601738 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.83 78.0 6.51e-01 100.0% 78.4%
3242523 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.83 77.0 6.39e-01 100.0% 92.3%
3658525 2004.1.1.62 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 0.83 74.0 6.03e-01 96.2% 92.9%
3362146 2004.1.1.135 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 0.83 77.0 5.57e-01 100.0% 70.0%
3719002 2004.1.1.203 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 0.82 77.0 6.28e-01 100.0% 77.0%
3372829 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.81 75.0 6.00e-01 98.7% 97.2%
3596401 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.81 75.0 6.18e-01 100.0% 77.0%
3662519 2004.1.1.62 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 0.80 75.0 6.88e-01 100.0% 86.0%
4610954 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.80 75.0 6.47e-01 100.0% 87.0%
3336111 2004.1.1.869 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Pif1_2B_dom 0.77 71.0 5.20e-01 100.0% 94.4%
3307009 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 62.0 5.16e-01 89.9% 91.8%
3679203 2004.1.1.135 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 0.71 55.0 4.30e-01 83.5% 68.2%
3558535 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 60.0 4.56e-01 93.7% 95.0%
None 0.69 64.0 4.33e-01 100.0% 52.6%
3710008 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 63.0 4.99e-01 100.0% 65.8%
2132278 2004.1.1.99 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N 0.68 49.0 3.54e-01 77.2% 66.1%
3899696 2004.1.1.161 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TmcA_N 0.67 49.0 3.60e-01 78.5% 76.7%
3164108 2004.1.1.161 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TmcA_N 0.66 48.0 4.15e-01 77.2% 82.4%
4988088 2004.1.1.99 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N 0.65 47.0 3.37e-01 75.9% 61.7%
3942672 2004.1.1.99 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N 0.65 47.0 3.47e-01 78.5% 63.6%
1567474 2004.1.1.99 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N 0.64 47.0 3.28e-01 77.2% 61.2%
3942031 2004.1.1.102 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TerL_ATPase 0.63 47.0 3.19e-01 81.0% 45.6%
4031261 2004.1.1.102 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TerL_ATPase 0.61 45.0 3.07e-01 81.0% 45.5%
5082826 2004.1.1.117 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_3 0.60 45.0 3.27e-01 81.0% 67.2%
4593845 2004.1.1.429 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 0.60 44.0 2.87e-01 79.7% 89.4%
3791564 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.59 40.0 3.39e-01 70.9% 77.9%
4145191 2003.1.5.53 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr 0.57 44.0 2.86e-01 84.8% 81.8%
387613 2003.1.14.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Aspartate/ornithine carbamoyltransferase › OTCace 0.56 38.0 3.03e-01 70.9% 64.8%
3613818 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.55 47.0 3.63e-01 96.2% 100.0%
D3 medium residues 224-270
PDB