Back to structures

MW879340.1__QXO10715.1__pEaSNUABM48_00247__00245

Bact-Vir

MW879340.1__QXO10715.1__pEaSNUABM48_00247__00245

Identity

Accession:
MW879340 ↗
Kingdom:
phage

Quality

77.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-119
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1w98B02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.68 40.0 4.15e-01 78.0% 60.5%
4d9uA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 26.0 2.99e-01 100.0% 50.0%
2rq1A00 1.20.80.10 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › 0.61 34.0 3.57e-01 78.0% 58.7%
1f5qB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.59 35.0 3.38e-01 72.9% 49.3%
2kiwA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.59 42.0 4.76e-01 74.6% 100.0%
2vz6B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 27.0 3.12e-01 100.0% 59.0%
1hm7B00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.57 41.0 3.10e-01 75.4% 45.9%
5nx5B00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.57 40.0 3.11e-01 74.6% 45.5%
4citA00 1.10.606.20 Mainly Alpha › Orthogonal Bundle › Vanadium-containing Chloroperoxidase; domain 2 › 0.56 49.0 3.43e-01 98.3% 58.5%
2wiyA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.55 47.0 3.29e-01 94.9% 66.2%
2ot4A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.55 29.0 3.07e-01 78.8% 56.1%
1gcvA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.54 37.0 3.57e-01 71.2% 68.6%
1qv9A02 6.10.140.120 Special › Helix non-globular › Helix Hairpins › 0.53 31.0 3.35e-01 76.3% 65.0%
4hteA01 1.20.58.1730 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 46.0 4.34e-01 98.3% 87.4%
2wy4A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.51 37.0 3.57e-01 78.0% 70.5%
7p2yd01 1.10.520.20 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase 0.50 38.0 4.02e-01 93.2% 94.9%
1dpbA00 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.50 45.0 3.60e-01 100.0% 72.0%
2h4pA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.50 40.0 3.26e-01 89.0% 99.2%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4449404 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.64 44.0 3.57e-01 71.2% 72.3%
3815745 592.6.1.1 alpha arrays › PWI domain-like › Pre-mRNA-splicing helicase BRR2 plug domain › Pre-mRNA-splicing helicase BRR2 plug domain › BRR2_plug 0.63 42.0 4.91e-01 72.9% 100.0%
3180704 592.6.1.1 alpha arrays › PWI domain-like › Pre-mRNA-splicing helicase BRR2 plug domain › Pre-mRNA-splicing helicase BRR2 plug domain › BRR2_plug 0.63 46.0 4.70e-01 81.4% 79.1%
4203130 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.62 35.0 3.61e-01 73.7% 57.4%
3335336 5050.1.1.0 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.61 45.0 3.67e-01 78.8% 89.1%
3589948 195.1.1.1 alpha complex topology › NusB-like › NusB-like › NusB-like › NusB 0.60 41.0 3.89e-01 93.2% 57.9%
3693269 101.1.1.207 alpha arrays › HTH › HTH › Three-helical HTH › DUF6581 0.57 43.0 4.40e-01 79.7% 96.5%
2410023 141.1.1.8 alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_syn_C_2 0.57 41.0 3.06e-01 75.4% 44.6%
4949396 606.1.1.0 alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain 0.56 33.0 3.72e-01 81.4% 76.7%
4202384 192.7.1.3 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Phe_tRNA-synt_N 0.56 31.0 3.47e-01 75.4% 68.4%
3249649 5059.1.1.3 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › TPT 0.55 48.0 3.57e-01 98.3% 83.8%
3783120 1188.1.1.1 alpha bundles › ZIP zinc transporter › ZIP zinc transporter › ZIP zinc transporter › Zip 0.55 40.0 3.21e-01 77.1% 42.6%
3219029 106.1.1.1 alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.55 39.0 3.56e-01 74.6% 67.7%
3870735 601.25.1.5 alpha bundles › Four-helical up-and-down bundle › TrmE connector domain › TrmE connector domain › OPA1_C 0.54 40.0 4.00e-01 78.0% 83.2%
4982919 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.52 35.0 3.58e-01 74.6% 70.4%
3796774 5059.1.1.34 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA, Nuc_sug_transp 0.52 45.0 3.36e-01 100.0% 93.4%
3918080 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.52 34.0 3.64e-01 87.3% 77.0%
3815356 171.1.1.4 alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonucleas_3_3 0.51 46.0 3.72e-01 100.0% 77.9%
5030693 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 39.0 4.14e-01 90.7% 92.4%
4029 620.1.1.0 alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases 0.51 35.0 3.33e-01 94.1% 58.5%
3407923 192.24.1.1 alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain › RPC3_helical 0.51 33.0 3.54e-01 73.7% 76.0%
5004226 1075.1.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane 0.51 37.0 2.91e-01 75.4% 55.4%