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MW879341.1__QXO10940.1__pEaSNUABM54_00114__00114
Bact-VirMW879341.1__QXO10940.1__pEaSNUABM54_00114__00114
Identity
- Accession:
- MW879341 ↗
- Kingdom:
- phage
Quality
74.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-70
Domain cluster:
rep: MF063068.1__ARV77298.1__NOXIFER_129__00129__D7-64
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qggA02 | 2.30.30.240 | Mainly Beta › Roll › SH3 type barrels. › PRC-barrel domain | 0.65 | 49.0 | 4.53e-01 | 100.0% | 62.7% |
| 3wa2X01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 53.0 | 4.90e-01 | 100.0% | 73.6% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 43.0 | 4.04e-01 | 100.0% | 58.0% |
| 6grrA03 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 50.0 | 4.40e-01 | 100.0% | 75.5% |
| 1ne3A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 39.0 | 3.87e-01 | 79.7% | 63.2% |
| 3wa2X02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 50.0 | 4.40e-01 | 100.0% | 77.5% |
| 3q91B00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.58 | 49.0 | 3.86e-01 | 93.8% | 58.0% |
| 4g6vB00 | 3.30.70.2920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 49.0 | 4.17e-01 | 93.8% | 75.7% |
| 3t4nA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.57 | 38.0 | 3.36e-01 | 100.0% | 44.8% |
| 1g19A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 49.0 | 3.45e-01 | 100.0% | 80.4% |
| 2dkhA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 50.0 | 3.32e-01 | 100.0% | 52.5% |
| 1sjwA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 48.0 | 3.72e-01 | 100.0% | 71.8% |
| 4l3aA05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 42.0 | 3.99e-01 | 100.0% | 71.2% |
| 5b3pA00 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.54 | 43.0 | 3.55e-01 | 95.3% | 46.3% |
| 2bi0A02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 41.0 | 3.18e-01 | 85.9% | 59.2% |
| 2x8fA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 45.0 | 2.91e-01 | 100.0% | 24.9% |
| 4e72A01 | 3.30.565.40 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like | 0.52 | 45.0 | 3.66e-01 | 100.0% | 68.5% |
| 1nycA00 | 2.40.310.10 | Mainly Beta › Beta Barrel › Staphostatins › beta-Barrel protease inhibitors | 0.51 | 42.0 | 3.53e-01 | 100.0% | 53.2% |
| 1jkfA03 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.51 | 40.0 | 4.10e-01 | 100.0% | 95.0% |
| 4gj4D00 | 3.30.450.260 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem NO binding associated domain | 0.51 | 42.0 | 3.55e-01 | 96.9% | 68.4% |
| 3i4hX01 | 3.30.70.1890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 42.0 | 3.46e-01 | 100.0% | 64.8% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4586356 | 220.1.1.81 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF2550 | 0.71 | 60.0 | 4.74e-01 | 95.3% | 66.7% |
| 3958057 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.71 | 60.0 | 4.72e-01 | 95.3% | 66.7% |
| 4023778 | 206.1.1.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase | 0.68 | 58.0 | 3.61e-01 | 100.0% | 16.8% |
| 4029316 | 11.2.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › YEATS | 0.65 | 44.0 | 3.32e-01 | 70.3% | 44.4% |
| 3210879 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.65 | 46.0 | 5.09e-01 | 79.7% | 96.0% |
| 3600113 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.62 | 54.0 | 3.72e-01 | 100.0% | 39.1% |
| 3670792 | 243.3.1.67 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Phytochelatin_C | 0.62 | 52.0 | 5.24e-01 | 100.0% | 93.8% |
| 5006562 | 2008.1.1.178 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NA-iREase1 | 0.61 | 46.0 | 3.61e-01 | 100.0% | 35.5% |
| 6428 | 243.5.1.2 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › Cu_amine_oxidN3 | 0.60 | 50.0 | 4.26e-01 | 100.0% | 69.6% |
| 2772552 | 243.5.1.2 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › Cu_amine_oxidN3 | 0.60 | 50.0 | 4.21e-01 | 100.0% | 62.5% |
| 3544717 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.59 | 42.0 | 3.25e-01 | 76.6% | 80.7% |
| 3676791 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 42.0 | 4.06e-01 | 82.8% | 66.7% |
| 3187360 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 46.0 | 3.20e-01 | 85.9% | 36.1% |
| 4142315 | 883.1.1.19 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › PF26544 | 0.58 | 49.0 | 3.44e-01 | 98.4% | 57.7% |
| 3516854 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 50.0 | 4.18e-01 | 100.0% | 73.9% |
| 3214812 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.57 | 40.0 | 3.64e-01 | 82.8% | 52.1% |
| None | — | 0.56 | 50.0 | 3.53e-01 | 100.0% | 83.8% | |
| 4951631 | 243.3.1.37 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF4901 | 0.56 | 49.0 | 4.06e-01 | 100.0% | 56.5% |
| 4038118 | 2003.1.2.102 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3, Pyr_redox_2 | 0.55 | 48.0 | 2.87e-01 | 100.0% | 36.7% |
| 5000455 | 523.1.1.3 ↗ | a+b two layers › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › PF29994 | 0.55 | 47.0 | 3.81e-01 | 100.0% | 49.6% |
| 4961766 | 241.15.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › Spo0M | 0.55 | 44.0 | 3.81e-01 | 96.9% | 53.9% |
| 4160166 | 222.1.1.17 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N | 0.55 | 41.0 | 3.22e-01 | 82.8% | 59.3% |
| 4947993 | 283.2.1.19 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › NMD3 | 0.55 | 48.0 | 4.04e-01 | 100.0% | 61.8% |
| 3695678 | 3924.1.1.0 ↗ | alpha complex topology › Sterol uptake control protein 2 › Sterol uptake control protein 2 › Sterol uptake control protein 2 | 0.55 | 47.0 | 2.88e-01 | 100.0% | 22.3% |
| 4000026 | 2.1.1.179 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REV3_N | 0.55 | 40.0 | 4.34e-01 | 79.7% | 100.0% |
| 2130817 | 881.1.1.2 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1 | 0.54 | 45.0 | 3.35e-01 | 98.4% | 37.6% |
| 3183987 | 331.3.1.30 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF3074 | 0.54 | 45.0 | 2.96e-01 | 96.9% | 28.7% |
| 3482507 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.54 | 47.0 | 2.85e-01 | 100.0% | 15.1% |
| 3605788 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.54 | 45.0 | 3.65e-01 | 100.0% | 92.9% |
| 4026754 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 45.0 | 3.62e-01 | 96.9% | 73.3% |
| 1868022 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.54 | 43.0 | 3.55e-01 | 95.3% | 46.3% |
| 3444419 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.53 | 45.0 | 3.94e-01 | 96.9% | 65.0% |
| 3231318 | 11.1.1.673 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CUT_N | 0.52 | 45.0 | 3.89e-01 | 100.0% | 83.8% |
| 4027838 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 46.0 | 3.99e-01 | 98.4% | 78.9% |
| 3437883 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 44.0 | 4.01e-01 | 96.9% | 72.9% |
| 3697944 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.50 | 39.0 | 3.00e-01 | 84.4% | 55.2% |
| 3334635 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.50 | 41.0 | 3.14e-01 | 100.0% | 80.6% |
D2
high
residues 74-149
Domain cluster:
rep: LC667451.1__BDD79839.1__X__00320__D73-157
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5gaeH01 | 3.10.430.100 | Alpha Beta › Roll › Ribosomal Protein L9; domain 2 › Ribosomal protein L9, C-terminal domain | 0.63 | 55.0 | 5.47e-01 | 100.0% | 96.2% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 40.0 | 4.36e-01 | 78.9% | 85.5% |
| 2kuqA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 48.0 | 3.86e-01 | 94.7% | 43.8% |
| 1xr0B01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 48.0 | 4.55e-01 | 96.1% | 73.6% |
| 2e6zA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 37.0 | 4.10e-01 | 76.3% | 81.4% |
| 2jzkA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.58 | 43.0 | 3.95e-01 | 80.3% | 87.4% |
| 6v06A01 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.57 | 35.0 | 3.80e-01 | 78.9% | 74.2% |
| 2o3oA02 | 3.30.310.160 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › YycH protein, domain 2 | 0.57 | 49.0 | 4.31e-01 | 100.0% | 91.7% |
| 1jcfA03 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.55 | 39.0 | 3.91e-01 | 72.4% | 90.8% |
| 2grvA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.55 | 49.0 | 3.76e-01 | 100.0% | 54.0% |
| 2k1gA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.54 | 42.0 | 3.59e-01 | 86.8% | 95.3% |
| 3kf8B00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 37.0 | 3.18e-01 | 100.0% | 45.8% |
| 4fajA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 46.0 | 3.66e-01 | 100.0% | 56.0% |
| 2fgtA03 | 3.30.310.160 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › YycH protein, domain 2 | 0.53 | 46.0 | 3.86e-01 | 100.0% | 83.0% |
| 2yzyA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.53 | 37.0 | 2.85e-01 | 77.6% | 33.7% |
| 3cgbA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 39.0 | 3.04e-01 | 80.3% | 46.4% |
| 3r9bA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.52 | 43.0 | 2.86e-01 | 100.0% | 68.3% |
| 1h5zA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.52 | 43.0 | 2.81e-01 | 100.0% | 69.8% |
| 4oddA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 44.0 | 3.61e-01 | 100.0% | 63.1% |
| 1k8kA04 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.51 | 35.0 | 3.37e-01 | 73.7% | 85.9% |
| 1dzkA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 43.0 | 3.57e-01 | 100.0% | 65.5% |
| 6j5cA02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.50 | 32.0 | 3.12e-01 | 71.1% | 56.6% |
| 6bu2A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.50 | 34.0 | 2.80e-01 | 100.0% | 36.0% |
| 3wjcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 42.0 | 3.39e-01 | 94.7% | 68.0% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4197431 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 57.0 | 5.82e-01 | 94.7% | 98.6% |
| 4416594 | 523.1.1.1 ↗ | a+b two layers › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal_L9_C | 0.64 | 56.0 | 5.12e-01 | 100.0% | 74.0% |
| 3316533 | 523.1.1.0 ↗ | a+b two layers › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain | 0.64 | 56.0 | 5.11e-01 | 100.0% | 87.6% |
| 4089525 | 523.1.1.1 ↗ | a+b two layers › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal_L9_C | 0.64 | 55.0 | 5.23e-01 | 100.0% | 82.2% |
| 3255807 | 523.1.1.0 ↗ | a+b two layers › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain | 0.64 | 57.0 | 5.39e-01 | 100.0% | 85.6% |
| 3835163 | 523.1.1.1 ↗ | a+b two layers › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal_L9_C | 0.64 | 56.0 | 5.07e-01 | 100.0% | 90.5% |
| 4423587 | 523.1.1.1 ↗ | a+b two layers › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal_L9_C | 0.63 | 55.0 | 5.30e-01 | 100.0% | 84.4% |
| 4583863 | 523.1.1.1 ↗ | a+b two layers › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal_L9_C | 0.63 | 55.0 | 5.09e-01 | 100.0% | 80.6% |
| 4588021 | 523.1.1.1 ↗ | a+b two layers › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal_L9_C | 0.62 | 54.0 | 4.88e-01 | 100.0% | 73.3% |
| 3612092 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 41.0 | 4.21e-01 | 71.1% | 92.0% |
| 3703932 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 40.0 | 4.40e-01 | 76.3% | 88.3% |
| 4679966 | 3894.1.1.5 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › MORN_DRC7 | 0.60 | 36.0 | 3.53e-01 | 75.0% | 54.1% |
| 3598283 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 41.0 | 3.50e-01 | 80.3% | 43.1% |
| 167441 | 705.1.1.1 ↗ | beta duplicates or obligate multimers › Cyanovirin-N › Cyanovirin-N › Cyanovirin-N › CVNH | 0.58 | 43.0 | 3.95e-01 | 80.3% | 87.4% |
| 5019669 | 7523.1.1.3 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 | 0.56 | 49.0 | 3.82e-01 | 100.0% | 54.3% |
| 4962846 | 7523.1.1.3 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 | 0.56 | 49.0 | 3.84e-01 | 100.0% | 51.7% |
| 3407322 | 220.1.1.52 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SNX17_FERM_C | 0.56 | 46.0 | 4.28e-01 | 98.7% | 70.0% |
| 3922964 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.56 | 41.0 | 2.57e-01 | 77.6% | 31.3% |
| 3692668 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 42.0 | 2.64e-01 | 78.9% | 18.2% |
| 4950477 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.55 | 36.0 | 3.71e-01 | 100.0% | 68.0% |
| 5017760 | 7523.1.1.3 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_5 | 0.55 | 48.0 | 3.83e-01 | 100.0% | 53.1% |
| 3444546 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 39.0 | 2.67e-01 | 76.3% | 20.3% |
| 3952348 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.55 | 48.0 | 3.66e-01 | 100.0% | 52.4% |
| 3183973 | 10.1.1.26 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C | 0.54 | 37.0 | 2.99e-01 | 80.3% | 35.5% |
| 3255741 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.53 | 39.0 | 3.02e-01 | 78.9% | 35.0% |
| 4011327 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.53 | 40.0 | 2.49e-01 | 88.2% | 57.6% |
| 4951171 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.52 | 36.0 | 3.75e-01 | 100.0% | 78.6% |
| 3784283 | 319.1.1.6 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › Pih1_fungal_CS | 0.52 | 39.0 | 3.81e-01 | 100.0% | 73.5% |
| 3706223 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 43.0 | 3.89e-01 | 93.4% | 71.4% |
| 2833544 | 10.1.1.26 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C | 0.51 | 38.0 | 3.02e-01 | 78.9% | 47.1% |
| 3286168 | 881.1.1.27 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF7373_C | 0.51 | 37.0 | 3.04e-01 | 78.9% | 68.4% |
| 3929799 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.51 | 42.0 | 4.25e-01 | 100.0% | 93.3% |
| 3476018 | 220.1.1.155 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26658 | 0.51 | 40.0 | 3.48e-01 | 88.2% | 53.7% |
| 3698212 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.51 | 40.0 | 2.65e-01 | 86.8% | 31.4% |
| 3629452 | 101.1.2.98 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDT1 | 0.50 | 39.0 | 2.98e-01 | 84.2% | 81.6% |
| 5026083 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.50 | 43.0 | 3.41e-01 | 100.0% | 71.4% |
D3
high
residues 183-275
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF25613.2 best | DUF7941 | 39.5 | 6.30e-10 | 100.0% | 32.7% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4o8sA01 | 3.10.450.620 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › JHP933, nucleotidyltransferase-like core domain | 0.65 | 41.0 | 3.76e-01 | 100.0% | 48.0% |
| 3qcmA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.63 | 44.0 | 3.06e-01 | 100.0% | 23.1% |
| 4qunA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.61 | 43.0 | 3.02e-01 | 100.0% | 23.7% |
| 3mcrA00 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.59 | 39.0 | 3.30e-01 | 100.0% | 40.3% |
| 1u7iA01 | 3.30.720.100 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.59 | 36.0 | 4.23e-01 | 100.0% | 87.9% |
| 1ki1B02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 38.0 | 3.39e-01 | 81.7% | 45.1% |
| 7arcC01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.57 | 37.0 | 3.30e-01 | 100.0% | 45.2% |
| 5b3pA00 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.57 | 40.0 | 3.53e-01 | 100.0% | 50.0% |
| 6fgjA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.56 | 40.0 | 3.38e-01 | 100.0% | 45.3% |
| 3p8aA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.56 | 35.0 | 3.02e-01 | 100.0% | 36.9% |
| 2be3B01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.55 | 39.0 | 3.48e-01 | 100.0% | 51.1% |
| 2r4iA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 45.0 | 4.16e-01 | 91.4% | 77.2% |
| 2gexA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 44.0 | 3.86e-01 | 91.4% | 70.5% |
| 3rgaA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 44.0 | 3.95e-01 | 93.5% | 75.9% |
| 4b0bB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 42.0 | 3.55e-01 | 90.3% | 77.5% |
| 8t5tA01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.52 | 40.0 | 3.27e-01 | 83.9% | 74.6% |
| 6p3qA02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.51 | 43.0 | 3.72e-01 | 97.8% | 78.5% |
| 3r0qA02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.50 | 45.0 | 3.48e-01 | 100.0% | 73.1% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3542147 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.58 | 34.0 | 3.02e-01 | 71.0% | 38.6% |
| 3352390 | 5.1.4.508 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30952 | 0.57 | 34.0 | 2.40e-01 | 82.8% | 18.0% |
| 3258155 | 804.1.1.3 ↗ | a+b four layers › Hypothetical protein YwqG › Hypothetical protein YwqG › Hypothetical protein YwqG › PDCD2_C, PF30657 | 0.55 | 43.0 | 3.49e-01 | 90.3% | 42.9% |
| 3600113 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.55 | 46.0 | 3.50e-01 | 94.6% | 38.7% |
| 3204249 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.53 | 38.0 | 2.55e-01 | 92.5% | 17.1% |
| 5044388 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 30.0 | 3.68e-01 | 86.0% | 100.0% |
| 4388144 | 222.1.1.5 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › FabA | 0.53 | 41.0 | 3.47e-01 | 87.1% | 76.3% |
| 3174353 | 5.1.4.573 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30151 | 0.52 | 39.0 | 2.59e-01 | 93.5% | 18.1% |
| 4863479 | 2003.1.2.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 | 0.51 | 46.0 | 3.60e-01 | 100.0% | 86.6% |