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MW879341.1__QXO10989.1__pEaSNUABM54_00163__00163
Bact-VirMW879341.1__QXO10989.1__pEaSNUABM54_00163__00163
Identity
- Accession:
- MW879341 ↗
- Kingdom:
- phage
Quality
94.4
mean pLDDT
Cluster
View cluster (14 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-152
Domain cluster:
rep: NC_071007.1__YP_010676000.1__PQD16_gp011__00227__D20-147
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01966.29 best | HD | 29.0 | 1.60e-06 | 72.9% | 75.9% |
| PF00233.26 | PDEase_I | 27.9 | 2.60e-06 | 46.4% | 28.1% |
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3dynA00 | 1.10.1300.10 | Mainly Alpha › Orthogonal Bundle › Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b › 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain | 0.80 | 75.0 | 5.71e-01 | 100.0% | 67.4% |
| 3ecmA00 | 1.10.1300.10 | Mainly Alpha › Orthogonal Bundle › Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b › 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain | 0.80 | 75.0 | 5.64e-01 | 100.0% | 72.2% |
| 1tazA00 | 1.10.1300.10 | Mainly Alpha › Orthogonal Bundle › Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b › 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain | 0.79 | 74.0 | 5.66e-01 | 100.0% | 67.4% |
| 1f0jA00 | 1.10.1300.10 | Mainly Alpha › Orthogonal Bundle › Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b › 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain | 0.79 | 74.0 | 5.49e-01 | 100.0% | 65.2% |
| 2o8hA00 | 1.10.1300.10 | Mainly Alpha › Orthogonal Bundle › Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b › 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain | 0.78 | 73.0 | 5.69e-01 | 100.0% | 70.7% |
| 1zklA00 | 1.10.1300.10 | Mainly Alpha › Orthogonal Bundle › Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b › 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain | 0.78 | 73.0 | 5.61e-01 | 100.0% | 69.7% |
| 4r8zA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.71 | 58.0 | 5.09e-01 | 86.1% | 94.5% |
| 1u6zA03 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.71 | 59.0 | 6.00e-01 | 87.4% | 97.3% |
| 2q14B01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.67 | 63.0 | 5.37e-01 | 100.0% | 69.5% |
| 2mx8A01 | 1.10.274.70 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain | 0.63 | 44.0 | 5.01e-01 | 72.2% | 100.0% |
| 3kh1A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.62 | 50.0 | 4.59e-01 | 85.4% | 67.7% |
| 2e9fB01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.58 | 32.0 | 3.94e-01 | 74.2% | 84.4% |
| 1cpcB00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.56 | 38.0 | 3.69e-01 | 76.8% | 61.0% |
| 2hsbA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.55 | 35.0 | 3.75e-01 | 85.4% | 73.8% |
| 7e4nA01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.54 | 45.0 | 3.75e-01 | 90.7% | 93.2% |
| 4fx0A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 33.0 | 3.58e-01 | 97.4% | 74.6% |
| 6wk3A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 38.0 | 3.93e-01 | 75.5% | 83.4% |
| 1hbkA00 | 1.20.80.10 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.52 | 28.0 | 3.47e-01 | 95.4% | 85.4% |
| 3tl4X01 | 1.10.8.1290 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1, domain 1 | 0.51 | 36.0 | 4.02e-01 | 90.1% | 96.5% |
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.51 | 31.0 | 3.61e-01 | 73.5% | 87.3% |
| 4dxwB01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.51 | 27.0 | 3.05e-01 | 72.8% | 66.1% |
| 4mn0A00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.50 | 40.0 | 3.78e-01 | 83.4% | 77.3% |
| 1jswA01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.50 | 34.0 | 3.54e-01 | 74.8% | 74.5% |
| 3k3uA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 36.0 | 3.78e-01 | 74.2% | 98.5% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3762694 | 131.1.1.1 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › PDEase_I | 0.79 | 75.0 | 5.40e-01 | 100.0% | 61.5% |
| 4946156 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.79 | 65.0 | 5.39e-01 | 85.4% | 88.8% |
| 3498981 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.79 | 74.0 | 5.09e-01 | 100.0% | 48.2% |
| 3480640 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.79 | 74.0 | 5.76e-01 | 100.0% | 74.8% |
| None | — | 0.79 | 74.0 | 5.55e-01 | 100.0% | 67.4% | |
| None | — | 0.79 | 74.0 | 5.11e-01 | 100.0% | 49.8% | |
| 392664 | 131.1.1.1 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › PDEase_I | 0.78 | 73.0 | 5.49e-01 | 100.0% | 65.2% |
| 2319365 | 131.1.1.8 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › SidE_PDE | 0.78 | 68.0 | 5.25e-01 | 91.4% | 74.1% |
| None | — | 0.78 | 73.0 | 5.07e-01 | 100.0% | 48.8% | |
| 3273356 | 131.1.1.1 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › PDEase_I | 0.78 | 73.0 | 5.38e-01 | 100.0% | 62.4% |
| 5002186 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.78 | 66.0 | 5.37e-01 | 88.1% | 86.9% |
| 3909429 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.77 | 72.0 | 5.65e-01 | 100.0% | 76.8% |
| 5052181 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.77 | 62.0 | 5.52e-01 | 84.1% | 61.5% |
| 2702879 | 131.1.1.1 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › PDEase_I | 0.77 | 72.0 | 5.49e-01 | 100.0% | 65.7% |
| 4026850 | 131.1.1.1 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › PDEase_I | 0.77 | 72.0 | 5.36e-01 | 100.0% | 62.6% |
| 3449702 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.76 | 65.0 | 5.59e-01 | 88.7% | 60.7% |
| 3707358 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.75 | 63.0 | 5.45e-01 | 88.1% | 67.1% |
| 4418033 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.75 | 71.0 | 4.96e-01 | 100.0% | 42.4% |
| 5062324 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.75 | 63.0 | 5.69e-01 | 88.7% | 86.5% |
| 4558880 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.75 | 70.0 | 4.97e-01 | 100.0% | 42.9% |
| 4947535 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.74 | 62.0 | 5.77e-01 | 87.4% | 80.0% |
| 4951316 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.74 | 66.0 | 5.97e-01 | 95.4% | 85.5% |
| 3260673 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.74 | 62.0 | 5.44e-01 | 88.7% | 65.0% |
| 3600875 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.74 | 63.0 | 5.13e-01 | 90.7% | 61.1% |
| 5045848 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.74 | 54.0 | 4.85e-01 | 96.7% | 56.2% |
| 5010712 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.72 | 68.0 | 4.88e-01 | 100.0% | 46.5% |
| 3480803 | 131.1.1.1 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › PDEase_I | 0.71 | 63.0 | 5.35e-01 | 94.7% | 77.9% |
| 3487911 | 3954.1.1.0 ↗ | alpha arrays › Phosphodiesterase 4 upstream conserved regions (UCR) › Phosphodiesterase 4 upstream conserved regions (UCR) › Phosphodiesterase 4 upstream conserved regions (UCR) | 0.70 | 65.0 | 5.03e-01 | 99.3% | 63.4% |
| 5063326 | 131.1.1.15 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › Ppx-GppA_III | 0.70 | 57.0 | 5.12e-01 | 85.4% | 68.5% |
| 3960650 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.70 | 59.0 | 5.33e-01 | 90.7% | 69.8% |
| 4324950 | 131.1.1.24 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › tRNA_synt_2f | 0.70 | 55.0 | 4.59e-01 | 82.1% | 67.6% |
| 4370889 | 131.1.1.24 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › tRNA_synt_2f | 0.70 | 55.0 | 4.54e-01 | 82.1% | 66.7% |
| 4408293 | 131.1.1.24 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › tRNA_synt_2f | 0.69 | 55.0 | 4.37e-01 | 82.1% | 60.7% |
| 3989681 | 304.20.1.5 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › tRNA_synt_2f | 0.68 | 54.0 | 4.65e-01 | 82.1% | 79.6% |
| 4456310 | 131.2.1.3 ↗ | alpha complex topology › PDEase-like › Poly A polymerase C-terminal region-like › Poly A polymerase C-terminal region-like › PolyA_pol_RNAbd | 0.63 | 58.0 | 4.75e-01 | 100.0% | 73.5% |
| 3718570 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.62 | 44.0 | 4.71e-01 | 90.7% | 86.4% |
| 3602540 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.57 | 37.0 | 3.91e-01 | 86.8% | 72.6% |
| 4969920 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.55 | 35.0 | 3.79e-01 | 86.1% | 73.1% |
| 2793944 | 141.1.1.8 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_syn_C_2 | 0.53 | 44.0 | 3.61e-01 | 90.7% | 92.0% |
| 3991803 | 5059.1.1.34 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA, Nuc_sug_transp | 0.51 | 36.0 | 2.86e-01 | 71.5% | 67.8% |
D2
high
residues 156-223
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rq9A00 | 1.10.287.2500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.83 | 54.0 | 5.18e-01 | 75.0% | 59.0% |
| 2ix5A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.77 | 55.0 | 4.17e-01 | 75.0% | 33.5% |
| 3na7A00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.77 | 55.0 | 3.73e-01 | 75.0% | 43.5% |
| 2jdiG01 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.76 | 54.0 | 5.65e-01 | 94.1% | 82.0% |
| 3a8pA02 | 6.10.140.680 | Special › Helix non-globular › Helix Hairpins › | 0.76 | 54.0 | 4.52e-01 | 75.0% | 53.5% |
| 3b2eF00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.75 | 53.0 | 5.57e-01 | 75.0% | 80.6% |
| 4fvmA06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.71 | 43.0 | 4.83e-01 | 73.5% | 83.3% |
| 1orjD00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.69 | 49.0 | 4.01e-01 | 75.0% | 43.2% |
| 5dn6J00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.69 | 48.0 | 4.69e-01 | 73.5% | 70.3% |
| 2v6yA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.69 | 57.0 | 5.49e-01 | 95.6% | 80.0% |
| 2oh3A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.68 | 59.0 | 4.63e-01 | 97.1% | 89.6% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.67 | 46.0 | 4.27e-01 | 73.5% | 75.6% |
| 3eslA01 | 1.20.58.2070 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 50.0 | 4.91e-01 | 95.6% | 74.7% |
| 7zmgL01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 51.0 | 4.93e-01 | 85.3% | 82.5% |
| 2ynqB00 | 1.25.40.680 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type VII secretion system EssB, C-terminal-like domain | 0.65 | 49.0 | 3.90e-01 | 83.8% | 48.3% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.65 | 45.0 | 4.57e-01 | 73.5% | 91.0% |
| 3l9fA02 | 6.10.140.1570 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 57.0 | 5.36e-01 | 98.5% | 95.1% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 43.0 | 4.48e-01 | 73.5% | 82.3% |
| 4wzxA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.62 | 50.0 | 4.85e-01 | 95.6% | 81.3% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.62 | 50.0 | 4.53e-01 | 92.6% | 66.0% |
| 2mtqA00 | 1.20.58.130 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 53.0 | 5.17e-01 | 98.5% | 86.3% |
| 3kr9A02 | 1.10.287.1890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 48.0 | 5.06e-01 | 92.6% | 95.1% |
| 1chuA03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.60 | 50.0 | 4.60e-01 | 97.1% | 70.5% |
| 1j1jA02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.60 | 50.0 | 4.72e-01 | 100.0% | 76.5% |
| 2a26B01 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.60 | 38.0 | 4.20e-01 | 82.4% | 97.7% |
| 3gnlB02 | 1.10.287.1890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 50.0 | 5.07e-01 | 92.6% | 94.1% |
| 2rpaA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.59 | 48.0 | 4.72e-01 | 97.1% | 83.1% |
| 2ewfA02 | 1.20.1270.310 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.59 | 42.0 | 4.06e-01 | 77.9% | 66.7% |
| 3nz4B03 | 1.10.274.20 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 | 0.56 | 47.0 | 4.20e-01 | 100.0% | 85.6% |
| 2wzvA01 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.55 | 40.0 | 2.85e-01 | 77.9% | 43.1% |
| 2wzkA01 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.55 | 45.0 | 3.77e-01 | 95.6% | 76.4% |
| 2hqtK00 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 40.0 | 3.46e-01 | 82.4% | 71.8% |
| 3kfwX03 | 1.20.58.1460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 41.0 | 4.00e-01 | 100.0% | 76.3% |
| 2gtaA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.53 | 47.0 | 4.17e-01 | 100.0% | 73.2% |
| 3ecsC01 | 1.20.120.1070 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Translation initiation factor eIF-2B, N-terminal domain | 0.50 | 42.0 | 3.76e-01 | 95.6% | 67.0% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3564399 | 3755.3.1.282 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Tmemb_cc2 | 0.78 | 56.0 | 4.65e-01 | 75.0% | 47.0% |
| 4003222 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.76 | 54.0 | 4.74e-01 | 75.0% | 68.0% |
| 4983118 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.76 | 54.0 | 4.80e-01 | 75.0% | 93.7% |
| 3598650 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.76 | 54.0 | 4.80e-01 | 75.0% | 75.8% |
| 3235792 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.70 | 60.0 | 3.90e-01 | 100.0% | 91.4% |
| 4975050 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.70 | 53.0 | 5.20e-01 | 82.4% | 82.7% |
| 4999686 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.69 | 47.0 | 4.58e-01 | 72.1% | 64.0% |
| 4930292 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.69 | 49.0 | 4.89e-01 | 75.0% | 88.6% |
| 4672676 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.69 | 54.0 | 4.23e-01 | 83.8% | 62.9% |
| 3108769 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.68 | 54.0 | 5.33e-01 | 95.6% | 80.3% |
| 3995816 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.68 | 47.0 | 4.37e-01 | 73.5% | 57.6% |
| 5005724 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.68 | 46.0 | 3.23e-01 | 72.1% | 99.6% |
| 3267491 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.67 | 57.0 | 5.70e-01 | 95.6% | 88.6% |
| 3240575 | 4266.2.1.0 ↗ | alpha bundles › Hyaluronidase domain-like › TTHA0068-like › TTHA0068-like | 0.67 | 60.0 | 4.92e-01 | 100.0% | 87.2% |
| 3627942 | 3755.4.1.1 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › PI3K_P85_iSH2 | 0.67 | 47.0 | 3.55e-01 | 75.0% | 30.9% |
| 3258587 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.67 | 58.0 | 4.25e-01 | 95.6% | 68.9% |
| 3186889 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.67 | 58.0 | 5.10e-01 | 97.1% | 66.3% |
| 3996264 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.67 | 46.0 | 3.51e-01 | 73.5% | 29.4% |
| 3708191 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.66 | 56.0 | 5.45e-01 | 97.1% | 82.7% |
| 3592632 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.66 | 46.0 | 4.17e-01 | 89.7% | 52.6% |
| 4028441 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.66 | 57.0 | 5.38e-01 | 97.1% | 78.8% |
| 3480265 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.66 | 56.0 | 5.34e-01 | 97.1% | 78.8% |
| 3743018 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.66 | 54.0 | 5.59e-01 | 94.1% | 93.8% |
| 3225484 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.65 | 55.0 | 5.53e-01 | 97.1% | 90.0% |
| 3272556 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.65 | 54.0 | 3.91e-01 | 97.1% | 32.3% |
| 4978312 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.65 | 55.0 | 5.50e-01 | 97.1% | 90.0% |
| 60156 | 109.10.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Translin › Translin | 0.64 | 56.0 | 3.94e-01 | 97.1% | 35.5% |
| 4947260 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.64 | 54.0 | 5.18e-01 | 97.1% | 78.8% |
| 3739427 | 109.4.1.37 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BRO1 | 0.64 | 57.0 | 3.56e-01 | 97.1% | 20.0% |
| 4977808 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.63 | 52.0 | 5.24e-01 | 97.1% | 90.0% |
| 1697186 | 532.2.1.1 ↗ | alpha arrays › Type III secretion system domain-like › Type III secretion system domains › Type III secretion system domains › HrpJ | 0.63 | 45.0 | 3.45e-01 | 94.1% | 31.0% |
| 3483761 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.62 | 53.0 | 4.04e-01 | 98.5% | 66.1% |
| 3792916 | 639.2.1.0 ↗ | alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) | 0.62 | 52.0 | 5.06e-01 | 100.0% | 86.7% |
| 3670337 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.61 | 48.0 | 4.43e-01 | 88.2% | 100.0% |
| 3507780 | 604.12.1.8 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › KATNA1_MIT | 0.61 | 50.0 | 4.70e-01 | 97.1% | 74.1% |
| 4954658 | 632.19.1.7 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › PF27212 | 0.61 | 41.0 | 4.23e-01 | 72.1% | 76.9% |
| 4972182 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.60 | 48.0 | 4.83e-01 | 94.1% | 88.6% |
| 3931593 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.60 | 50.0 | 4.78e-01 | 95.6% | 80.0% |
| 4159500 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.60 | 48.0 | 4.58e-01 | 97.1% | 74.1% |
| 3270441 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.59 | 47.0 | 4.63e-01 | 97.1% | 82.7% |
| 3497029 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.59 | 49.0 | 4.38e-01 | 95.6% | 66.0% |
| 3923922 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.59 | 48.0 | 4.75e-01 | 97.1% | 86.7% |
| 3770100 | 604.12.1.8 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › KATNA1_MIT | 0.58 | 48.0 | 4.49e-01 | 97.1% | 74.4% |
| 4074824 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.58 | 48.0 | 4.23e-01 | 97.1% | 63.0% |
| 3883622 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.57 | 45.0 | 4.45e-01 | 97.1% | 84.0% |
| 4933335 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.57 | 46.0 | 4.43e-01 | 97.1% | 78.8% |
| 3932069 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.57 | 46.0 | 4.52e-01 | 95.6% | 85.3% |
| 3540972 | 174.1.1.34 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › FAM70 | 0.57 | 48.0 | 3.85e-01 | 100.0% | 81.3% |
| 3402110 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.57 | 45.0 | 4.17e-01 | 97.1% | 66.3% |
| 3268622 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.56 | 45.0 | 3.99e-01 | 92.6% | 61.0% |
| 3629501 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.56 | 45.0 | 2.84e-01 | 97.1% | 15.3% |
| 4943123 | 604.12.1.134 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › AAA | 0.54 | 43.0 | 4.07e-01 | 92.6% | 75.3% |
| 3879426 | 604.12.1.1 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT | 0.54 | 44.0 | 4.22e-01 | 97.1% | 79.5% |
| 3621567 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.54 | 44.0 | 3.51e-01 | 97.1% | 43.9% |