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MW879341.1__QXO11112.1__pEaSNUABM54_00286__00286
Bact-VirMW879341.1__QXO11112.1__pEaSNUABM54_00286__00286
Identity
- Accession:
- MW879341 ↗
- Kingdom:
- phage
Quality
74.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-186
Domain cluster:
rep: OP991903.1__WBF04831.1__X__00157__D16-183
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k4vA00 | 3.30.160.370 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 | 0.61 | 38.0 | 4.41e-01 | 97.6% | 84.0% |
| 6j5cA02 | 3.30.67.10 | Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 | 0.60 | 26.0 | 3.59e-01 | 78.7% | 80.7% |
| 2z4hA01 | 2.40.128.300 | Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain | 0.59 | 29.0 | 3.91e-01 | 96.4% | 94.9% |
| 2kr0A01 | 2.30.29.70 | Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 | 0.58 | 38.0 | 4.56e-01 | 100.0% | 99.1% |
| 4htgA03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.57 | 27.0 | 3.90e-01 | 72.8% | 96.2% |
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.57 | 39.0 | 4.54e-01 | 99.4% | 99.2% |
| 3ebwA01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 38.0 | 4.14e-01 | 89.3% | 84.5% |
| 1k5dB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 38.0 | 4.11e-01 | 100.0% | 82.9% |
| 1wi1A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 34.0 | 4.03e-01 | 99.4% | 93.7% |
| 4ggtB00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.51 | 32.0 | 3.87e-01 | 93.5% | 98.1% |
| 1qwdB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 36.0 | 3.66e-01 | 89.9% | 74.7% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5035338 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.64 | 30.0 | 3.05e-01 | 78.1% | 43.5% |
| 4974435 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.61 | 31.0 | 3.95e-01 | 99.4% | 83.2% |
| 2803991 | 3209.1.1.1 ↗ | a+b two layers › RPL28 › RPL28 › RPL28 › Ribosomal_L28e | 0.61 | 35.0 | 3.72e-01 | 100.0% | 62.4% |
| 3523446 | 220.1.1.2 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 | 0.60 | 36.0 | 4.46e-01 | 98.2% | 99.0% |
| 4030715 | 220.1.1.4 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 | 0.57 | 38.0 | 4.26e-01 | 99.4% | 87.7% |
| 3923150 | 220.1.1.4 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 | 0.56 | 39.0 | 4.44e-01 | 100.0% | 95.2% |
| 4488000 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 35.0 | 4.14e-01 | 99.4% | 92.2% |
| 3493320 | 220.1.1.2 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 | 0.55 | 35.0 | 3.87e-01 | 99.4% | 79.3% |
| 3647116 | 220.1.1.78 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 | 0.55 | 37.0 | 4.19e-01 | 100.0% | 91.2% |
| 3219683 | 220.1.1.2 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 | 0.55 | 36.0 | 3.92e-01 | 99.4% | 79.3% |
| 3230371 | 3180.1.1.0 ↗ | a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related | 0.53 | 28.0 | 3.39e-01 | 98.8% | 77.3% |
| 3945059 | 9.1.1.6 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › NlpE | 0.52 | 31.0 | 3.80e-01 | 97.6% | 93.3% |
D2
high
residues 196-361
Domain cluster:
rep: OP991903.1__WBF04831.1__X__00157__D16-183
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.66 | 51.0 | 5.29e-01 | 100.0% | 85.7% |
| 1ah5A03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.61 | 26.0 | 3.49e-01 | 72.3% | 74.4% |
| 1wi1A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 33.0 | 3.93e-01 | 97.6% | 88.3% |
| 1bf5A04 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.54 | 31.0 | 3.68e-01 | 86.1% | 81.4% |
| 3a7rA02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.54 | 28.0 | 3.64e-01 | 89.8% | 91.0% |
| 3pcrA01 | 3.10.450.460 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain | 0.53 | 29.0 | 3.63e-01 | 83.7% | 91.5% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.51 | 35.0 | 3.92e-01 | 92.2% | 93.3% |
| 3lhnA00 | 2.40.128.640 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 29.0 | 3.46e-01 | 76.5% | 85.0% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3572874 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.68 | 33.0 | 4.45e-01 | 99.4% | 88.2% |
| 3900401 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.63 | 31.0 | 3.56e-01 | 98.8% | 61.6% |
| 4935472 | 330.4.1.0 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain | 0.63 | 26.0 | 3.85e-01 | 71.1% | 88.6% |
| 3579807 | 101.1.2.709 ↗ | alpha arrays › HTH › HTH › winged helix domain › Hexokinase_1 | 0.60 | 20.0 | 2.58e-01 | 95.8% | 47.0% |
| 3608102 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.59 | 25.0 | 3.68e-01 | 71.7% | 90.0% |
| 3929989 | 330.16.1.2 ↗ | a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain › KAP | 0.57 | 31.0 | 4.02e-01 | 98.2% | 100.0% |
| 3641734 | 3887.2.1.1 ↗ | a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung | 0.56 | 33.0 | 3.75e-01 | 89.2% | 75.8% |
| 3820988 | 220.1.1.11 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru | 0.55 | 36.0 | 3.92e-01 | 100.0% | 79.3% |
| 3482374 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 36.0 | 3.07e-01 | 100.0% | 40.4% |
| 3548416 | 220.1.1.158 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_LRR1 | 0.53 | 36.0 | 4.09e-01 | 99.4% | 94.2% |
| 4444916 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 34.0 | 2.58e-01 | 97.0% | 26.3% |
| 3832419 | 319.1.1.13 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF26144 | 0.52 | 25.0 | 3.14e-01 | 94.0% | 72.0% |
| 3787121 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.52 | 31.0 | 3.45e-01 | 87.3% | 75.2% |
| 3995339 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.52 | 33.0 | 3.49e-01 | 86.1% | 70.7% |