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MW879342.1__QXO11155.1__pEaSNUABM19_00009__00009

Bact-Vir

MW879342.1__QXO11155.1__pEaSNUABM19_00009__00009

Identity

Accession:
MW879342 ↗
Kingdom:
phage

Quality

92.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-57
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3layF00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.82 59.0 5.22e-01 98.2% 55.1%
2ficB00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.77 55.0 3.68e-01 98.2% 21.4%
2gscC00 1.20.1440.60 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence 0.77 67.0 5.41e-01 98.2% 98.2%
7nc3F01 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.76 56.0 4.35e-01 96.5% 38.6%
1hqoA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.74 54.0 4.02e-01 98.2% 33.6%
1urfA00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.73 56.0 4.91e-01 98.2% 56.8%
2yevA02 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.73 52.0 4.77e-01 98.2% 58.1%
5jrcA00 1.20.58.2140 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.73 61.0 4.15e-01 89.5% 76.3%
3behB01 1.20.120.540 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels 0.71 50.0 3.91e-01 100.0% 35.9%
3craA02 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.71 57.0 4.28e-01 100.0% 38.3%
2efkA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.70 50.0 3.21e-01 98.2% 16.4%
2oznB01 1.20.1270.90 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like 0.68 45.0 4.11e-01 91.2% 48.8%
1b5lA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.68 57.0 4.30e-01 100.0% 61.2%
3g67A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.68 51.0 3.39e-01 98.2% 21.6%
1blwC00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.67 60.0 4.46e-01 100.0% 68.8%
3cegA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.65 56.0 3.55e-01 96.5% 65.4%
5ulcX00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.64 55.0 4.39e-01 100.0% 73.8%
3f2bA05 6.10.50.10 Special › Helix non-globular › Insulin-like, subunit E › 0.64 39.0 4.19e-01 94.7% 72.9%
2oxlA00 1.20.5.5260 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.64 53.0 5.21e-01 89.5% 90.3%
5nl9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 44.0 3.89e-01 73.7% 100.0%
2qyuA02 1.25.40.300 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Putative secreted effector protein 0.63 48.0 3.38e-01 84.2% 44.1%
2guzB00 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.63 55.0 5.32e-01 98.2% 92.3%
5n13A00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.63 53.0 4.38e-01 98.2% 89.8%
3gnlB02 1.10.287.1890 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.60 54.0 5.06e-01 98.2% 88.2%
3e3vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 41.0 4.24e-01 71.9% 98.1%
4ip8A00 1.10.132.110 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Serum amyloid A protein 0.60 45.0 3.71e-01 82.5% 52.4%
2hoqA02 1.10.150.520 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.60 52.0 4.66e-01 98.2% 92.4%
3axsA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 53.0 3.28e-01 100.0% 41.9%
2xppA00 1.20.930.10 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.59 50.0 3.81e-01 96.5% 60.6%
5g5gB02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.58 48.0 4.25e-01 100.0% 97.9%
4uobA02 1.10.340.30 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 0.57 48.0 3.78e-01 96.5% 58.7%
2guzA00 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.57 50.0 4.73e-01 100.0% 83.1%
7ep1B01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.57 47.0 3.20e-01 96.5% 34.7%
4abmD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.57 51.0 4.59e-01 100.0% 79.2%
3b0bB00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.56 38.0 3.20e-01 91.2% 41.2%
3d36B02 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.56 45.0 4.44e-01 100.0% 85.2%
2va8A03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.55 45.0 3.00e-01 89.5% 38.3%
4rg8A04 1.10.287.1240 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.55 44.0 4.30e-01 98.2% 83.9%
1h3mB00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.55 46.0 3.19e-01 100.0% 52.8%
2ymmA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.54 38.0 3.64e-01 78.9% 100.0%
1vw4L02 1.10.246.170 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.53 42.0 3.73e-01 87.7% 72.9%
3i2fA02 1.10.3020.10 Mainly Alpha › Orthogonal Bundle › alpha-amino acid ester hydrolase ( Helical cap domain) › alpha-amino acid ester hydrolase ( Helical cap domain) 0.53 36.0 3.18e-01 98.2% 44.2%
2zcuA02 3.90.25.10 Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 0.52 41.0 3.41e-01 94.7% 84.3%
4ielA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.52 43.0 3.56e-01 100.0% 53.4%
4etsA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 42.0 3.72e-01 96.5% 81.6%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3482349 604.12.1.2 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Vta1 0.86 58.0 5.53e-01 70.2% 100.0%
3944325 3711.1.1.20 alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › DUF444 0.83 60.0 5.22e-01 98.2% 53.8%
4648077 2006.1.6.38 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF444 0.83 60.0 3.69e-01 98.2% 15.6%
4378877 3711.1.1.20 alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › DUF444 0.80 62.0 5.56e-01 100.0% 61.3%
3558280 603.1.1.114 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › HR1 0.79 61.0 5.00e-01 98.2% 48.4%
3790121 603.1.1.114 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › HR1 0.79 61.0 4.91e-01 98.2% 46.0%
3239510 192.5.1.0 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat 0.79 61.0 4.98e-01 98.2% 48.4%
4608200 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.78 61.0 4.52e-01 98.2% 36.8%
4945538 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.78 60.0 5.51e-01 100.0% 65.7%
3940706 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.77 54.0 3.23e-01 73.7% 19.5%
4096596 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.77 59.0 3.41e-01 100.0% 10.0%
3205582 605.8.1.2 alpha duplicates or obligate multimers › ROP-like › BAS1536-like › BAS1536-like › PF27894 0.77 62.0 5.88e-01 100.0% 73.8%
3762595 604.7.1.13 alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › HR1 0.77 60.0 5.06e-01 100.0% 52.2%
3909017 192.5.1.1 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 0.77 59.0 4.93e-01 98.2% 51.1%
3408508 3712.1.1.1 a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Med11 0.77 59.0 5.16e-01 98.2% 57.5%
3942662 150.5.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.77 59.0 4.85e-01 98.2% 48.4%
4317199 603.5.1.1 alpha bundles › STAT-like › FlgN-like › FlgN-like › FlgN 0.76 59.0 4.39e-01 98.2% 36.8%
3170491 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.75 58.0 3.72e-01 98.2% 20.9%
4000262 192.5.1.1 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 0.75 61.0 5.13e-01 100.0% 54.4%
3720652 4177.1.1.5 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Vps5 0.74 56.0 3.58e-01 100.0% 18.0%
3255232 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.74 53.0 3.39e-01 98.2% 17.2%
3271303 4177.1.1.1 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.74 53.0 3.36e-01 98.2% 16.2%
3189247 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.73 56.0 3.59e-01 98.2% 19.7%
4132296 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.73 56.0 5.50e-01 98.2% 76.7%
4453815 192.12.1.1 alpha bundles › Long alpha-hairpin › Transcriptional repressor TraM › Transcriptional repressor TraM › Prok-TraM 0.73 56.0 4.62e-01 98.2% 48.4%
3477880 4177.1.1.1 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.73 55.0 3.44e-01 100.0% 15.9%
4158818 109.4.1.1677 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_Syf1_M, HAT_Syf1_CNRKL1_N 0.73 53.0 3.13e-01 77.2% 14.0%
3235839 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.72 55.0 3.79e-01 98.2% 26.3%
3607086 4992.1.1.0 extended segments › RelB-like › RelB-like › RelB-like 0.72 59.0 5.14e-01 98.2% 61.3%
3608012 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.72 59.0 5.02e-01 98.2% 57.6%
3619061 5054.1.1.8 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.72 62.0 4.04e-01 100.0% 26.9%
3576467 4177.1.1.1 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.71 51.0 3.15e-01 98.2% 14.1%
3600361 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.70 56.0 4.65e-01 98.2% 51.6%
4938271 605.6.1.0 alpha duplicates or obligate multimers › ROP-like › HP1531-like › HP1531-like 0.68 57.0 5.01e-01 100.0% 62.2%
5079569 605.6.1.0 alpha duplicates or obligate multimers › ROP-like › HP1531-like › HP1531-like 0.67 57.0 5.10e-01 100.0% 72.9%
5021829 605.6.1.0 alpha duplicates or obligate multimers › ROP-like › HP1531-like › HP1531-like 0.66 54.0 4.80e-01 100.0% 62.2%
4638447 129.1.1.9 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_Gly3P_dh_C 0.66 44.0 3.26e-01 100.0% 26.7%
3825757 101.35.1.23 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Ovate 0.65 46.0 4.44e-01 98.2% 66.2%
3594129 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.65 51.0 3.43e-01 100.0% 22.8%
3631825 109.4.1.1407 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › STAG, SCD, HEAT_SCC3-SA 0.65 61.0 3.26e-01 100.0% 8.4%
3997708 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 51.0 3.91e-01 91.2% 86.7%
3168021 604.12.1.2 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Vta1 0.63 43.0 3.96e-01 73.7% 76.2%
3197548 3755.2.1.0 alpha bundles › YscO-like › Flagellar FliJ protein › Flagellar FliJ protein 0.62 56.0 3.99e-01 98.2% 36.7%
4937823 3558.1.1.0 alpha arrays › HSDR subunit helical domain › HSDR subunit helical domain › HSDR subunit helical domain 0.62 55.0 4.56e-01 100.0% 72.0%
5001714 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.62 50.0 3.07e-01 93.0% 22.4%
3264568 3748.1.1.3 extended segments › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain › eIF3h_C 0.61 56.0 4.48e-01 98.2% 80.0%
3788865 101.1.2.374 alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD 0.61 43.0 3.85e-01 73.7% 76.2%
1883323 3455.1.1.4 alpha arrays › WY-domain in RXLR effectors › WY-domain in RXLR effectors › WY-domain in RXLR effectors › ATR1_WY-dom 0.60 49.0 4.27e-01 93.0% 60.2%
3224625 101.1.2.374 alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD 0.59 44.0 4.01e-01 80.7% 82.7%
3825200 181.1.1.0 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins 0.58 42.0 3.59e-01 98.2% 46.3%
1247969 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.58 39.0 3.63e-01 98.2% 56.3%
3304020 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 49.0 3.41e-01 94.7% 96.8%
3707613 3877.1.1.0 alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC 0.57 50.0 3.29e-01 100.0% 79.6%
5044288 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 44.0 3.94e-01 84.2% 77.5%
4147304 103.5.1.2 alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › DmpG_comm 0.56 40.0 4.00e-01 75.4% 88.3%
4319059 103.5.1.2 alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › DmpG_comm 0.56 40.0 3.92e-01 75.4% 84.1%
3456370 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.56 50.0 3.63e-01 100.0% 36.8%
5053823 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.55 44.0 2.81e-01 98.2% 28.9%
3728309 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 40.0 3.76e-01 77.2% 97.1%
3663639 101.1.1.30 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.54 48.0 3.45e-01 100.0% 34.9%
4985898 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 44.0 3.84e-01 93.0% 60.0%
3706397 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 42.0 4.08e-01 86.0% 80.0%
5018556 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.52 46.0 3.65e-01 100.0% 48.7%