Back to structures

MW960030.1__QWY82955.1__X__00001

Bact-Vir

MW960030.1__QWY82955.1__X__00001

Identity

Accession:
MW960030 ↗
Kingdom:
phage

Quality

91.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-64
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d6wB02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.62 36.0 4.25e-01 96.7% 89.7%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 37.0 3.62e-01 95.0% 57.6%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 40.0 3.43e-01 70.0% 55.2%
1f02T00 4.10.820.10 Few Secondary Structures › Irregular › Translocated Intimin Receptor; Chain T › Translocated intimin receptor, central domain 0.59 32.0 3.15e-01 70.0% 48.5%
1eqtA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 37.0 3.62e-01 96.7% 58.2%
4yzrA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.57 45.0 2.80e-01 90.0% 65.2%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 38.0 3.19e-01 70.0% 47.6%
2wdoA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.57 38.0 3.07e-01 70.0% 66.7%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 38.0 3.17e-01 70.0% 43.8%
3c6fA01 3.30.240.20 Alpha Beta › 2-Layer Sandwich › CRO Repressor › bsu07140 like domains 0.55 32.0 3.26e-01 98.3% 54.8%
1v57A03 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.53 40.0 3.23e-01 90.0% 85.4%
1j7xA02 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.53 42.0 2.96e-01 91.7% 96.3%
4dovA00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.53 45.0 3.36e-01 96.7% 70.7%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 34.0 3.38e-01 96.7% 62.1%
5xuhA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.52 37.0 3.01e-01 75.0% 70.4%
1yx1A00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.52 37.0 2.63e-01 83.3% 81.6%
4pz7A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 43.0 3.44e-01 100.0% 81.8%
2mh9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 35.0 2.88e-01 73.3% 52.0%
1xw3A01 3.90.1530.10 Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain 0.51 36.0 3.05e-01 73.3% 70.8%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 34.0 2.91e-01 70.0% 51.5%
3uoxB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 42.0 2.78e-01 100.0% 77.3%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4043462 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.69 43.0 3.40e-01 100.0% 31.7%
3668417 4106.1.1.1 few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.59 46.0 3.62e-01 83.3% 51.7%
3261801 267.1.1.3 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase 0.57 48.0 3.22e-01 98.3% 64.7%
5050094 2004.1.1.97 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MobB 0.56 38.0 2.83e-01 71.7% 55.3%
3197950 256.1.1.0 a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like 0.54 37.0 4.02e-01 90.0% 97.8%
3934420 5001.1.1.44 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv 0.54 37.0 2.60e-01 73.3% 53.8%
4114423 304.20.1.5 a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › tRNA_synt_2f 0.53 39.0 2.60e-01 75.0% 70.2%
3988603 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.53 38.0 3.40e-01 73.3% 60.0%
3919567 101.1.2.178 alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.53 36.0 3.10e-01 70.0% 61.1%
3724974 101.1.2.519 alpha arrays › HTH › HTH › winged helix domain › DUF7791 0.52 35.0 2.55e-01 70.0% 66.7%
3236338 101.1.21.0 alpha arrays › HTH › HTH › HTH in T7 RNA polymerase 0.51 41.0 2.82e-01 98.3% 79.2%
3439131 101.1.2.407 alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 0.51 38.0 3.27e-01 85.0% 50.5%
3834208 2004.5.1.3 a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › DENN 0.51 40.0 2.80e-01 93.3% 83.7%
3803377 7.1.1.7 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_3 0.51 40.0 3.27e-01 100.0% 43.1%
3783976 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.51 37.0 3.29e-01 80.0% 55.6%
3448756 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.51 34.0 3.01e-01 70.0% 92.2%
3394689 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 35.0 2.93e-01 73.3% 98.1%
3422531 7.1.1.7 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_3 0.50 39.0 3.77e-01 100.0% 74.7%