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MW960031.1__QWY83196.1__X__00078

Bact-Vir

MW960031.1__QWY83196.1__X__00078

Identity

Accession:
MW960031 ↗
Kingdom:
phage

Quality

88.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 213-312
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF08707.17 best PriCT_2 36.2 8.70e-09 77.0% 94.8%
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2af7D00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.63 46.0 4.37e-01 77.0% 89.3%
3k9iA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 37.0 3.72e-01 72.0% 59.2%
2chpA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.58 42.0 3.74e-01 76.0% 92.6%
1hssA00 1.10.110.10 Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins 0.58 41.0 3.97e-01 73.0% 91.0%
2xppA00 1.20.930.10 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.56 39.0 3.60e-01 74.0% 59.1%
4w9rA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 37.0 3.81e-01 72.0% 72.3%
2clbA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.54 39.0 3.41e-01 76.0% 84.9%
6orkA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 36.0 2.76e-01 72.0% 28.6%
2qqyA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.52 38.0 3.46e-01 76.0% 93.5%
3axsA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 43.0 3.04e-01 91.0% 89.4%
5hayA02 1.25.40.440 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Nucleoporin, helical domain, central subdomain 0.52 34.0 3.74e-01 73.0% 86.1%
4ui9P01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 37.0 2.71e-01 76.0% 42.1%
3qc1A01 1.25.40.540 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TAP42-like family 0.51 37.0 3.27e-01 77.0% 78.1%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3788824 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.67 50.0 3.78e-01 79.0% 80.4%
4942022 182.1.3.3 alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › DNA_primase_lrg 0.67 60.0 5.63e-01 98.0% 87.5%
4344734 109.4.1.1457 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF27772 0.67 47.0 3.26e-01 74.0% 25.6%
4079912 608.1.1.1 alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD 0.65 48.0 4.52e-01 77.0% 92.5%
5075461 608.1.1.1 alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD 0.65 47.0 4.49e-01 77.0% 91.7%
4940232 608.1.1.1 alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD 0.64 46.0 4.33e-01 77.0% 87.2%
3318109 601.1.2.78 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › SEO_N 0.62 43.0 3.34e-01 73.0% 87.8%
3310608 109.7.1.0 alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E 0.58 36.0 3.90e-01 74.0% 74.1%
3583862 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 41.0 3.77e-01 77.0% 64.4%
3263853 603.1.1.98 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE, Syntaxin_2 0.55 39.0 3.27e-01 76.0% 81.5%
4985660 2498.1.1.0 mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.54 44.0 3.47e-01 87.0% 70.9%
307814 150.1.1.1 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin 0.53 37.0 3.28e-01 73.0% 80.9%
4567392 2003.1.1.58 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_4 0.53 45.0 3.09e-01 94.0% 46.6%
D2 high residues 345-440
PDB
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3nnqA00 1.10.340.70 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › 0.57 36.0 3.68e-01 96.9% 64.2%
1hssA00 1.10.110.10 Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins 0.52 35.0 3.40e-01 74.0% 60.4%
3qfwB02 3.20.20.110 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain 0.50 40.0 3.07e-01 89.6% 96.0%
D3 high residues 676-769
PDB
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3lapA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 48.0 5.50e-01 96.8% 88.2%
1p6rA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 47.0 5.01e-01 87.2% 80.5%
3bz6A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 48.0 5.23e-01 85.1% 88.5%
2od5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 51.0 5.24e-01 89.4% 85.7%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 46.0 4.65e-01 87.2% 76.1%
5hvqC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 46.0 4.63e-01 88.3% 73.5%
1fbqA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 50.0 5.15e-01 87.2% 100.0%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 41.0 4.33e-01 85.1% 77.4%
5hvqC01 3.90.1150.220 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.61 48.0 5.06e-01 88.3% 98.8%
2l01A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 4.78e-01 92.6% 93.5%
2fiaB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.60 41.0 3.45e-01 85.1% 41.5%
3g2mA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 41.0 3.40e-01 85.1% 40.0%
2vi7A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.60 42.0 3.48e-01 85.1% 42.3%
2ns0A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 47.0 4.91e-01 86.2% 94.0%
3e1sA01 1.10.10.2220 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.58 45.0 4.56e-01 85.1% 100.0%
2qbyB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 43.0 4.35e-01 84.0% 80.2%
3cggA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 42.0 3.35e-01 84.0% 38.7%
2pbiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 46.0 4.47e-01 87.2% 86.5%
2ob0C01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 42.0 3.51e-01 88.3% 44.4%
6n9gA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 45.0 4.48e-01 87.2% 91.0%
2l2oA00 1.10.10.1540 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain 0.56 43.0 4.51e-01 87.2% 91.8%
2fckA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.56 46.0 3.68e-01 87.2% 94.8%
1bm9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 44.0 4.13e-01 88.3% 71.7%
5hh1A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 42.0 3.34e-01 89.4% 40.0%
1wdcC01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.53 35.0 3.75e-01 86.2% 80.8%
2b25A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 36.0 2.90e-01 81.9% 35.7%
3d3sA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 38.0 3.24e-01 84.0% 44.7%
3igrA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 42.0 3.40e-01 88.3% 94.5%
2bl0B01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.52 32.0 3.58e-01 81.9% 83.8%
3r96B00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 42.0 3.44e-01 88.3% 97.7%
3shpA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 41.0 3.49e-01 89.4% 96.4%
3sm3A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 39.0 3.07e-01 84.0% 50.9%
3e8sA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 39.0 3.05e-01 84.0% 99.1%
1nslA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 41.0 3.34e-01 87.2% 93.8%
1a9xA04 1.10.1030.10 Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain 0.51 35.0 3.01e-01 92.6% 44.7%
2jlmA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.50 41.0 3.34e-01 88.3% 92.7%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3677397 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.76 53.0 3.24e-01 86.2% 13.3%
3465917 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.76 52.0 3.25e-01 86.2% 14.0%
3667030 101.1.2.466 alpha arrays › HTH › HTH › winged helix domain › WHD_MCM3_C 0.76 52.0 5.71e-01 86.2% 85.9%
3772634 101.1.2.397 alpha arrays › HTH › HTH › winged helix domain › WHD_MCM8 0.73 49.0 5.32e-01 86.2% 81.2%
3167236 148.1.3.31 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM4_WHD 0.71 51.0 5.37e-01 86.2% 83.5%
3744259 101.1.2.154 alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.71 53.0 4.73e-01 86.2% 56.9%
5062643 101.1.2.138 alpha arrays › HTH › HTH › winged helix domain › DUF3860 0.70 53.0 5.70e-01 84.0% 93.8%
5036586 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 50.0 5.27e-01 87.2% 84.7%
3972430 101.1.2.213 alpha arrays › HTH › HTH › winged helix domain › NrtR_WHD 0.68 46.0 5.04e-01 78.7% 86.7%
3255111 101.1.2.397 alpha arrays › HTH › HTH › winged helix domain › WHD_MCM8 0.67 45.0 5.15e-01 85.1% 100.0%
3269532 101.1.2.151 alpha arrays › HTH › HTH › winged helix domain › COR 0.67 52.0 5.50e-01 87.2% 92.9%
5012833 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 46.0 5.17e-01 87.2% 97.1%
4012917 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 51.0 5.12e-01 86.2% 80.0%
3552400 101.1.2.566 alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C 0.66 53.0 3.75e-01 87.2% 30.7%
3841412 101.1.2.154 alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.65 47.0 4.45e-01 85.1% 62.6%
3343334 101.1.2.98 alpha arrays › HTH › HTH › winged helix domain › CDT1 0.65 52.0 4.51e-01 87.2% 57.9%
3392391 101.1.2.397 alpha arrays › HTH › HTH › winged helix domain › WHD_MCM8 0.64 45.0 4.92e-01 86.2% 92.0%
5078617 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 46.0 4.59e-01 85.1% 73.7%
3953987 101.1.2.213 alpha arrays › HTH › HTH › winged helix domain › NrtR_WHD 0.64 42.0 4.49e-01 75.5% 78.8%
3469845 101.1.2.98 alpha arrays › HTH › HTH › winged helix domain › CDT1 0.64 51.0 4.15e-01 87.2% 51.1%
3670739 101.1.2.98 alpha arrays › HTH › HTH › winged helix domain › CDT1 0.63 50.0 4.24e-01 86.2% 50.6%
4990676 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.63 51.0 4.86e-01 87.2% 77.3%
5050129 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.63 51.0 4.87e-01 87.2% 77.3%
4934296 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 48.0 4.66e-01 84.0% 72.4%
3225058 101.1.2.566 alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C 0.63 51.0 3.49e-01 87.2% 28.3%
4334068 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 51.0 5.18e-01 87.2% 95.6%
3727445 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 47.0 4.58e-01 86.2% 71.4%
3305861 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 45.0 4.05e-01 88.3% 54.1%
3334401 101.1.2.566 alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C 0.62 54.0 3.94e-01 97.9% 90.0%
5012343 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.61 47.0 4.81e-01 86.2% 84.4%
4961270 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.61 49.0 4.75e-01 86.2% 79.0%
3908545 101.1.2.4 alpha arrays › HTH › HTH › winged helix domain › Forkhead 0.61 45.0 4.28e-01 85.1% 64.3%
4997952 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 46.0 4.76e-01 84.0% 88.2%
4606139 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 47.0 4.99e-01 87.2% 96.2%
3962193 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 42.0 4.72e-01 85.1% 97.1%
3720812 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 49.0 4.65e-01 88.3% 73.6%
4948099 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 49.0 4.66e-01 87.2% 81.8%
4310506 101.1.2.312 alpha arrays › HTH › HTH › winged helix domain › MSC 0.60 48.0 3.68e-01 87.2% 38.7%
5002609 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 47.0 4.73e-01 84.0% 83.2%
3200378 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 45.0 4.44e-01 86.2% 75.0%
3813507 101.1.2.278 alpha arrays › HTH › HTH › winged helix domain › CNDH2_C 0.59 46.0 4.14e-01 86.2% 60.0%
5058376 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 48.0 4.81e-01 87.2% 88.4%
5080146 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.59 45.0 4.45e-01 86.2% 77.0%
3744355 101.1.2.148 alpha arrays › HTH › HTH › winged helix domain › ORC5_C 0.58 46.0 4.26e-01 87.2% 80.0%
5009799 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.58 42.0 4.44e-01 87.2% 85.9%
3735293 101.1.2.312 alpha arrays › HTH › HTH › winged helix domain › MSC 0.58 45.0 3.38e-01 86.2% 34.2%
5014345 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.58 45.0 4.59e-01 86.2% 86.7%
5057571 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.58 42.0 4.34e-01 87.2% 82.2%
3597631 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 46.0 3.51e-01 90.4% 75.1%
4940742 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.57 42.0 4.41e-01 86.2% 87.1%
5059468 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.57 42.0 4.34e-01 86.2% 85.9%
3692895 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.56 48.0 3.71e-01 98.9% 83.5%
3483772 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 43.0 3.97e-01 87.2% 72.0%
3305434 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.53 36.0 3.70e-01 72.3% 73.3%
3635228 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 46.0 3.42e-01 100.0% 62.4%
4301054 213.1.1.32 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › GNAT_acetyltr_2 0.52 44.0 3.39e-01 96.8% 86.1%
4125501 213.1.1.32 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › GNAT_acetyltr_2 0.52 44.0 3.37e-01 96.8% 84.3%
5078043 213.1.1.32 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › GNAT_acetyltr_2 0.51 43.0 3.20e-01 96.8% 74.8%
4300980 213.1.1.32 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › GNAT_acetyltr_2 0.51 43.0 3.29e-01 95.7% 85.1%
4968526 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.51 43.0 4.37e-01 93.6% 98.9%
3613364 108.1.1.27 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6 0.51 38.0 3.68e-01 78.7% 83.8%
5066201 101.1.2.554 alpha arrays › HTH › HTH › winged helix domain › PF30184 0.50 44.0 4.37e-01 98.9% 96.0%
D4 medium residues 1-84
PDB
CATH (39)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3h20A01 3.30.1490.240 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain 0.81 61.0 6.75e-01 98.8% 100.0%
3orqA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.64 42.0 4.69e-01 82.1% 88.9%
1dgsA02 3.30.1490.70 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.64 52.0 5.07e-01 98.8% 80.0%
1n26A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 46.0 4.78e-01 82.1% 83.3%
3ffyA00 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.62 43.0 3.97e-01 100.0% 54.5%
3nd1A02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.61 44.0 4.07e-01 76.2% 71.8%
1cbfA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.61 47.0 4.21e-01 84.5% 76.0%
2npnA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.59 43.0 3.97e-01 77.4% 75.2%
7veeA02 3.40.366.10 Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 0.59 43.0 2.88e-01 77.4% 66.5%
1s4dE02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.57 48.0 4.20e-01 97.6% 60.4%
2qbuA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.56 34.0 3.34e-01 79.8% 52.1%
1va0B02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.56 45.0 4.06e-01 91.7% 81.5%
6heiA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.56 43.0 2.89e-01 83.3% 29.4%
4aw7A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.56 42.0 3.77e-01 81.0% 94.1%
3r8qA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 44.0 4.28e-01 100.0% 78.3%
1zvfB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 41.0 3.32e-01 78.6% 42.7%
3e0jB00 3.90.1030.20 Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 0.55 43.0 3.70e-01 86.9% 53.8%
2ii7H00 2.60.290.11 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like 0.55 43.0 3.98e-01 100.0% 67.0%
1owwA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 44.0 4.30e-01 100.0% 80.6%
7y8sB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 43.0 4.34e-01 100.0% 85.1%
2eddA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 46.0 4.17e-01 100.0% 70.5%
5kfzA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.53 46.0 4.13e-01 98.8% 74.8%
1wfoA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 43.0 4.07e-01 98.8% 73.1%
3hwjA00 2.60.120.820 Mainly Beta › Sandwich › Jelly Rolls › PHR domain 0.53 39.0 3.31e-01 79.8% 67.1%
1ayeA01 3.30.70.340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like 0.53 38.0 3.65e-01 76.2% 80.8%
2ee2A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 42.0 4.16e-01 96.4% 83.9%
1wktA00 2.60.20.20 Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › 0.52 39.0 3.89e-01 81.0% 92.0%
4zpxA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 40.0 2.95e-01 83.3% 61.8%
5d79A03 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.52 46.0 3.58e-01 100.0% 72.2%
2qsdB02 3.50.100.10 Alpha Beta › 3-Layer(bba) Sandwich › protein il1583 fold › protein il1583 domain 0.52 36.0 3.77e-01 72.6% 80.8%
2mraA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.52 37.0 3.33e-01 75.0% 82.9%
2yeqA01 2.60.40.380 Mainly Beta › Sandwich › Immunoglobulin-like › Purple acid phosphatase-like, N-terminal 0.52 39.0 3.61e-01 81.0% 76.1%
1kt0A02 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.51 38.0 3.56e-01 82.1% 92.1%
1fnfA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 42.0 4.06e-01 100.0% 79.8%
3dnhA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 40.0 3.39e-01 86.9% 49.0%
4p04A01 2.60.40.3100 Mainly Beta › Sandwich › Immunoglobulin-like › Arylsulphate sulphotransferase monomer, N-terminal domain 0.51 42.0 3.90e-01 100.0% 71.7%
2arzA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 40.0 3.38e-01 86.9% 51.3%
4akmB00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.50 38.0 3.11e-01 81.0% 90.4%
1j5yA02 3.30.1340.20 Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › 3H domain 0.50 42.0 3.90e-01 98.8% 73.8%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3929359 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.64 43.0 3.97e-01 70.2% 89.0%
3627192 11.1.4.71 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › NOMO1-like_7th 0.63 40.0 4.31e-01 79.8% 77.1%
3594101 301.1.1.0 a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like 0.60 45.0 3.68e-01 79.8% 44.5%
3929391 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.60 41.0 3.83e-01 71.4% 87.3%
3489385 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 45.0 3.96e-01 85.7% 55.2%
3321071 101.1.2.115 alpha arrays › HTH › HTH › winged helix domain › CDC27 0.58 45.0 3.86e-01 85.7% 53.6%
4024947 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 45.0 4.10e-01 85.7% 64.3%
4962686 4176.1.1.2 a/b three-layered sandwiches › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › S-Me-THD_N 0.57 51.0 3.80e-01 100.0% 62.8%
3406669 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 40.0 3.80e-01 73.8% 65.0%
3690210 10.12.1.52 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_8 0.56 43.0 2.91e-01 83.3% 37.3%
4971633 4176.1.1.2 a/b three-layered sandwiches › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › a/b domain in CV3147-like proteins › S-Me-THD_N 0.56 50.0 3.69e-01 100.0% 59.1%
3801890 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.55 43.0 3.31e-01 85.7% 41.5%
3276495 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.55 40.0 2.72e-01 79.8% 49.6%
4385229 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.54 46.0 2.77e-01 100.0% 12.5%
4955607 3435.1.1.0 a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC 0.54 42.0 3.16e-01 94.0% 33.5%
3928432 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.54 39.0 3.76e-01 78.6% 93.0%
3927514 284.1.1.1 a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP_C 0.53 41.0 3.59e-01 83.3% 80.8%
223777 3115.4.1.1 a+b two layers › GP2-like › Uncharacterized conserved protein Il1583 › Uncharacterized conserved protein Il1583 › DUF1543 0.53 36.0 3.80e-01 70.2% 82.7%
3965010 3115.4.1.1 a+b two layers › GP2-like › Uncharacterized conserved protein Il1583 › Uncharacterized conserved protein Il1583 › DUF1543 0.53 39.0 3.89e-01 79.8% 91.1%
5036533 3435.1.1.0 a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC 0.52 43.0 3.18e-01 94.0% 33.8%
4431272 2004.1.1.996 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activat, Mg_chelatase, bpMoxR 0.52 40.0 2.91e-01 83.3% 63.7%
3935422 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 44.0 3.83e-01 98.8% 87.9%
4950008 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.52 39.0 3.47e-01 82.1% 77.6%
4366029 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.51 45.0 4.07e-01 98.8% 71.3%
3171719 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 46.0 3.99e-01 100.0% 80.8%
4930826 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.51 39.0 3.76e-01 81.0% 93.7%
3616254 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 44.0 4.00e-01 100.0% 71.3%
4647057 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 44.0 4.12e-01 98.8% 82.9%
3184815 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 44.0 4.15e-01 100.0% 80.0%
D5 medium residues 85-212
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF16793.11 best RepB_primase 42.1 1.20e-10 89.1% 44.1%
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3h20A02 3.30.70.1790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RepB DNA-primase, N-terminal domain 0.85 66.0 7.33e-01 85.9% 100.0%
2iruA02 3.30.70.3300 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.76 57.0 5.60e-01 78.1% 92.0%
1g71A01 3.90.920.10 Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain 0.74 57.0 4.53e-01 78.9% 48.7%
2y1rK00 3.30.70.1950 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 43.0 4.92e-01 79.7% 92.4%
3jtnB00 3.30.70.1950 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 42.0 4.86e-01 78.9% 93.3%
3otdA00 3.30.70.3000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) 0.62 48.0 3.98e-01 83.6% 92.1%
4kgmA00 3.30.70.3000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) 0.62 48.0 3.97e-01 82.0% 90.0%
2dbbA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.62 40.0 4.55e-01 75.8% 89.2%
4ch7A02 3.30.70.3460 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 52.0 4.66e-01 93.8% 98.9%
6foqA03 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.60 47.0 4.00e-01 82.8% 71.0%
4mlaA03 3.40.462.10 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidases, C-terminal domain 0.60 46.0 3.82e-01 79.7% 74.4%
5axmB00 3.30.70.3000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) 0.60 45.0 3.78e-01 81.2% 94.6%
4durB01 3.50.4.10 Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor 0.58 31.0 3.81e-01 80.5% 81.5%
3rjaA02 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.57 44.0 3.70e-01 82.8% 68.6%
2ijrA01 3.30.70.1270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Api92-like domains 0.57 40.0 4.46e-01 100.0% 94.8%
2wnyA00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.56 36.0 3.52e-01 100.0% 59.1%
4mt1A02 3.30.70.1430 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain 0.56 42.0 4.56e-01 78.9% 97.1%
5t0oA02 3.30.70.1430 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain 0.55 41.0 4.51e-01 78.9% 97.1%
5wm1A02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.55 42.0 4.52e-01 99.2% 95.4%
4dezA01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.55 39.0 4.41e-01 99.2% 97.0%
4tqrA01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.54 40.0 4.44e-01 99.2% 99.0%
4pvkA03 3.40.462.20 Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › 0.54 42.0 3.76e-01 81.2% 69.5%
2bf3B00 3.90.56.10 Alpha Beta › Alpha-Beta Complex › Phenol Hydroxylase P2 Protein › Monooxygenase component MmoB/DmpM 0.53 34.0 3.95e-01 93.8% 92.0%
1darA05 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 34.0 3.94e-01 86.7% 96.6%
1x9zA02 3.30.1370.100 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › MutL, C-terminal domain, regulatory subdomain 0.52 34.0 3.97e-01 95.3% 95.5%
5koxA02 3.30.70.2450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 34.0 3.90e-01 82.0% 98.8%
4qmfB01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.51 33.0 3.87e-01 95.3% 100.0%
2iboA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 33.0 3.77e-01 80.5% 93.3%
1vk8A00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 33.0 3.73e-01 80.5% 90.3%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2721360 862.1.1.0 a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain 0.87 73.0 6.29e-01 92.2% 60.0%
2711606 862.1.1.5 a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol 0.80 74.0 5.38e-01 100.0% 56.8%
5011497 862.1.1.0 a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain 0.80 65.0 5.45e-01 85.9% 54.0%
4394681 862.1.1.4 a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › RepB_primase 0.79 69.0 5.74e-01 90.6% 57.6%
4986859 862.1.1.5 a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol 0.79 68.0 5.10e-01 90.6% 58.6%
3602638 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.79 70.0 4.81e-01 93.8% 34.3%
4956744 862.1.1.1 a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S 0.79 59.0 4.64e-01 78.1% 61.6%
4552974 862.1.1.1 a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S 0.79 59.0 4.73e-01 78.1% 59.2%
185296 862.1.1.4 a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › RepB_primase 0.79 70.0 5.89e-01 95.3% 59.8%
None 0.78 70.0 5.20e-01 96.1% 57.1%
4442634 862.1.1.1 a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S 0.78 58.0 4.39e-01 77.3% 65.9%
3959043 862.1.1.0 a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain 0.78 72.0 5.29e-01 100.0% 58.5%
3284431 862.1.1.5 a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol 0.77 70.0 5.17e-01 97.7% 57.1%
5066297 862.1.1.5 a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol 0.76 68.0 5.20e-01 95.3% 70.2%
5050906 862.1.1.0 a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain 0.76 67.0 5.00e-01 96.1% 68.6%
5000831 862.1.1.5 a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › LigD_Prim-Pol 0.75 64.0 4.92e-01 90.6% 68.7%
4031372 862.1.1.12 a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › PF29905 0.73 64.0 5.48e-01 96.1% 60.0%
3989046 862.1.1.8 a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › AEP-TOTE 0.73 63.0 5.17e-01 93.0% 65.8%
4032691 304.150.1.1 a+b two layers › Alpha-beta plaits › Adapter protein mecA 2 C-terminal domain › Adapter protein mecA 2 C-terminal domain › MecA 0.66 44.0 4.97e-01 79.7% 90.5%
4667955 304.150.1.0 a+b two layers › Alpha-beta plaits › Adapter protein mecA 2 C-terminal domain › Adapter protein mecA 2 C-terminal domain 0.65 43.0 4.88e-01 79.7% 90.5%
4621902 304.150.1.1 a+b two layers › Alpha-beta plaits › Adapter protein mecA 2 C-terminal domain › Adapter protein mecA 2 C-terminal domain › MecA 0.65 44.0 4.90e-01 78.9% 89.0%
3826050 304.48.1.21 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Thg1,Thg1C 0.65 50.0 3.91e-01 82.0% 90.9%
3640423 304.48.1.21 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Thg1,Thg1C 0.64 50.0 3.96e-01 82.0% 92.7%
4167612 304.150.1.1 a+b two layers › Alpha-beta plaits › Adapter protein mecA 2 C-terminal domain › Adapter protein mecA 2 C-terminal domain › MecA 0.64 43.0 4.82e-01 78.9% 89.0%
4038624 304.150.1.1 a+b two layers › Alpha-beta plaits › Adapter protein mecA 2 C-terminal domain › Adapter protein mecA 2 C-terminal domain › MecA 0.64 43.0 4.77e-01 81.2% 88.8%
4552838 304.150.1.1 a+b two layers › Alpha-beta plaits › Adapter protein mecA 2 C-terminal domain › Adapter protein mecA 2 C-terminal domain › MecA 0.63 41.0 4.71e-01 78.9% 91.4%
3588331 304.150.1.1 a+b two layers › Alpha-beta plaits › Adapter protein mecA 2 C-terminal domain › Adapter protein mecA 2 C-terminal domain › MecA 0.62 42.0 4.77e-01 79.7% 93.7%
3186355 304.48.1.21 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Thg1,Thg1C 0.62 48.0 3.78e-01 83.6% 80.6%
4540762 304.150.1.1 a+b two layers › Alpha-beta plaits › Adapter protein mecA 2 C-terminal domain › Adapter protein mecA 2 C-terminal domain › MecA 0.61 42.0 4.54e-01 78.9% 85.6%
4973396 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.61 48.0 4.27e-01 83.6% 93.3%
4350848 304.150.1.1 a+b two layers › Alpha-beta plaits › Adapter protein mecA 2 C-terminal domain › Adapter protein mecA 2 C-terminal domain › MecA 0.60 41.0 4.65e-01 78.9% 94.7%
4574112 304.150.1.1 a+b two layers › Alpha-beta plaits › Adapter protein mecA 2 C-terminal domain › Adapter protein mecA 2 C-terminal domain › MecA 0.60 41.0 4.60e-01 78.9% 93.7%
5047466 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.58 36.0 4.26e-01 82.0% 92.9%
5034651 304.4.1.1 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.58 41.0 4.58e-01 82.0% 97.9%
4226269 882.1.1.4 a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding 0.57 37.0 3.50e-01 100.0% 54.7%
3226096 390.1.1.1 few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.57 31.0 3.78e-01 79.7% 81.2%
5082753 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.56 42.0 4.54e-01 85.9% 95.2%
3615512 305.2.1.0 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) 0.56 36.0 3.72e-01 92.2% 68.3%
3368071 390.1.1.0 few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like 0.56 30.0 3.60e-01 78.9% 76.5%
3414869 390.1.1.4 few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › MANEC 0.56 31.0 3.58e-01 79.7% 75.6%
5051739 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.55 46.0 3.08e-01 93.0% 38.1%
5052911 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.55 44.0 3.07e-01 88.3% 47.2%
3217661 390.1.1.1 few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 0.54 31.0 3.65e-01 79.7% 83.5%
3999364 304.24.1.1 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C 0.54 36.0 3.98e-01 85.9% 87.8%
4929225 304.8.1.10 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 0.51 37.0 3.57e-01 75.8% 70.7%
D6 medium residues 445-488_615-674
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3t57A02 1.20.1180.10 Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain 0.55 30.0 3.44e-01 82.7% 72.0%
2jnsA01 1.20.1270.220 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.51 26.0 2.92e-01 93.3% 59.3%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3844081 4133.1.1.1 alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › ENT 0.55 34.0 3.56e-01 79.8% 67.4%
3927989 4133.1.1.1 alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › ENT 0.53 31.0 3.30e-01 80.8% 65.6%
D7 medium residues 489-614
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19263.6 best DUF5906 72.0 9.10e-20 89.7% 98.2%
CATH (64)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tueD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.79 72.0 6.09e-01 100.0% 60.9%
1in4A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 65.0 6.12e-01 100.0% 76.5%
1g8pA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.74 68.0 5.78e-01 100.0% 87.4%
3ja8204 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 65.0 4.73e-01 100.0% 43.7%
2c9oA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 65.0 5.53e-01 100.0% 73.5%
7jgsG01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 64.0 5.82e-01 99.2% 89.1%
4akgA15 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 59.0 5.94e-01 100.0% 91.4%
4akgA12 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 60.0 6.22e-01 98.4% 100.0%
3bosB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 62.0 5.69e-01 100.0% 75.3%
7tjhE01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 62.0 5.51e-01 99.2% 90.4%
2qbyA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 63.0 5.61e-01 100.0% 86.7%
1cr2A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 63.0 5.02e-01 100.0% 70.7%
3vkgA10 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 61.0 5.29e-01 100.0% 81.1%
1l8qA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 62.0 5.62e-01 100.0% 80.0%
4wiaC00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 62.0 5.06e-01 100.0% 71.7%
2b8tA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 62.0 5.97e-01 99.2% 100.0%
8dgfB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 62.0 5.32e-01 100.0% 68.6%
5bq5B00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 61.0 5.34e-01 100.0% 72.7%
2orwB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 60.0 6.02e-01 99.2% 100.0%
3eccA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 60.0 5.48e-01 100.0% 86.4%
2xgjB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 60.0 5.02e-01 99.2% 94.7%
4r7zA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 58.0 4.32e-01 100.0% 45.6%
4ceiB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 57.0 5.04e-01 98.4% 100.0%
8ipqB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 57.0 4.90e-01 97.6% 94.2%
2kjqA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 52.0 5.24e-01 98.4% 88.9%
4xcxA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 53.0 4.44e-01 93.7% 86.6%
3jwhA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 53.0 4.58e-01 92.9% 93.7%
3berA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 54.0 4.49e-01 98.4% 76.4%
3dmnA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 54.0 5.01e-01 99.2% 95.0%
3rhfD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 53.0 4.18e-01 100.0% 61.6%
1yksA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 52.0 4.64e-01 95.2% 92.2%
7mi0A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.59 38.0 3.39e-01 74.6% 44.1%
3czpB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 52.0 4.45e-01 100.0% 71.8%
2kpoA00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 38.0 4.07e-01 100.0% 76.4%
1rkuA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.58 40.0 4.20e-01 95.2% 79.3%
1gg1A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 51.0 3.78e-01 100.0% 72.3%
1bifA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 51.0 4.37e-01 100.0% 90.3%
4c6sA00 3.40.50.10140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain 0.57 45.0 4.40e-01 92.1% 76.8%
3a4lB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 51.0 4.57e-01 100.0% 85.4%
3fniA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.57 47.0 4.47e-01 96.0% 75.3%
5bu6A00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.56 44.0 3.49e-01 84.9% 66.7%
1m8pA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 50.0 4.43e-01 100.0% 85.9%
3vusB00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.55 44.0 3.48e-01 84.9% 66.0%
3cyjA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.55 49.0 4.00e-01 98.4% 88.2%
3g23A02 3.50.30.60 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › LD-carboxypeptidase A C-terminal domain-like 0.55 41.0 4.43e-01 80.2% 94.3%
1zemA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 48.0 3.83e-01 97.6% 96.5%
3ch4B00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 48.0 4.23e-01 100.0% 83.0%
7z67A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 49.0 4.08e-01 100.0% 57.8%
3bdvA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 44.0 3.89e-01 91.3% 83.2%
4fhzA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 43.0 3.60e-01 88.1% 74.1%
6vhyC01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.53 45.0 3.17e-01 92.1% 41.9%
1tt5C01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 44.0 3.31e-01 91.3% 86.5%
2vsqA03 3.40.50.980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 43.0 3.82e-01 100.0% 60.0%
3uwpA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 45.0 3.75e-01 94.4% 82.7%
3hcwA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 44.0 4.24e-01 92.9% 90.9%
2g5cA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 42.0 3.83e-01 92.9% 65.1%
4gr4C02 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.52 43.0 3.08e-01 91.3% 39.5%
2i7xA02 3.40.50.10890 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 46.0 4.04e-01 99.2% 92.6%
4bpyA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 35.0 3.26e-01 83.3% 53.4%
1osnC00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 46.0 3.49e-01 100.0% 86.9%
5ix8A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 43.0 4.05e-01 92.9% 84.9%
4j0eA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 40.0 3.51e-01 86.5% 100.0%
6ln3A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 45.0 3.89e-01 100.0% 79.7%
3og9A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 41.0 3.50e-01 88.1% 75.7%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3253892 2004.1.1.409 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.89 80.0 6.72e-01 100.0% 60.5%
3945876 2004.1.1.409 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.84 78.0 5.91e-01 100.0% 46.4%
4959586 2004.1.1.409 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.83 78.0 5.87e-01 100.0% 46.6%
5029777 2004.1.1.409 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.82 78.0 6.01e-01 100.0% 49.8%
5081314 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.82 76.0 5.84e-01 100.0% 47.7%
5022020 2004.1.1.409 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.82 77.0 5.88e-01 100.0% 49.8%
5011495 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.82 77.0 6.44e-01 100.0% 64.5%
5003620 2004.1.1.409 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.81 76.0 5.46e-01 100.0% 37.9%
4033843 2004.1.1.313 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › VapE-like_dom 0.79 69.0 5.92e-01 100.0% 60.5%
2810781 8001.1.1.1 alpha arrays › N-terminal domain of large tumor antigen › N-terminal domain of large tumor antigen › N-terminal domain of large tumor antigen › PPV_E1_C 0.77 71.0 5.79e-01 100.0% 56.1%
4926850 2004.1.1.22 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activat 0.77 68.0 6.34e-01 100.0% 76.8%
4931926 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.76 70.0 5.17e-01 100.0% 39.7%
4314819 2004.1.1.58 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase 0.75 70.0 5.99e-01 100.0% 65.1%
3677397 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 69.0 4.54e-01 100.0% 29.8%
None 0.75 69.0 4.75e-01 100.0% 36.6%
3465917 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 69.0 4.58e-01 100.0% 31.2%
3476274 2004.1.1.418 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase 0.74 69.0 5.28e-01 100.0% 54.5%
4017535 2004.1.1.418 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase 0.74 69.0 5.06e-01 100.0% 47.6%
4013468 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 69.0 5.26e-01 100.0% 54.5%
None 0.74 69.0 4.91e-01 100.0% 42.9%
4030223 2004.1.1.418 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase 0.74 68.0 5.27e-01 100.0% 55.6%
5003899 2004.1.1.46 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM 0.74 69.0 5.21e-01 100.0% 53.2%
3197159 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 69.0 4.66e-01 100.0% 35.1%
None 0.74 69.0 4.52e-01 100.0% 30.9%
3695173 2004.1.1.46 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM 0.74 68.0 5.09e-01 100.0% 50.0%
None 0.73 68.0 6.23e-01 99.2% 80.0%
4224436 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.73 68.0 5.28e-01 100.0% 91.9%
4812297 2004.1.1.55 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RNA_helicase 0.73 65.0 5.64e-01 100.0% 63.5%
3550992 2004.1.1.418 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM, Mg_chelatase 0.73 67.0 5.22e-01 100.0% 56.2%
5025359 2004.1.1.46 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM 0.73 67.0 5.14e-01 100.0% 54.9%
3663724 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.73 66.0 5.85e-01 100.0% 70.3%
3458089 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.73 62.0 5.28e-01 100.0% 58.5%
4959355 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 67.0 5.24e-01 100.0% 65.9%
5057591 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.72 58.0 5.73e-01 100.0% 79.3%
2704206 2004.1.1.57 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Parvo_NS1 0.72 67.0 5.12e-01 100.0% 47.1%
4318504 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.72 66.0 5.99e-01 100.0% 87.1%
None 0.72 67.0 4.68e-01 100.0% 38.7%
4991153 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 67.0 5.71e-01 100.0% 87.2%
4542391 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 66.0 5.24e-01 100.0% 53.2%
4069782 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 66.0 5.14e-01 100.0% 48.7%
3224330 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.71 63.0 6.08e-01 100.0% 85.0%
3575760 2004.1.1.183 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_9 0.71 63.0 5.64e-01 100.0% 68.6%
4967912 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.71 66.0 6.01e-01 100.0% 83.0%
3390911 138.1.1.13 alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › AAA 0.71 65.0 4.74e-01 100.0% 40.9%
4974760 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 64.0 5.53e-01 100.0% 82.1%
3377628 2004.1.1.46 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM 0.70 65.0 5.60e-01 100.0% 82.1%
1112963 2004.1.1.35 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Bac_DnaA 0.69 62.0 5.98e-01 100.0% 85.3%
3711499 2004.1.1.183 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_9 0.69 62.0 5.49e-01 100.0% 67.8%
4871183 2004.1.1.432 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, Rad17 0.69 64.0 5.81e-01 100.0% 81.2%
3707702 2004.1.1.183 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_9 0.69 62.0 5.83e-01 100.0% 81.3%
3967690 2004.1.1.319 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF815 0.69 63.0 5.46e-01 100.0% 67.0%
3597853 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 62.0 5.64e-01 100.0% 75.8%
4002451 2004.1.1.93 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynein_heavy 0.67 61.0 5.37e-01 100.0% 67.6%
5016677 2004.1.1.319 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF815 0.67 62.0 5.08e-01 100.0% 61.3%
3593708 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 60.0 4.61e-01 100.0% 78.5%
4024728 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.65 59.0 4.69e-01 100.0% 63.6%
3605416 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.63 57.0 5.12e-01 100.0% 82.9%
5064586 2003.1.1.367 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DEAD 0.60 51.0 4.47e-01 92.1% 96.8%
4367798 2004.1.1.65 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › 6PF2K 0.57 51.0 4.31e-01 100.0% 85.5%
3782118 207.1.1.367 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP, LRR_5, LRR_6 0.57 48.0 3.19e-01 92.1% 30.4%
3276385 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.57 42.0 3.16e-01 77.8% 47.6%
4368035 2007.2.1.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins 0.57 47.0 4.38e-01 96.0% 71.2%
2527681 2002.1.1.35 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DAHP_synth_1 0.57 50.0 3.65e-01 100.0% 67.1%
4355857 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.56 47.0 3.80e-01 92.1% 65.7%
4131081 2007.2.1.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_1 0.55 46.0 4.34e-01 96.0% 72.5%
4848970 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.55 45.0 4.07e-01 100.0% 63.6%
3716289 2004.1.1.208 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 0.55 48.0 4.41e-01 96.0% 95.8%
None 0.55 49.0 4.26e-01 100.0% 83.0%
3226631 2004.1.1.41 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK 0.55 49.0 4.17e-01 100.0% 79.0%
3227257 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 46.0 4.01e-01 99.2% 61.6%
3619659 2004.1.1.41 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK 0.54 49.0 3.36e-01 100.0% 39.5%
5047034 2004.1.1.163 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › KTI12 0.54 47.0 4.24e-01 100.0% 82.7%
3696347 2004.1.1.208 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 0.54 47.0 4.10e-01 100.0% 73.4%
1148175 2002.3.1.2 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Polysacc_deac_1 0.53 44.0 3.44e-01 88.1% 79.9%
3669524 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.53 42.0 3.58e-01 100.0% 51.0%
3637340 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.53 45.0 3.54e-01 92.1% 60.0%
4662492 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.53 45.0 3.96e-01 92.1% 88.1%
2605492 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.53 44.0 3.91e-01 88.9% 85.5%
3227256 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.53 45.0 3.77e-01 95.2% 73.3%
3617931 2004.1.1.208 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 0.52 46.0 4.00e-01 100.0% 84.4%
4942141 2004.1.1.64 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › APS_kinase 0.52 46.0 4.15e-01 100.0% 90.6%
5012482 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 47.0 3.99e-01 100.0% 78.5%
3970145 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.52 43.0 3.50e-01 100.0% 46.4%
4958499 7584.1.1.0 a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins 0.52 44.0 3.26e-01 92.1% 50.6%
3277306 207.1.1.12 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FNIP 0.51 38.0 2.43e-01 77.8% 29.6%
5049911 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.51 44.0 3.18e-01 92.9% 33.5%
3278119 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.51 43.0 3.87e-01 91.3% 85.1%
3291251 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.50 45.0 3.36e-01 100.0% 38.6%