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MW960032.1__QWY83226.1__X__00020

Bact-Vir

MW960032.1__QWY83226.1__X__00020

Identity

Accession:
MW960032 ↗
Kingdom:
phage

Quality

95.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Rhizobium_phage_RHph_X2_25

TaxID: 2836083

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-54
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2q18X01 3.10.330.40 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.62 44.0 4.05e-01 98.0% 57.1%
2ysiA01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.61 33.0 3.88e-01 88.2% 72.7%
1wxrA03 3.30.160.280 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.59 46.0 4.15e-01 100.0% 60.5%
3h09A03 3.30.160.280 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 47.0 4.05e-01 100.0% 55.7%
2glzA00 3.30.1330.130 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › 0.53 36.0 2.72e-01 70.6% 77.2%
4bpnW02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.51 34.0 3.45e-01 80.4% 70.6%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3402874 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.63 37.0 3.46e-01 100.0% 46.2%
3515285 64.1.1.1 ↗ beta meanders › WW domain-like › WW domain › WW domain › WW 0.62 34.0 4.04e-01 90.2% 83.3%
3897880 3935.1.1.1 ↗ extended segments › 4E-BP2 › 4E-BP2 › 4E-BP2 › eIF_4EBP 0.57 33.0 3.26e-01 98.0% 50.9%
3199044 5001.1.1.88 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › STE2 0.56 42.0 2.81e-01 92.2% 76.8%
4928472 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.52 36.0 3.20e-01 74.5% 77.5%
3970682 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.52 38.0 2.27e-01 92.2% 31.9%