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MW960037.1__QWY83610.1__X__00056
Bact-VirMW960037.1__QWY83610.1__X__00056
Identity
- Accession:
- MW960037 ↗
- Kingdom:
- phage
Quality
74.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-94
Domain cluster:
rep: MN549360.1__QGZ13910.1__RL38J1_034__00034__D1-75
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1h3lB00 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.92 | 74.0 | 7.66e-01 | 85.5% | 88.5% |
| 2o7gA00 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.87 | 70.0 | 6.91e-01 | 85.5% | 79.5% |
| 1or7B01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.86 | 73.0 | 6.99e-01 | 90.4% | 88.3% |
| 4qicC01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.86 | 67.0 | 5.72e-01 | 85.5% | 54.4% |
| 4nqwA01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.83 | 70.0 | 7.04e-01 | 89.2% | 96.4% |
| 2lfwA01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.81 | 68.0 | 5.61e-01 | 92.8% | 52.5% |
| 4cxfA01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.75 | 63.0 | 6.20e-01 | 89.2% | 93.1% |
| 6ldiF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 57.0 | 5.50e-01 | 86.7% | 74.0% |
| 3bosA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.72 | 45.0 | 4.91e-01 | 73.5% | 77.6% |
| 5xs2B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.70 | 54.0 | 4.61e-01 | 86.7% | 51.5% |
| 1m6nA04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.69 | 57.0 | 4.89e-01 | 91.6% | 75.6% |
| 4ae4A00 | 1.20.120.1920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › UBAP1 SOUBA domain | 0.69 | 46.0 | 4.14e-01 | 90.4% | 50.0% |
| 6t4hA03 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.67 | 53.0 | 4.17e-01 | 84.3% | 100.0% |
| 2g8lB01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.66 | 48.0 | 5.16e-01 | 84.3% | 95.5% |
| 1olmC01 | 3.40.525.10 | Alpha Beta › 3-Layer(aba) Sandwich › Phosphatidylinositol Transfer Protein Sec14p › CRAL-TRIO lipid binding domain | 0.62 | 48.0 | 3.28e-01 | 80.7% | 65.0% |
| 4h33A00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 46.0 | 4.44e-01 | 94.0% | 75.8% |
| 3if8B02 | 1.20.58.730 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 44.0 | 4.15e-01 | 81.9% | 74.0% |
| 4i3vA01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.57 | 43.0 | 3.04e-01 | 81.9% | 61.3% |
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.56 | 38.0 | 3.78e-01 | 71.1% | 65.5% |
| 4dvyP01 | 1.10.357.130 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.56 | 48.0 | 3.69e-01 | 96.4% | 76.1% |
| 2pbxA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 39.0 | 2.99e-01 | 71.1% | 32.5% |
| 5j6bD01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.56 | 44.0 | 3.05e-01 | 85.5% | 64.8% |
| 4lp8A01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 45.0 | 4.13e-01 | 96.4% | 69.2% |
| 1yowA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.55 | 49.0 | 3.56e-01 | 100.0% | 93.9% |
| 1s35A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 43.0 | 4.03e-01 | 83.1% | 96.0% |
| 4hstB03 | 1.10.1400.10 | Mainly Alpha › Orthogonal Bundle › Penicillin amidase (Acylase) alpha subunit, N-terminal domain › Aminohydrolase, alpha-helical knob region | 0.53 | 41.0 | 3.64e-01 | 84.3% | 92.2% |
| 3buxB01 | 1.20.930.20 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Adaptor protein Cbl, N-terminal domain | 0.53 | 40.0 | 3.53e-01 | 81.9% | 93.8% |
| 1lzwA00 | 3.30.1390.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L30; Chain: A, › Ribosomal protein L7/L12, C-terminal domain/Adaptor protein ClpS | 0.52 | 37.0 | 3.65e-01 | 74.7% | 76.9% |
| 4nqfA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.52 | 41.0 | 3.41e-01 | 84.3% | 72.4% |
| 3rh9A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 40.0 | 2.80e-01 | 85.5% | 63.7% |
| 2hg2A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 40.0 | 2.81e-01 | 85.5% | 63.3% |
| 3ls1A00 | 1.20.120.290 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle | 0.51 | 39.0 | 3.36e-01 | 83.1% | 52.6% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3279339 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.90 | 79.0 | 5.92e-01 | 97.6% | 41.6% |
| 4216342 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.87 | 72.0 | 7.53e-01 | 89.2% | 96.0% |
| 4201640 | 142.1.1.8 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › PhyR_sigma2 | 0.87 | 73.0 | 7.65e-01 | 91.6% | 97.3% |
| 4508577 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.87 | 81.0 | 7.04e-01 | 100.0% | 77.5% |
| 4509501 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.87 | 80.0 | 7.22e-01 | 100.0% | 84.5% |
| 4326169 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.86 | 76.0 | 7.41e-01 | 97.6% | 87.8% |
| 4033886 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.85 | 78.0 | 7.31e-01 | 100.0% | 86.0% |
| 3284058 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.84 | 76.0 | 7.55e-01 | 97.6% | 94.1% |
| 2389466 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.83 | 66.0 | 6.56e-01 | 83.1% | 92.9% |
| 3953375 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.83 | 76.0 | 6.80e-01 | 97.6% | 83.6% |
| 4876272 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.77 | 67.0 | 6.36e-01 | 95.2% | 92.8% |
| 4623581 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.76 | 68.0 | 6.28e-01 | 100.0% | 83.8% |
| 5078898 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.72 | 56.0 | 5.10e-01 | 85.5% | 62.7% |
| 3260787 | 143.1.1.1 ↗ | alpha arrays › PABP domain-like › PABC(PABP) domain › PABC(PABP) domain › PABP | 0.66 | 52.0 | 5.47e-01 | 91.6% | 94.7% |
| 4203116 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.66 | 49.0 | 5.37e-01 | 78.3% | 100.0% |
| 3269505 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.66 | 53.0 | 5.07e-01 | 90.4% | 77.0% |
| 3246383 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.64 | 49.0 | 5.27e-01 | 86.7% | 100.0% |
| 3732045 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.62 | 55.0 | 3.92e-01 | 100.0% | 61.6% |
| 3964811 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.61 | 48.0 | 3.62e-01 | 84.3% | 50.5% |
| 4932254 | 3962.1.1.0 ↗ | alpha arrays › N-terminal helical domain in restriction-modification system methylation subunit-like › N-terminal helical domain in restriction-modification system methylation subunit › N-terminal helical domain in restriction-modification system methylation subunit | 0.60 | 43.0 | 3.63e-01 | 77.1% | 49.0% |
| 3528012 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.59 | 48.0 | 3.45e-01 | 86.7% | 84.4% |
| 3589614 | 601.1.2.99 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › DAGK_prokar | 0.59 | 43.0 | 3.79e-01 | 77.1% | 60.2% |
| 5042372 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.59 | 45.0 | 4.15e-01 | 96.4% | 64.4% |
| 3395749 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.58 | 46.0 | 3.85e-01 | 94.0% | 51.1% |
| 5013034 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.57 | 42.0 | 4.16e-01 | 94.0% | 72.2% |
| 5058191 | 7524.1.1.1 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh | 0.57 | 43.0 | 3.20e-01 | 80.7% | 65.1% |
| 5035274 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.56 | 45.0 | 3.91e-01 | 84.3% | 78.3% |
| 4016062 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.55 | 41.0 | 4.13e-01 | 79.5% | 85.9% |
| 3742018 | 7094.1.1.2 ↗ | alpha bundles › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › LIS_MGM1 | 0.55 | 42.0 | 4.02e-01 | 79.5% | 74.7% |
| 3741003 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.54 | 42.0 | 3.46e-01 | 84.3% | 83.2% |
| 3899800 | 621.1.1.0 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0.54 | 45.0 | 3.69e-01 | 91.6% | 78.7% |
| 3441543 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.54 | 37.0 | 3.30e-01 | 78.3% | 52.7% |
| 3910500 | 3991.1.1.1 ↗ | alpha bundles › Rabin8 C-terminal domain › Rabin8 C-terminal domain › Rabin8 C-terminal domain › DUF4211 | 0.53 | 41.0 | 3.13e-01 | 85.5% | 88.6% |
| 4140504 | 632.22.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA | 0.52 | 41.0 | 3.98e-01 | 88.0% | 90.5% |
| 4090640 | 632.22.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA | 0.52 | 41.0 | 3.99e-01 | 89.2% | 91.6% |
| 3393913 | 109.4.1.1209 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SURF4 | 0.52 | 39.0 | 2.88e-01 | 83.1% | 30.8% |
| 4986503 | 7524.1.1.1 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh | 0.50 | 39.0 | 3.06e-01 | 85.5% | 89.5% |
D2
medium
residues 123-183
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3t0yA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 71.0 | 7.20e-01 | 91.8% | 98.3% |
| 2lfwA01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.81 | 68.0 | 5.11e-01 | 91.8% | 42.6% |
| 3p7nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 64.0 | 6.06e-01 | 88.5% | 79.2% |
| 4izzB02 | 1.10.10.1680 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain | 0.78 | 53.0 | 5.17e-01 | 72.1% | 72.1% |
| 2w7nA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.73 | 59.0 | 5.16e-01 | 90.2% | 64.9% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 57.0 | 5.34e-01 | 85.2% | 84.2% |
| 6v7xB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 50.0 | 5.18e-01 | 72.1% | 100.0% |
| 2elhA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 50.0 | 4.95e-01 | 73.8% | 69.7% |
| 1fc3B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 58.0 | 4.96e-01 | 91.8% | 71.3% |
| 5f64A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 56.0 | 5.26e-01 | 86.9% | 73.3% |
| 1g3nC01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.70 | 60.0 | 4.74e-01 | 93.4% | 62.5% |
| 2f2cA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.69 | 58.0 | 4.83e-01 | 93.4% | 74.5% |
| 2nn4A00 | 1.10.287.760 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like | 0.69 | 45.0 | 4.52e-01 | 78.7% | 66.1% |
| 1y88A02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.69 | 49.0 | 5.02e-01 | 75.4% | 100.0% |
| 2bnlC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.68 | 59.0 | 4.63e-01 | 100.0% | 66.4% |
| 1l3lA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 49.0 | 4.93e-01 | 78.7% | 95.2% |
| 4a18Q01 | 1.10.10.1760 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L36 | 0.66 | 46.0 | 4.47e-01 | 73.8% | 76.8% |
| 2f2cA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.66 | 55.0 | 4.56e-01 | 93.4% | 67.9% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 43.0 | 4.31e-01 | 83.6% | 67.7% |
| 3ckyA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.61 | 44.0 | 3.46e-01 | 77.0% | 66.4% |
| 3nkhA00 | 1.10.443.10 | Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core | 0.61 | 47.0 | 3.35e-01 | 90.2% | 67.4% |
| 1jkwA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.61 | 49.0 | 3.68e-01 | 95.1% | 81.2% |
| 1cxzB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.59 | 43.0 | 3.84e-01 | 85.2% | 54.7% |
| 3vayA02 | 1.20.120.1600 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.58 | 46.0 | 4.21e-01 | 91.8% | 98.9% |
| 3rq9A00 | 1.10.287.2500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 43.0 | 3.99e-01 | 80.3% | 71.8% |
| 1u5pA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 42.0 | 3.48e-01 | 86.9% | 44.4% |
| 1rx0C01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.57 | 41.0 | 3.34e-01 | 83.6% | 39.0% |
| 2go7A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.56 | 45.0 | 4.39e-01 | 88.5% | 97.0% |
| 4pxoA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.56 | 44.0 | 3.48e-01 | 96.7% | 40.5% |
| 4a17U01 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 39.0 | 3.70e-01 | 85.2% | 61.0% |
| 1bhaA00 | 1.10.287.170 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 43.0 | 4.19e-01 | 86.9% | 95.5% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.54 | 42.0 | 3.97e-01 | 90.2% | 100.0% |
| 1fi2A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 44.0 | 3.10e-01 | 91.8% | 90.5% |
| 5ha6B00 | 1.10.287.210 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 41.0 | 3.75e-01 | 82.0% | 97.5% |
| 3r84B00 | 6.10.280.160 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 | 0.52 | 42.0 | 3.89e-01 | 90.2% | 86.3% |
| 2yqyA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.52 | 43.0 | 3.47e-01 | 96.7% | 81.7% |
| 2qe7G01 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.50 | 39.0 | 3.47e-01 | 90.2% | 95.9% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4987929 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.83 | 62.0 | 6.27e-01 | 78.7% | 81.7% |
| 4606105 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.81 | 63.0 | 5.20e-01 | 82.0% | 73.0% |
| 4031535 | 101.1.1.275 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › GerE | 0.81 | 66.0 | 6.71e-01 | 90.2% | 98.3% |
| 3973360 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.78 | 68.0 | 6.53e-01 | 96.7% | 91.4% |
| 4139052 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 69.0 | 6.46e-01 | 100.0% | 85.3% |
| 3794969 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 53.0 | 5.77e-01 | 72.1% | 88.0% |
| 3793383 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.76 | 55.0 | 5.41e-01 | 77.0% | 100.0% |
| 3971395 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.76 | 66.0 | 6.15e-01 | 96.7% | 86.7% |
| 1810916 | 101.1.1.71 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › KORA | 0.74 | 59.0 | 5.84e-01 | 88.5% | 93.8% |
| 3968864 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.72 | 65.0 | 6.06e-01 | 100.0% | 97.3% |
| 3941460 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.72 | 51.0 | 5.08e-01 | 75.4% | 73.8% |
| 3967757 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.71 | 61.0 | 5.74e-01 | 95.1% | 80.0% |
| 4008046 | 101.1.1.348 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF30461 | 0.71 | 49.0 | 5.35e-01 | 73.8% | 88.0% |
| 3662896 | 101.1.1.411 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r2 | 0.70 | 50.0 | 3.94e-01 | 75.4% | 55.2% |
| 4987913 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.69 | 47.0 | 4.85e-01 | 72.1% | 100.0% |
| 3961692 | 101.1.1.300 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_30 | 0.67 | 54.0 | 4.70e-01 | 90.2% | 74.7% |
| 3940372 | 2006.1.1.44 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like | 0.66 | 58.0 | 3.80e-01 | 100.0% | 33.7% |
| 5042936 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 46.0 | 4.51e-01 | 86.9% | 70.8% |
| 4597170 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.63 | 48.0 | 4.59e-01 | 82.0% | 91.4% |
| 3626769 | 192.5.1.14 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA | 0.62 | 46.0 | 4.08e-01 | 85.2% | 54.4% |
| 3925617 | 192.5.1.14 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA | 0.60 | 45.0 | 4.06e-01 | 85.2% | 57.6% |
| 4996856 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 42.0 | 4.14e-01 | 75.4% | 93.8% |
| 3519972 | 192.5.1.14 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA | 0.59 | 44.0 | 3.92e-01 | 85.2% | 54.4% |
| 4023352 | 301.6.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › Tubulin_C | 0.59 | 46.0 | 3.24e-01 | 86.9% | 65.0% |
| 4429833 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.58 | 44.0 | 3.60e-01 | 85.2% | 44.5% |
| 3529707 | 4.1.1.453 ↗ | beta barrels › SH3 › SH3 › SH3 › HR1_TOCA | 0.57 | 44.0 | 3.82e-01 | 83.6% | 65.3% |
| 3567670 | 192.5.1.14 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA | 0.57 | 42.0 | 3.74e-01 | 85.2% | 54.4% |
| 3213526 | 192.5.1.14 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1_TOCA | 0.57 | 42.0 | 3.54e-01 | 85.2% | 46.7% |
| 5046057 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.55 | 39.0 | 3.88e-01 | 85.2% | 72.3% |
| 4540906 | 101.1.4.82 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF3603 | 0.55 | 48.0 | 4.20e-01 | 100.0% | 79.8% |
| 3547722 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.53 | 45.0 | 3.15e-01 | 96.7% | 50.0% |