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MW960037.1QWY83671.1X__00117

Bact-Vir

MW960037.1__QWY83671.1__X__00117

Identity

Accession:: MW960037 ↗
Kingdom:: phage

Quality

90.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Rhizobium_phage_RHph_X2_26

TaxID: 2836080

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-65

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3ripA02	1.20.120.1900	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Gamma-tubulin complex, C-terminal domain	0.80	56.0	3.49e-01	72.9%	16.1%
2e62A01	6.10.140.420	Special › Helix non-globular › Helix Hairpins ›	0.78	42.0	4.46e-01	78.0%	59.6%
4i5sB03	1.10.287.130	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain	0.77	56.0	5.18e-01	78.0%	77.3%
5lnkA00	1.20.58.1610	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › NADH:ubiquinone/plastoquinone oxidoreductase, chain 3	0.76	46.0	3.67e-01	93.2%	32.2%
3rmiA00	1.20.59.10	Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase	0.65	54.0	4.65e-01	100.0%	87.6%
2ccyA00	1.20.120.10	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562	0.63	50.0	3.99e-01	89.8%	87.4%
2b7mA00	1.20.1280.170	Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70	0.62	51.0	3.08e-01	100.0%	34.1%
1uajA02	1.10.1270.20	Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › tRNA(m1g37)methyltransferase, domain 2	0.61	43.0	4.09e-01	76.3%	65.8%
2cw7A02	1.10.10.1010	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Intein homing endonuclease, domain IV	0.59	41.0	3.22e-01	76.3%	39.0%
4bx9C00	1.10.150.780	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Vps16, C-terminal region	0.57	43.0	3.62e-01	84.7%	49.5%
3q18A02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.54	41.0	3.39e-01	84.7%	73.3%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3842812	10.12.1.1 ↗	beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding	0.82	58.0	3.79e-01	72.9%	20.5%
4525341	5086.1.1.0 ↗	alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins	0.81	57.0	5.33e-01	72.9%	62.9%
4052416	192.4.1.1 ↗	alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › Ribosomal_L29	0.80	56.0	5.00e-01	72.9%	56.2%
3484968	109.4.1.192 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8	0.77	54.0	3.55e-01	72.9%	19.1%
3993730	141.1.1.1 ↗	alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › polyprenyl_synt	0.73	60.0	3.66e-01	89.8%	23.3%
3993403	616.1.1.26 ↗	alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › NPP-6_helical	0.73	58.0	4.07e-01	83.1%	31.2%
3229793	198.1.1.0 ↗	alpha arrays › Saposin-like › Saposin-like › Saposin-like	0.73	48.0	4.18e-01	88.1%	47.1%
3243178	109.4.1.228 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exo84_C	0.68	57.0	3.47e-01	93.2%	31.7%
4682722	237.1.1.5 ↗	a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › RolB_RolC	0.64	45.0	3.10e-01	72.9%	23.5%
3285567	5069.1.1.17 ↗	alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › DUF6529	0.62	54.0	3.87e-01	96.6%	60.3%