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MW960037.1__QWY83682.1__X__00128

Bact-Vir

MW960037.1__QWY83682.1__X__00128

Identity

Accession:
MW960037 ↗
Kingdom:
phage

Quality

84.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Rhizobium_phage_RHph_X2_26

TaxID: 2836080

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 37-126
PDB
Domain cluster: rep: KJ018209.1__AHK11305.1__S14_196__00193__D52-123
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1y4uB01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.73 34.0 2.59e-01 83.3% 20.6%
1bunB00 4.10.410.10 Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain 0.72 38.0 4.49e-01 77.8% 75.4%
2n3gA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.66 32.0 3.64e-01 70.0% 59.7%
3c4bA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.66 32.0 3.74e-01 73.3% 64.2%
1whnA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.63 31.0 3.05e-01 70.0% 42.6%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.54 41.0 3.48e-01 78.9% 70.1%
3gd0A02 3.30.920.50 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain 0.53 38.0 3.56e-01 75.6% 84.8%
1bikA00 4.10.410.10 Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain 0.52 39.0 3.62e-01 77.8% 76.4%
2g3aA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 32.0 3.03e-01 83.3% 52.4%
3ci6B00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.52 39.0 3.24e-01 81.1% 84.8%
4qunA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.50 39.0 2.79e-01 84.4% 59.0%
6igbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 37.0 2.51e-01 78.9% 51.2%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3390817 384.1.1.1 ↗ few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI 0.70 40.0 4.80e-01 77.8% 85.0%
3395024 384.1.1.1 ↗ few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI 0.68 37.0 4.43e-01 75.6% 80.0%
3520951 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.66 35.0 3.50e-01 73.3% 51.1%
3712451 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 59.0 5.32e-01 100.0% 81.6%
3177406 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 42.0 3.53e-01 71.1% 83.9%
3714156 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 42.0 4.32e-01 71.1% 88.2%
3674608 327.4.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › YhbC-like, N-terminal domain › YhbC-like, N-terminal domain 0.56 33.0 3.40e-01 70.0% 62.4%
3648535 4.1.1.25 ↗ beta barrels › SH3 › SH3 › SH3 › PAZ 0.52 36.0 3.01e-01 72.2% 68.1%
3960268 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 46.0 3.82e-01 100.0% 85.8%
4621593 2003.1.7.5 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › 5-FTHF_cyc-lig 0.50 37.0 2.94e-01 78.9% 42.8%
5069827 5.1.4.40 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.50 37.0 2.48e-01 78.9% 87.4%