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MW980063.1__QXV73733.1__X__00046

Bact-Vir

MW980063.1__QXV73733.1__X__00046

Identity

Accession:
MW980063 ↗
Kingdom:
phage

Quality

67.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-71
PDB
Domain cluster: representative
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2iz4A01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.71 48.0 5.08e-01 71.4% 100.0%
1pj5A04 3.30.70.1400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains 0.68 48.0 3.76e-01 75.0% 51.7%
3u6xS00 2.60.40.3320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.67 51.0 4.17e-01 82.1% 78.1%
6frlA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.67 52.0 3.01e-01 83.9% 9.8%
1pzdA02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.67 54.0 4.28e-01 89.3% 73.0%
5uaoC00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.66 50.0 2.91e-01 83.9% 8.9%
7cu8E01 3.40.1000.70 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain 0.66 55.0 3.93e-01 96.4% 57.1%
1m3qA01 3.30.310.40 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.65 45.0 3.93e-01 75.0% 66.3%
3dteA03 3.30.450.130 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › irre protein 0.64 51.0 4.42e-01 89.3% 100.0%
3fg8A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.62 46.0 3.81e-01 82.1% 89.6%
2aqjA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 54.0 3.11e-01 98.2% 47.6%
1cbiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 46.0 3.47e-01 80.4% 94.1%
3d8kD00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.62 52.0 3.23e-01 96.4% 26.0%
4qwoB00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.61 53.0 4.07e-01 98.2% 81.8%
3h0gH00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 51.0 3.95e-01 94.6% 66.1%
5akpA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.60 50.0 3.91e-01 94.6% 76.7%
2jpiA00 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.60 45.0 3.87e-01 83.9% 68.8%
3r1kA03 3.30.1050.10 Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain 0.60 41.0 3.47e-01 71.4% 44.8%
3f0zA01 3.30.310.260 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.59 48.0 3.89e-01 91.1% 53.6%
4tpsA00 3.30.310.250 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Sporulation inhibitor of replication protein SirA 0.59 43.0 3.33e-01 80.4% 76.4%
1ztuA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.58 47.0 3.51e-01 91.1% 61.6%
2wesA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 50.0 2.92e-01 98.2% 48.6%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 44.0 3.34e-01 83.9% 91.8%
2w42B02 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.57 46.0 3.14e-01 94.6% 35.5%
1egxA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 41.0 3.30e-01 78.6% 74.8%
4paaA02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.57 44.0 3.21e-01 92.9% 28.8%
2f68X01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 48.0 3.68e-01 98.2% 65.2%
7qu8A01 2.60.220.50 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › 0.57 44.0 3.07e-01 89.3% 56.2%
4mjgA00 3.30.2030.30 Alpha Beta › 2-Layer Sandwich › TBP-like › 0.57 47.0 3.45e-01 100.0% 52.0%
2vqaA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 46.0 3.33e-01 94.6% 51.4%
2z1pA01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 46.0 3.59e-01 98.2% 65.0%
1q1rA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.56 45.0 3.85e-01 96.4% 53.7%
3ms6A00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.56 44.0 3.95e-01 96.4% 96.7%
3tfmA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 45.0 3.62e-01 89.3% 71.6%
1lshB00 2.20.90.10 Mainly Beta › Single Sheet › Lipovitellin-phosvitin complex; beta-sheet shell regions › Vitellinogen, beta-sheet shell domain 0.55 39.0 2.81e-01 75.0% 25.3%
2oqbA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 44.0 3.59e-01 89.3% 75.0%
2b5nB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 38.0 2.42e-01 73.2% 96.6%
5hy7B02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 38.0 2.48e-01 76.8% 97.8%
3kljA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.54 44.0 3.96e-01 96.4% 62.7%
2x3nA02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.54 40.0 3.12e-01 83.9% 33.1%
2rghA02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.54 43.0 3.16e-01 91.1% 39.3%
4fflA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.54 45.0 3.02e-01 100.0% 56.0%
3rqwA01 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.53 44.0 3.18e-01 100.0% 49.5%
5f67B00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.53 39.0 3.33e-01 82.1% 87.6%
3lr5A00 3.30.450.300 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Sensor histidine kinase RisS, periplasmic domain 0.53 44.0 3.59e-01 100.0% 67.2%
1u0tA02 2.60.200.30 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › Probable inorganic polyphosphate/atp-NAD kinase; domain 2 0.52 43.0 3.24e-01 91.1% 100.0%
2bolB02 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 43.0 3.45e-01 100.0% 63.3%
1rerA01 2.60.98.10 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1 0.52 40.0 3.32e-01 94.6% 83.3%
3co8A01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.52 44.0 3.31e-01 100.0% 80.4%
2crvA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.52 41.0 3.67e-01 98.2% 77.4%
1hn0A04 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.51 44.0 3.49e-01 100.0% 62.3%
1wi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 40.0 3.27e-01 89.3% 74.8%
4j27A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 42.0 3.75e-01 100.0% 76.4%
6oauA02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.50 40.0 3.33e-01 100.0% 81.1%
ECOD (44)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3962219 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.67 51.0 3.42e-01 83.9% 79.1%
1949141 244.1.1.8 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Trp_halogenase 0.66 50.0 4.32e-01 83.9% 52.9%
4961531 881.4.1.0 a+b three layers › Mog1p/PsbP-like › C-terminal domain in sigma-E factor regulatory protein rseB › C-terminal domain in sigma-E factor regulatory protein rseB 0.66 56.0 4.54e-01 96.4% 57.3%
5037188 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.65 45.0 4.13e-01 73.2% 81.3%
4011458 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 48.0 3.44e-01 82.1% 62.4%
3600467 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.62 47.0 3.80e-01 82.1% 56.4%
3576362 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 52.0 4.40e-01 100.0% 56.0%
4623762 3018.1.1.1 a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS 0.61 50.0 4.23e-01 94.6% 86.0%
3581214 11.1.1.673 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CUT_N 0.60 51.0 4.18e-01 100.0% 50.0%
3787201 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 48.0 4.04e-01 89.3% 100.0%
3246370 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.60 50.0 3.16e-01 94.6% 39.7%
3744837 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.60 46.0 3.54e-01 85.7% 36.2%
5006875 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 50.0 4.19e-01 94.6% 78.6%
4999961 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 51.0 3.98e-01 96.4% 76.4%
3513347 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 45.0 3.85e-01 82.1% 81.1%
4024042 223.2.1.31 a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_2 0.59 49.0 3.51e-01 96.4% 70.3%
4944879 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 46.0 4.02e-01 85.7% 96.5%
4979972 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 42.0 3.19e-01 76.8% 56.3%
5048580 223.2.1.5 a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 0.58 46.0 3.98e-01 87.5% 94.4%
4646590 1164.1.1.0 a+b two layers › Hypothetical virulence protein › Hypothetical virulence protein › Hypothetical virulence protein 0.58 48.0 3.80e-01 96.4% 43.3%
4000362 223.2.1.36 a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_3 0.58 46.0 3.86e-01 89.3% 69.5%
3838528 319.3.1.0 beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ 0.58 48.0 3.85e-01 100.0% 45.2%
5051533 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 41.0 3.36e-01 76.8% 71.8%
3253390 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.57 41.0 2.55e-01 76.8% 98.9%
3249061 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.57 39.0 2.47e-01 73.2% 98.2%
3930311 220.1.1.176 beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7778 0.57 46.0 3.62e-01 89.3% 72.5%
3554960 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.57 40.0 2.55e-01 76.8% 97.3%
4185771 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.57 40.0 2.56e-01 76.8% 98.2%
3386051 319.3.1.1 beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ › AMIN 0.56 47.0 3.95e-01 96.4% 53.0%
2499603 244.1.1.4 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › DAO 0.56 45.0 3.85e-01 91.1% 64.1%
4943079 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 44.0 3.23e-01 89.3% 50.3%
3839745 319.3.1.1 beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ › AMIN 0.55 46.0 3.84e-01 96.4% 53.0%
3890869 220.1.1.2 beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.55 40.0 2.84e-01 78.6% 47.8%
2697431 220.1.1.2 beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.55 40.0 3.32e-01 80.4% 78.7%
3781016 10.4.1.1 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.55 47.0 3.70e-01 100.0% 84.0%
3790530 223.2.1.36 a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_3 0.53 45.0 3.59e-01 96.4% 75.8%
3198976 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.53 45.0 4.15e-01 100.0% 76.0%
3672678 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.53 44.0 3.92e-01 96.4% 80.0%
3206031 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.52 41.0 3.56e-01 94.6% 78.6%
3998850 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.52 41.0 3.35e-01 89.3% 71.8%
3249578 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.51 41.0 3.73e-01 98.2% 63.5%
3742052 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.51 42.0 3.81e-01 100.0% 84.7%
4952272 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 40.0 3.61e-01 100.0% 61.2%
1313595 244.1.1.4 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › DAO 0.50 36.0 3.17e-01 85.7% 47.9%