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MW980063.1__QXV73782.1__X__00095
Bact-VirMW980063.1__QXV73782.1__X__00095
Identity
- Accession:
- MW980063 ↗
- Kingdom:
- phage
Quality
82.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-67
Domain cluster:
rep: SR-VP_0-2_scaffold_141_2072294_prodigal-single.1__X__X__00268__D8-65
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00196.26 best | GerE | 33.9 | 2.70e-08 | 91.5% | 84.2% |
D2
high
residues 79-160
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1pkfA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.69 | 61.0 | 3.91e-01 | 100.0% | 37.5% |
| 1sg6A02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.62 | 55.0 | 4.20e-01 | 100.0% | 53.8% |
| 1c9bA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.59 | 47.0 | 4.39e-01 | 100.0% | 67.9% |
| 1c9bA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.59 | 44.0 | 4.16e-01 | 95.1% | 67.0% |
| 3kbbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.58 | 40.0 | 4.29e-01 | 100.0% | 87.1% |
| 8b70A01 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.58 | 45.0 | 2.92e-01 | 87.8% | 55.5% |
| 2a6hF01 | 1.20.120.1810 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.57 | 49.0 | 3.89e-01 | 100.0% | 44.3% |
| 1s9qA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.57 | 49.0 | 3.66e-01 | 100.0% | 53.6% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.56 | 38.0 | 2.97e-01 | 70.7% | 39.3% |
| 1o2dA02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.55 | 49.0 | 3.84e-01 | 100.0% | 50.3% |
| 2w96A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.55 | 43.0 | 3.98e-01 | 96.3% | 63.7% |
| 2eucA00 | 1.10.8.570 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Hypothetical protein YfmB | 0.55 | 42.0 | 3.87e-01 | 89.0% | 63.6% |
| 3s6jE02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 41.0 | 4.38e-01 | 100.0% | 95.7% |
| 1w2qA01 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.54 | 44.0 | 4.00e-01 | 92.7% | 66.4% |
| 4f92B10 | 1.10.3380.10 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain | 0.53 | 46.0 | 3.84e-01 | 95.1% | 86.0% |
| 3h4cA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.52 | 43.0 | 4.13e-01 | 90.2% | 85.4% |
| 3vw4A01 | 1.10.340.50 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.52 | 41.0 | 3.99e-01 | 89.0% | 77.2% |
| 4ye6A02 | 1.10.10.2420 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.52 | 35.0 | 3.97e-01 | 90.2% | 98.3% |
| 3idpB02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.52 | 40.0 | 3.20e-01 | 84.1% | 90.1% |
| 2j0wA02 | 1.20.120.1320 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartokinase, catalytic domain | 0.52 | 41.0 | 3.93e-01 | 84.1% | 77.4% |
| 3tjmA02 | 1.10.1470.20 | Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › Fatty acid synthase; domain 2 | 0.52 | 46.0 | 4.47e-01 | 98.8% | 91.1% |
| 2wh5A00 | 1.20.80.10 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.52 | 35.0 | 3.45e-01 | 70.7% | 86.7% |
| 5g5gA02 | 1.10.150.120 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain | 0.52 | 45.0 | 4.37e-01 | 100.0% | 87.8% |
| 3h0gA05 | 1.10.132.30 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain | 0.52 | 42.0 | 3.52e-01 | 90.2% | 89.7% |
| 1wynA01 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.51 | 31.0 | 2.94e-01 | 76.8% | 46.3% |
| 3deeA01 | 1.10.150.690 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF2063 | 0.50 | 38.0 | 3.83e-01 | 100.0% | 77.9% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4933950 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.63 | 42.0 | 3.07e-01 | 100.0% | 25.3% |
| 4482017 | 185.1.1.0 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin | 0.62 | 50.0 | 4.54e-01 | 90.2% | 68.4% |
| 3728304 | 604.12.1.24 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DUF6604 | 0.61 | 44.0 | 4.16e-01 | 76.8% | 83.0% |
| 3629800 | 101.26.1.1 ↗ | alpha arrays › HTH › Tex N-terminal domain › Tex N-terminal domain › Tex_N | 0.61 | 42.0 | 4.71e-01 | 96.3% | 98.3% |
| 3937183 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.61 | 46.0 | 3.89e-01 | 82.9% | 92.4% |
| 3971708 | 4198.2.1.3 ↗ | alpha arrays › TerB-like › TTHA1432-like › TTHA1432-like › DUF2780 | 0.60 | 54.0 | 4.90e-01 | 100.0% | 91.8% |
| 4926899 | 101.17.1.0 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins | 0.58 | 52.0 | 4.56e-01 | 100.0% | 88.3% |
| 4975399 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.58 | 48.0 | 4.42e-01 | 91.5% | 73.3% |
| 3333216 | 604.3.1.1 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG | 0.57 | 43.0 | 4.12e-01 | 80.5% | 77.9% |
| 3994910 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.57 | 42.0 | 3.54e-01 | 80.5% | 74.0% |
| 3207652 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 44.0 | 3.60e-01 | 85.4% | 81.3% |
| 3965304 | 5051.1.1.3 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › SSF | 0.56 | 41.0 | 2.61e-01 | 80.5% | 84.0% |
| 4622610 | 101.1.1.431 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CFEM | 0.56 | 44.0 | 4.68e-01 | 95.1% | 100.0% |
| 3712717 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.56 | 40.0 | 3.34e-01 | 76.8% | 52.3% |
| 3771 | 4119.1.1.1 ↗ | alpha bundles › YfmB-like › YfmB-like › YfmB-like › DUF3212 | 0.55 | 42.0 | 3.85e-01 | 89.0% | 63.0% |
| 54731 | 4119.1.1.0 ↗ | alpha bundles › YfmB-like › YfmB-like › YfmB-like | 0.55 | 42.0 | 3.85e-01 | 89.0% | 63.0% |
| 3927986 | 192.15.1.120 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › ASC | 0.54 | 33.0 | 3.16e-01 | 75.6% | 51.0% |
| 3930447 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.53 | 36.0 | 2.97e-01 | 70.7% | 85.6% |
| 4111152 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.52 | 44.0 | 3.49e-01 | 100.0% | 44.6% |
| 3994728 | 7094.1.1.3 ↗ | alpha bundles › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › OPA1_C | 0.52 | 45.0 | 3.84e-01 | 98.8% | 66.4% |
| 4026729 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.52 | 43.0 | 3.60e-01 | 90.2% | 70.7% |
| 3391153 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.51 | 43.0 | 2.99e-01 | 97.6% | 50.3% |
| 4983336 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.51 | 41.0 | 2.94e-01 | 86.6% | 78.2% |
| 3889356 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.51 | 44.0 | 3.23e-01 | 100.0% | 47.3% |
| 3607719 | 633.24.1.0 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain | 0.51 | 42.0 | 4.24e-01 | 97.6% | 94.1% |