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MW980063.1QXV73808.1X__00121

Bact-Vir

MW980063.1__QXV73808.1__X__00121

Identity

Accession:: MW980063 ↗
Kingdom:: phage

Quality

60.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Rhizobium_phage_RHph_N46

TaxID: 2836127

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 10-83

PDB

Domain cluster: rep: MW980063.1__QXV73811.1__X__00124__D10-78

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1yu0A01	2.10.10.30	Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) ›	0.78	49.0	5.86e-01	77.0%	94.1%
1wdjA00	3.90.1570.10	Alpha Beta › Alpha-Beta Complex › tt1808, chain A › tt1808, chain A	0.54	42.0	3.29e-01	89.2%	87.6%
1mg2A00	2.130.10.10	Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase	0.52	39.0	2.54e-01	82.4%	46.3%
3bk5A00	2.50.20.10	Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX	0.51	35.0	2.52e-01	71.6%	32.3%
7szeB01	2.102.10.10	Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain	0.50	34.0	3.11e-01	71.6%	84.1%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1107990	3761.1.1.1 ↗	beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Mtd_N	0.79	49.0	5.88e-01	77.0%	94.0%
4523246	391.1.2.3 ↗	few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › SVWC	0.62	36.0	3.82e-01	71.6%	64.6%
4055607	244.1.1.4 ↗	a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › DAO	0.54	38.0	3.02e-01	74.3%	90.3%
None	—		0.54	38.0	2.39e-01	73.0%	53.1%
4477489	244.1.1.0 ↗	a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C	0.53	37.0	3.03e-01	73.0%	91.7%
3214604	244.1.1.0 ↗	a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C	0.53	37.0	3.02e-01	74.3%	96.8%
5041214	244.1.1.4 ↗	a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › DAO	0.51	35.0	2.90e-01	73.0%	89.3%
3902971	5.1.3.9 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › OLF	0.51	36.0	2.59e-01	77.0%	68.1%
3838220	244.1.1.0 ↗	a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C	0.51	36.0	2.94e-01	73.0%	93.6%
4971206	2003.1.3.1 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO	0.50	34.0	2.20e-01	70.3%	56.3%
3401459	270.1.1.2 ↗	beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C	0.50	35.0	3.17e-01	75.7%	86.4%

D2 medium residues 131-208

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4n21E00	1.10.287.210	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.77	56.0	4.80e-01	84.6%	49.6%
3tbiB02	6.10.140.1670	Special › Helix non-globular › Helix Hairpins ›	0.65	51.0	4.66e-01	84.6%	65.0%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3466486	3562.1.1.11 ↗	alpha bundles › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 › PGG	0.59	45.0	2.91e-01	84.6%	76.1%

D3 medium residues 225-291

PDB

D4 medium residues 292-378

PDB

D5 medium residues 379-470

PDB