←Back to structures

MW980063.1__QXV73960.1__X__00273

Bact-Vir

MW980063.1__QXV73960.1__X__00273

Identity

Accession:
MW980063 ↗
Kingdom:
phage

Quality

84.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Rhizobium_phage_RHph_N46

TaxID: 2836127

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-83
PDB
Domain cluster: rep: MW812339.1__QVW55228.1__pEaSNUABM29_00188__00184__D7-88
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF20137.5 best BubE 48.3 1.00e-12 97.0% 71.3%
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fl2A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.81 44.0 3.50e-01 94.0% 29.0%
7e52A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.77 42.0 3.33e-01 94.0% 28.1%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 33.0 3.57e-01 97.0% 56.9%
2eifA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 43.0 4.53e-01 91.0% 86.4%
7dpyB01 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.58 47.0 4.48e-01 94.0% 81.9%
1krlA00 6.20.50.130 Special › Other non-globular › N-terminal domain of TfIIb › 0.56 31.0 3.72e-01 70.1% 84.1%
1wfqA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 46.0 4.51e-01 94.0% 86.3%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.54 38.0 4.11e-01 79.1% 89.3%
4zgfA00 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.52 41.0 3.39e-01 94.0% 90.1%
2vseA04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 39.0 3.20e-01 88.1% 90.9%
1y9lA00 2.40.128.230 Mainly Beta › Beta Barrel › Lipocalin › Pilot protein MxiM 0.50 38.0 3.42e-01 89.6% 93.6%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4512216 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.82 52.0 5.95e-01 86.6% 88.0%
3387951 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.78 46.0 5.63e-01 79.1% 97.5%
3702075 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.75 45.0 5.11e-01 77.6% 80.0%
3330803 375.1.1.144 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › YABBY_N 0.75 48.0 5.62e-01 80.6% 97.8%
5058894 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.73 47.0 5.46e-01 80.6% 97.8%
3946860 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.71 42.0 4.90e-01 79.1% 86.7%
5080678 4.26.1.0 ↗ beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 0.70 45.0 4.94e-01 80.6% 80.0%
5056544 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 41.0 4.43e-01 71.6% 96.4%
4024274 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.59 38.0 3.31e-01 95.5% 41.0%
5047479 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 37.0 3.16e-01 95.5% 41.8%
3942396 4.1.1.412 ↗ beta barrels › SH3 › SH3 › SH3 › DUF1062 0.54 40.0 3.74e-01 82.1% 78.9%
3983892 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.53 44.0 3.75e-01 94.0% 68.7%
3204805 73.1.1.1 ↗ beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA 0.52 39.0 3.54e-01 79.1% 71.1%
3978190 375.1.1.311 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF1062 0.52 37.0 3.49e-01 79.1% 72.2%
3591459 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.51 39.0 3.66e-01 95.5% 65.9%
5054994 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 33.0 3.73e-01 92.5% 91.7%