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MW980068.1__QXV74423.1__X__00013
Bact-VirMW980068.1__QXV74423.1__X__00013
Identity
- Accession:
- MW980068 ↗
- Kingdom:
- phage
Quality
64.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-75
D2
high
residues 106-252
Domain cluster:
rep: OQ471969.1__WEU68092.1__vBAbaMABMM1_72__00072__D483-655
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18013.7 best | Phage_lysozyme2 | 35.9 | 1.10e-08 | 83.0% | 86.1% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1am7A00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.68 | 57.0 | 5.67e-01 | 89.8% | 98.7% |
| 2dqaA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.67 | 54.0 | 5.82e-01 | 93.2% | 100.0% |
| 1iizA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.67 | 52.0 | 5.70e-01 | 100.0% | 99.2% |
| 1hfxA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.66 | 52.0 | 5.59e-01 | 100.0% | 98.4% |
| 2xqoA00 | 1.10.530.60 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.65 | 59.0 | 5.24e-01 | 100.0% | 76.7% |
| 3w6bB00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.64 | 58.0 | 5.72e-01 | 100.0% | 93.5% |
| 4bndA02 | 3.30.1240.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › Eukaryotic phosphomannomutase, cap domain | 0.60 | 33.0 | 3.97e-01 | 83.7% | 80.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3587750 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.71 | 49.0 | 5.71e-01 | 93.2% | 99.0% |
| 4132757 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.70 | 66.0 | 6.19e-01 | 100.0% | 85.0% |
| 3947473 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.69 | 58.0 | 5.79e-01 | 96.6% | 86.7% |
| 3222819 | 235.1.1.12 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Destabilase | 0.64 | 53.0 | 5.60e-01 | 90.5% | 99.2% |
| 3720940 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.62 | 56.0 | 5.26e-01 | 98.0% | 81.7% |
| 4443068 | 235.1.1.10 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase | 0.58 | 51.0 | 4.46e-01 | 100.0% | 62.2% |
D3
high
residues 367-430
Domain cluster:
representative
D4
high
residues 578-705
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tqgA00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.63 | 48.0 | 5.25e-01 | 95.3% | 99.0% |
| 1j1jA01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.59 | 38.0 | 3.83e-01 | 80.5% | 62.9% |
| 4h63H01 | 1.20.58.1710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 28.0 | 3.75e-01 | 97.7% | 84.7% |
| 1ezvC00 | 1.20.810.10 | Mainly Alpha › Up-down Bundle › Cytochrome Bc1 Complex; Chain C › Cytochrome Bc1 Complex; Chain C | 0.57 | 51.0 | 3.61e-01 | 97.7% | 50.4% |
| 3jrtA00 | 1.20.120.1060 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.57 | 52.0 | 4.74e-01 | 97.7% | 94.0% |
| 2etsA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.57 | 47.0 | 4.97e-01 | 95.3% | 100.0% |
| 1vctA01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.56 | 34.0 | 3.66e-01 | 100.0% | 70.6% |
| 2p61A00 | 1.20.120.490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hypothetical protein TM1646-like domain | 0.54 | 43.0 | 4.52e-01 | 91.4% | 93.9% |
| 6xz3A01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.54 | 46.0 | 4.82e-01 | 96.1% | 100.0% |
| 4od4A01 | 1.10.357.140 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › UbiA prenyltransferase | 0.54 | 46.0 | 4.34e-01 | 93.0% | 76.3% |
| 3kdqA00 | 6.10.320.10 | Special › Helix non-globular › Ferritin › | 0.53 | 33.0 | 3.15e-01 | 98.4% | 52.6% |
| 6gy8A01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.53 | 47.0 | 3.49e-01 | 97.7% | 78.9% |
| 3ihuA02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.52 | 43.0 | 4.28e-01 | 92.2% | 94.2% |
| 1e1dA02 | 1.20.1270.20 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.52 | 30.0 | 3.65e-01 | 79.7% | 88.1% |
| 1yozA00 | 1.10.3200.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like | 0.52 | 31.0 | 3.30e-01 | 99.2% | 66.4% |
| 1fewA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 38.0 | 3.45e-01 | 76.6% | 74.0% |
| 1oe8A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 30.0 | 3.09e-01 | 75.0% | 56.5% |
| 2uyyA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.52 | 36.0 | 3.75e-01 | 100.0% | 76.4% |
| 2e9xA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 30.0 | 3.10e-01 | 98.4% | 57.8% |
| 7p3rA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.51 | 44.0 | 3.30e-01 | 93.8% | 86.5% |
| 3onjA00 | 1.20.58.400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins | 0.51 | 37.0 | 4.21e-01 | 76.6% | 97.9% |
| 5c4yA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 41.0 | 4.05e-01 | 88.3% | 81.6% |
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.50 | 35.0 | 3.69e-01 | 82.8% | 79.8% |
| 1i36A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.50 | 32.0 | 3.58e-01 | 98.4% | 82.8% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.50 | 36.0 | 4.06e-01 | 76.6% | 94.1% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3465090 | 611.7.1.0 ↗ | alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain | 0.67 | 36.0 | 3.68e-01 | 97.7% | 50.8% |
| 3669101 | 611.7.1.15 ↗ | alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Rx_N | 0.67 | 33.0 | 3.19e-01 | 96.9% | 41.4% |
| 4451459 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.61 | 36.0 | 3.66e-01 | 93.8% | 60.0% |
| 3395295 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 38.0 | 2.90e-01 | 100.0% | 29.6% |
| 3249720 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.57 | 50.0 | 5.05e-01 | 97.7% | 94.6% |
| 3613134 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.56 | 45.0 | 4.34e-01 | 83.6% | 92.4% |
| 3187372 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.56 | 52.0 | 4.59e-01 | 100.0% | 81.7% |
| 2703780 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.56 | 50.0 | 4.52e-01 | 97.7% | 99.4% |
| 3459613 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.56 | 50.0 | 4.60e-01 | 97.7% | 92.7% |
| 4154382 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.54 | 48.0 | 4.35e-01 | 96.9% | 84.4% |
| 3221752 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.53 | 47.0 | 4.29e-01 | 97.7% | 77.6% |
| 4026597 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.53 | 47.0 | 4.01e-01 | 96.9% | 87.3% |
| 3215054 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.53 | 46.0 | 4.57e-01 | 96.1% | 100.0% |
| 3420000 | 601.19.1.27 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › DUF7795 | 0.53 | 47.0 | 4.12e-01 | 96.9% | 89.2% |
| 3214333 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.52 | 39.0 | 4.17e-01 | 89.8% | 87.0% |
| 3999930 | 603.1.1.105 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF31021 | 0.52 | 38.0 | 4.05e-01 | 75.0% | 94.5% |
| 4555056 | 141.1.1.6 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › HEPPP_synt_1 | 0.52 | 41.0 | 3.53e-01 | 92.2% | 52.4% |
| 5026339 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.51 | 45.0 | 4.39e-01 | 96.1% | 98.6% |
| 3499836 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.51 | 37.0 | 3.47e-01 | 75.8% | 77.4% |
| 5046515 | 5069.1.1.44 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › CopD | 0.50 | 44.0 | 4.12e-01 | 96.1% | 96.8% |
| 3475253 | 189.1.1.2 ↗ | alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RhoGAP | 0.50 | 38.0 | 3.33e-01 | 78.9% | 71.5% |
| 3934654 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.50 | 37.0 | 3.29e-01 | 75.8% | 61.1% |
| 4396660 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.50 | 32.0 | 2.67e-01 | 96.1% | 36.1% |
| 3282593 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.50 | 37.0 | 3.10e-01 | 78.9% | 87.9% |