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MW980069.1__QXV74545.1__X__00052
Bact-VirMW980069.1__QXV74545.1__X__00052
Identity
- Accession:
- MW980069 ↗
- Kingdom:
- phage
Quality
88.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-115
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vk1A01 | 3.90.1530.10 | Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain | 0.84 | 58.0 | 6.00e-01 | 70.0% | 79.4% |
| 1vz0A01 | 3.90.1530.30 | Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › | 0.70 | 39.0 | 4.96e-01 | 97.3% | 95.2% |
| 1j8uA00 | 1.10.800.10 | Mainly Alpha › Orthogonal Bundle › Phenylalanine Hydroxylase › Aromatic amino acid hydroxylase | 0.51 | 39.0 | 2.89e-01 | 83.6% | 67.4% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5031965 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.85 | 57.0 | 4.74e-01 | 72.7% | 42.9% |
| 4964030 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.85 | 60.0 | 5.84e-01 | 80.9% | 66.7% |
| 4116056 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.85 | 58.0 | 6.56e-01 | 70.0% | 94.1% |
| 4931651 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.84 | 58.0 | 6.29e-01 | 79.1% | 82.1% |
| 4934171 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.81 | 56.0 | 5.08e-01 | 72.7% | 55.0% |
| 3772471 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.81 | 57.0 | 6.23e-01 | 71.8% | 92.2% |
| 2710114 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.80 | 59.0 | 6.36e-01 | 76.4% | 98.9% |
| 2061501 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.79 | 54.0 | 5.68e-01 | 70.0% | 81.8% |
| 3602844 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.79 | 58.0 | 5.67e-01 | 81.8% | 70.0% |
| 4974679 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.78 | 58.0 | 5.95e-01 | 76.4% | 81.7% |
| 3945776 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.77 | 54.0 | 5.83e-01 | 75.5% | 84.2% |
| 2841795 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.76 | 52.0 | 5.76e-01 | 71.8% | 86.7% |
| 5083282 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.75 | 55.0 | 5.80e-01 | 75.5% | 85.0% |
| 5069965 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.74 | 57.0 | 5.42e-01 | 80.9% | 69.6% |
| 3587492 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.74 | 57.0 | 5.92e-01 | 80.0% | 97.0% |
| 4370861 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.72 | 51.0 | 5.19e-01 | 73.6% | 82.7% |
| 4931684 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.70 | 51.0 | 4.35e-01 | 76.4% | 78.3% |
| 4930140 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.67 | 49.0 | 3.99e-01 | 75.5% | 79.8% |
| 1409395 | 876.1.1.3 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › PFIN | 0.62 | 53.0 | 4.39e-01 | 90.9% | 79.8% |
| 3283211 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.59 | 46.0 | 4.33e-01 | 84.5% | 90.0% |
D2
high
residues 127-228
Domain cluster:
rep: MF988720.1__ATN93383.1__X__00011__D118-147_175-281
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cpqA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.65 | 35.0 | 4.21e-01 | 83.3% | 81.2% |
| 2yqrA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.58 | 42.0 | 4.20e-01 | 90.2% | 74.8% |
| 4c8yA01 | 3.30.70.1890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 38.0 | 3.78e-01 | 97.1% | 71.4% |
| 4g6vB00 | 3.30.70.2920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 37.0 | 3.79e-01 | 95.1% | 73.8% |
| 1k8wA01 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.53 | 46.0 | 3.55e-01 | 99.0% | 62.7% |
| 1k8kD01 | 3.30.1460.20 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.51 | 41.0 | 3.62e-01 | 98.0% | 58.3% |
| 1av5A00 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.51 | 36.0 | 3.50e-01 | 89.2% | 65.5% |
| 2wp4B00 | 3.90.1170.40 | Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Molybdopterin biosynthesis MoaE subunit | 0.51 | 41.0 | 3.80e-01 | 98.0% | 68.9% |
| 2jgbA01 | 3.30.760.10 | Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e | 0.50 | 43.0 | 3.61e-01 | 98.0% | 55.5% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3964748 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.77 | 62.0 | 6.16e-01 | 100.0% | 81.9% |
| 3716549 | 304.34.1.0 ↗ | a+b two layers › Alpha-beta plaits › Nucleoside diphosphate kinases › Nucleoside diphosphate kinases | 0.58 | 38.0 | 3.83e-01 | 95.1% | 67.0% |
| 3393710 | 304.9.1.95 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4780 | 0.57 | 41.0 | 4.28e-01 | 96.1% | 81.1% |
| 5020494 | 304.18.1.0 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS | 0.57 | 40.0 | 4.23e-01 | 94.1% | 83.3% |
| 3181971 | 304.4.1.11 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › EthD | 0.57 | 49.0 | 4.41e-01 | 97.1% | 78.6% |
| 4890855 | 304.34.1.0 ↗ | a+b two layers › Alpha-beta plaits › Nucleoside diphosphate kinases › Nucleoside diphosphate kinases | 0.56 | 38.0 | 3.82e-01 | 96.1% | 67.0% |
| 3483013 | 304.24.1.1 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C | 0.54 | 38.0 | 3.60e-01 | 96.1% | 60.8% |
| 3177324 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.54 | 47.0 | 3.58e-01 | 99.0% | 64.5% |
| 3533575 | 327.11.2.24 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_12 | 0.54 | 37.0 | 3.74e-01 | 94.1% | 69.5% |
| 4928893 | 304.124.1.0 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like | 0.53 | 44.0 | 3.94e-01 | 91.2% | 64.1% |
| 1175282 | 304.10.1.1 ↗ | a+b two layers › Alpha-beta plaits › RuBisCO, large subunit, small (N-terminal) domain › RuBisCO, large subunit, small (N-terminal) domain › RuBisCO_large_N | 0.53 | 40.0 | 3.91e-01 | 95.1% | 73.9% |
| 987926 | 304.15.1.5 ↗ | a+b two layers › Alpha-beta plaits › Viral DNA-binding domain › Viral DNA-binding domain › CDI_Immunity_Comp | 0.52 | 37.0 | 3.79e-01 | 95.1% | 76.0% |
| 3701460 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 43.0 | 4.02e-01 | 96.1% | 72.3% |
| 3478552 | 304.4.1.5 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dyp_perox_N | 0.52 | 44.0 | 4.03e-01 | 95.1% | 91.4% |
| 3490902 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.52 | 44.0 | 3.86e-01 | 96.1% | 80.6% |
| 3834758 | 4956.1.1.0 ↗ | a+b two layers › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.51 | 40.0 | 3.99e-01 | 98.0% | 79.1% |
| 3276405 | 246.3.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like | 0.51 | 41.0 | 3.06e-01 | 88.2% | 84.4% |
| 303762 | 304.4.1.5 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dyp_perox_N | 0.51 | 44.0 | 4.01e-01 | 96.1% | 89.8% |
| 3867900 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.51 | 42.0 | 3.44e-01 | 95.1% | 48.4% |
| 5175 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.50 | 43.0 | 4.31e-01 | 94.1% | 97.1% |
| 3016421 | 304.4.1.5 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Dyp_perox_N | 0.50 | 43.0 | 3.98e-01 | 96.1% | 92.5% |