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MZ005671.1__QXO13677.1__SEA_DUMPTRUCK_21__00021

Bact-Vir

MZ005671.1__QXO13677.1__SEA_DUMPTRUCK_21__00021

Identity

Accession:
MZ005671 ↗
Kingdom:
phage

Quality

70.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lambovirus› Gordonia_phage_DumpTruck

TaxID: 2835954

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 58-132
PDB
Domain cluster: rep: OP172876.1__UVT31702.1__SEA_PATOS_4__00004__D2-56
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3anwA02 3.40.5.50 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › 0.68 44.0 4.85e-01 96.0% 86.2%
1jb0D00 3.30.1470.10 Alpha Beta › 2-Layer Sandwich › Photosystem 1 Reaction Centre Subunit Ii; Chain: D; › Photosystem I PsaD, reaction center subunit II 0.52 40.0 3.37e-01 100.0% 47.1%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5037502 4076.3.1.5 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › Gins51_C 0.68 45.0 4.97e-01 96.0% 92.6%
4978275 4076.3.1.5 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › Gins51_C 0.67 46.0 5.11e-01 97.3% 96.4%
4941835 4076.3.1.5 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › Gins51_C 0.67 42.0 4.51e-01 92.0% 78.3%
5042275 4076.3.1.0 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.65 41.0 4.55e-01 93.3% 87.3%
1890284 4076.3.1.5 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › Gins51_C 0.64 42.0 4.62e-01 97.3% 87.9%
4411335 206.1.3.5 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › DNA_ligase_aden 0.51 37.0 2.50e-01 78.7% 22.3%
3280205 304.28.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.51 42.0 3.96e-01 98.7% 94.7%