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MZ028627.1__QWS68275.1__SEA_VANLEE_159__00158
Bact-VirMZ028627.1__QWS68275.1__SEA_VANLEE_159__00158
Identity
- Accession:
- MZ028627 ↗
- Kingdom:
- phage
Quality
84.0
mean pLDDT
Taxonomy
TaxID: 2845816
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-67
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4boeA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.65 | 51.0 | 3.92e-01 | 86.4% | 49.4% |
| 8aa0E01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.65 | 56.0 | 3.68e-01 | 100.0% | 40.5% |
| 3klkA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.64 | 49.0 | 3.82e-01 | 81.8% | 93.0% |
| 1qwdB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.64 | 50.0 | 3.72e-01 | 84.8% | 42.8% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.61 | 38.0 | 4.45e-01 | 71.2% | 91.3% |
| 5azpA02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.61 | 45.0 | 4.27e-01 | 80.3% | 87.7% |
| 4qqsB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.61 | 52.0 | 3.42e-01 | 100.0% | 55.3% |
| 6x6aA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.60 | 49.0 | 3.27e-01 | 92.4% | 53.0% |
| 3aqoA02 | 3.30.1360.200 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.60 | 41.0 | 3.19e-01 | 71.2% | 52.5% |
| 2w9jA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.60 | 36.0 | 3.56e-01 | 78.8% | 56.3% |
| 1qhlA00 | 3.40.1140.10 | Alpha Beta › 3-Layer(aba) Sandwich › N-terminal domain of mukB › | 0.59 | 51.0 | 3.59e-01 | 95.5% | 72.4% |
| 1d3bB00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 44.0 | 4.16e-01 | 80.3% | 65.4% |
| 4x00A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.59 | 52.0 | 3.45e-01 | 100.0% | 67.8% |
| 4e6fA00 | 3.30.530.80 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › | 0.58 | 48.0 | 3.61e-01 | 92.4% | 36.8% |
| 7dpyB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.58 | 46.0 | 4.34e-01 | 89.4% | 88.0% |
| 2cwaA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 43.0 | 3.71e-01 | 81.8% | 68.8% |
| 4c92G00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 40.0 | 3.90e-01 | 80.3% | 65.3% |
| 6n8pA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 48.0 | 3.08e-01 | 100.0% | 26.1% |
| 8adlB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 50.0 | 3.19e-01 | 98.5% | 42.1% |
| 1st8A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 45.0 | 2.99e-01 | 93.9% | 58.3% |
| 4rncA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 49.0 | 3.26e-01 | 100.0% | 68.3% |
| 5cfvA01 | 3.30.700.10 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin | 0.56 | 47.0 | 4.04e-01 | 93.9% | 57.9% |
| 1aqbA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 48.0 | 3.61e-01 | 100.0% | 88.0% |
| 4ns4A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 48.0 | 3.25e-01 | 100.0% | 62.0% |
| 1xkiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 38.0 | 3.17e-01 | 100.0% | 37.5% |
| 4ffgA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 44.0 | 2.96e-01 | 97.0% | 39.6% |
| 3q90B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 46.0 | 3.80e-01 | 98.5% | 90.0% |
| 1wuoA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.55 | 43.0 | 3.09e-01 | 89.4% | 83.6% |
| 2yh9B00 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.54 | 37.0 | 3.75e-01 | 78.8% | 69.1% |
| 4gn2A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.54 | 43.0 | 3.07e-01 | 93.9% | 87.9% |
| 2nlkA02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.54 | 44.0 | 2.96e-01 | 90.9% | 31.5% |
| 3pijA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 45.0 | 2.86e-01 | 98.5% | 32.9% |
| 2bolB02 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 45.0 | 3.68e-01 | 97.0% | 63.3% |
| 2greA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.52 | 44.0 | 3.10e-01 | 98.5% | 70.3% |
| 3f2bA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 39.0 | 3.52e-01 | 84.8% | 71.9% |
| 3h51A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 42.0 | 3.39e-01 | 98.5% | 93.7% |
| 1gesA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.50 | 39.0 | 3.42e-01 | 90.9% | 67.3% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3201714 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.74 | 51.0 | 5.56e-01 | 78.8% | 87.3% |
| 3804708 | 5.1.3.65 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 | 0.68 | 50.0 | 3.19e-01 | 86.4% | 16.7% |
| 3375457 | 4.1.1.159 ↗ | beta barrels › SH3 › SH3 › SH3 › Saf4_Yju2 | 0.63 | 53.0 | 5.16e-01 | 93.9% | 98.7% |
| 3965664 | 217.1.1.2 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_4 | 0.63 | 48.0 | 3.12e-01 | 80.3% | 42.9% |
| 3740970 | 5.1.4.249 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_pof12 | 0.63 | 51.0 | 3.14e-01 | 86.4% | 26.3% |
| 3998279 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.61 | 52.0 | 4.35e-01 | 93.9% | 60.9% |
| 3476540 | 4099.1.1.2 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spindle_Spc25 | 0.60 | 51.0 | 4.16e-01 | 100.0% | 50.8% |
| 4871016 | 274.1.1.2 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › Pilin,N_methyl | 0.60 | 48.0 | 3.73e-01 | 95.5% | 40.6% |
| 3187112 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.59 | 44.0 | 3.29e-01 | 80.3% | 54.1% |
| 3445272 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.58 | 47.0 | 2.93e-01 | 87.9% | 27.3% |
| 3879830 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.58 | 45.0 | 3.53e-01 | 86.4% | 62.1% |
| 3501270 | 2004.1.1.114 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MukB,SbcC_Walker_B | 0.58 | 44.0 | 2.69e-01 | 83.3% | 19.8% |
| 4030473 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 47.0 | 2.97e-01 | 95.5% | 29.1% |
| 3681671 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.57 | 48.0 | 3.77e-01 | 98.5% | 93.3% |
| 3581093 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.55 | 40.0 | 3.84e-01 | 78.8% | 78.8% |
| 4870077 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.54 | 46.0 | 3.76e-01 | 100.0% | 94.9% |
| 3206195 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.54 | 42.0 | 2.86e-01 | 89.4% | 38.9% |
| 4014614 | 223.1.1.24 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_8 | 0.53 | 42.0 | 3.31e-01 | 89.4% | 72.0% |
| 3705782 | 4357.1.1.8 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › XPB_C | 0.53 | 46.0 | 4.01e-01 | 100.0% | 69.5% |
| 3632113 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.52 | 40.0 | 3.50e-01 | 89.4% | 75.7% |
| 3594234 | 216.1.1.1 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UQ_con | 0.52 | 42.0 | 3.39e-01 | 100.0% | 53.7% |
| 4016434 | 7525.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 | 0.52 | 43.0 | 2.71e-01 | 93.9% | 90.3% |
| 3732011 | 7579.1.1.8 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.52 | 43.0 | 2.66e-01 | 100.0% | 93.9% |
| 3996829 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.51 | 40.0 | 3.46e-01 | 90.9% | 91.3% |
| 3494266 | 331.4.1.5 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › KA1_BRSK | 0.50 | 42.0 | 3.59e-01 | 100.0% | 71.7% |