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MZ042490.1__QXN67221.1__X__00001
Bact-VirMZ042490.1__QXN67221.1__X__00001
Identity
- Accession:
- MZ042490 ↗
- Kingdom:
- phage
Quality
87.4
mean pLDDT
Taxonomy
TaxID: 2834249
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-36
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2aeuA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.71 | 57.0 | 3.48e-01 | 100.0% | 16.6% |
| 3vpbA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.69 | 49.0 | 3.73e-01 | 100.0% | 29.7% |
| 1rkuA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.66 | 48.0 | 3.53e-01 | 100.0% | 27.0% |
| 5kc8A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 51.0 | 3.34e-01 | 100.0% | 19.8% |
| 4jgiB02 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.65 | 54.0 | 3.70e-01 | 100.0% | 26.2% |
| 2hxrB00 | 3.40.190.290 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › | 0.65 | 47.0 | 2.91e-01 | 80.6% | 12.4% |
| 3ffrA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.63 | 49.0 | 2.98e-01 | 100.0% | 14.2% |
| 5oesA04 | 3.40.50.1760 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glutathione synthase, substrate-binding domain superfamily, eukaryotic | 0.62 | 46.0 | 3.34e-01 | 100.0% | 27.4% |
| 5i47A01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 47.0 | 3.54e-01 | 100.0% | 29.4% |
| 1t0iA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.60 | 42.0 | 2.85e-01 | 100.0% | 19.5% |
| 2jxpA01 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.60 | 45.0 | 3.11e-01 | 100.0% | 22.0% |
| 4myrC00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 42.0 | 3.04e-01 | 100.0% | 26.2% |
| 3mwbA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.57 | 45.0 | 3.36e-01 | 100.0% | 31.2% |
| 1wu7A03 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.55 | 46.0 | 3.41e-01 | 100.0% | 45.4% |
| 4emyA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.53 | 41.0 | 2.47e-01 | 90.3% | 22.3% |
| 1f20A01 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.50 | 41.0 | 2.66e-01 | 96.8% | 34.4% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3269087 | 2008.1.1.31 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › VRR_NUC | 0.78 | 62.0 | 3.75e-01 | 100.0% | 15.0% |
| 3507985 | 7550.1.1.1 ↗ | a/b three-layered sandwiches › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › TP_methylase | 0.70 | 53.0 | 3.66e-01 | 100.0% | 94.1% |
| 5065162 | 2003.1.10.23 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › LysX_preATP_grasp | 0.70 | 50.0 | 3.97e-01 | 100.0% | 35.3% |
| 3878424 | 2007.1.6.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › THF_DHG_CYH | 0.69 | 51.0 | 3.49e-01 | 100.0% | 22.1% |
| 5042849 | 2003.1.10.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain | 0.68 | 50.0 | 3.85e-01 | 100.0% | 33.3% |
| 4979236 | 2003.1.10.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain | 0.67 | 50.0 | 3.73e-01 | 100.0% | 32.0% |
| 4947429 | 2003.1.10.37 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › RimK | 0.67 | 50.0 | 3.87e-01 | 100.0% | 35.6% |
| 4984035 | 2003.1.10.23 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › LysX_preATP_grasp | 0.66 | 47.0 | 3.71e-01 | 100.0% | 33.3% |
| 3505323 | 2003.1.10.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › Synapsin | 0.63 | 46.0 | 3.34e-01 | 90.3% | 29.0% |
| 1789278 | 2003.1.10.23 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › LysX_preATP_grasp | 0.62 | 47.0 | 3.70e-01 | 100.0% | 34.5% |
| 4012207 | 129.1.1.0 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.61 | 46.0 | 3.00e-01 | 100.0% | 16.8% |
| 3827631 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.60 | 40.0 | 2.95e-01 | 100.0% | 23.6% |
| 4996061 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.59 | 47.0 | 3.54e-01 | 100.0% | 46.8% |
| 4679724 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.58 | 45.0 | 3.41e-01 | 100.0% | 57.9% |
| 4982300 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.57 | 47.0 | 3.55e-01 | 100.0% | 48.9% |
| 3689568 | 7568.1.1.2 ↗ | a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain › PTCB-BRCT | 0.56 | 40.0 | 3.06e-01 | 100.0% | 30.0% |
| 4117853 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.56 | 46.0 | 3.92e-01 | 100.0% | 75.0% |
| None | — | 0.54 | 38.0 | 2.47e-01 | 100.0% | 13.2% | |
| 4118717 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.53 | 41.0 | 3.51e-01 | 100.0% | 93.3% |
| 4051618 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.52 | 45.0 | 3.78e-01 | 100.0% | 81.7% |
| 169716 | 2007.1.6.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › Shikimate_dh_N | 0.50 | 34.0 | 2.75e-01 | 100.0% | 57.4% |
| 4941210 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.50 | 37.0 | 2.94e-01 | 100.0% | 33.7% |