Back to structures

MZ043613.1__QVW53819.1__TaPaz_38__00038

Bact-Vir

MZ043613.1__QVW53819.1__TaPaz_38__00038

Identity

Accession:
MZ043613 ↗
Kingdom:
phage

Quality

82.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-86
PDB
Domain cluster: representative
D2 medium residues 87-109_132-181
PDB
Domain cluster: representative
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yg2A02 6.10.140.190 Special › Helix non-globular › Helix Hairpins › 0.86 67.0 6.18e-01 82.2% 74.4%
2v0xA01 1.10.287.3160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.85 79.0 5.89e-01 100.0% 45.8%
2rd0B00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.85 77.0 6.14e-01 100.0% 63.3%
2ic6A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.83 61.0 6.19e-01 76.7% 100.0%
1z0pA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.82 60.0 6.07e-01 76.7% 82.2%
3t98B00 6.10.140.1350 Special › Helix non-globular › Helix Hairpins › 0.80 73.0 6.91e-01 100.0% 93.0%
3fppA03 6.10.140.1990 Special › Helix non-globular › Helix Hairpins › 0.80 68.0 6.37e-01 93.2% 84.1%
2gtsA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.79 63.0 6.23e-01 86.3% 84.4%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.79 64.0 6.24e-01 87.7% 83.5%
3r84B00 6.10.280.160 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 0.78 70.0 6.76e-01 98.6% 88.7%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.78 62.0 6.22e-01 86.3% 86.7%
4lwsA00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.78 68.0 6.20e-01 100.0% 85.0%
4aflA00 6.10.140.1740 Special › Helix non-globular › Helix Hairpins › 0.78 69.0 6.19e-01 98.6% 73.5%
6r1nA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.77 62.0 5.46e-01 84.9% 62.1%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.77 66.0 5.69e-01 97.3% 60.7%
1ydxA02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.77 66.0 6.17e-01 94.5% 81.1%
4dciA00 6.10.140.1110 Special › Helix non-globular › Helix Hairpins › 0.77 63.0 4.99e-01 89.0% 53.7%
6tkvA01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.77 59.0 6.15e-01 82.2% 91.2%
1t7sA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.77 66.0 5.30e-01 90.4% 62.8%
3favD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.76 62.0 6.07e-01 87.7% 87.2%
2hh7A00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.75 58.0 5.51e-01 82.2% 80.0%
2dw4A03 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.75 62.0 5.65e-01 100.0% 67.3%
3r84A00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.75 66.0 6.41e-01 98.6% 86.4%
6h9xA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.73 59.0 5.28e-01 87.7% 70.6%
4dylA02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.73 63.0 5.85e-01 98.6% 76.6%
2fb5A01 1.10.287.770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like 0.72 56.0 5.70e-01 84.9% 84.7%
2ke4A00 6.10.140.470 Special › Helix non-globular › Helix Hairpins › 0.72 65.0 5.88e-01 100.0% 75.5%
3ehfB01 6.10.250.2870 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.72 56.0 4.91e-01 82.2% 78.8%
2xubA05 6.10.140.1450 Special › Helix non-globular › Helix Hairpins › 0.66 58.0 5.34e-01 97.3% 88.5%
5dn6J00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.66 49.0 4.96e-01 80.8% 87.8%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2572867 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.89 66.0 5.59e-01 100.0% 50.5%
3176480 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.86 76.0 7.10e-01 100.0% 78.7%
5026881 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.84 70.0 6.94e-01 91.8% 86.7%
4619538 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.81 70.0 5.93e-01 93.2% 59.1%
3839497 150.5.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.79 66.0 6.27e-01 100.0% 77.6%
4960061 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.78 65.0 5.81e-01 90.4% 66.0%
3167271 192.8.1.385 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Med11 0.77 67.0 6.52e-01 94.5% 87.5%
4275409 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.76 64.0 5.60e-01 93.2% 61.8%
2482296 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.75 59.0 5.14e-01 84.9% 65.5%