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MZ043613.1__QVW53935.1__TaPaz_154__00154

Bact-Vir

MZ043613.1__QVW53935.1__TaPaz_154__00154

Identity

Accession:
MZ043613 ↗
Kingdom:
phage

Quality

88.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-59
PDB
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4llgM00 3.10.20.510 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor 0.80 61.0 6.52e-01 84.5% 96.0%
4njcA00 3.10.20.730 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like 0.76 68.0 6.73e-01 98.3% 96.7%
3nrnA02 3.90.660.50 Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › 0.76 57.0 4.07e-01 82.8% 61.9%
3qvnA02 3.55.40.20 Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain 0.76 53.0 4.19e-01 87.9% 36.8%
1vwxS02 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.75 68.0 6.21e-01 100.0% 94.7%
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.73 64.0 5.92e-01 100.0% 96.1%
2qsdA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.72 54.0 5.17e-01 81.0% 80.6%
3mfiA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.70 57.0 4.49e-01 89.7% 53.8%
3fgtA01 2.10.70.60 Mainly Beta › Ribbon › Complement Module; domain 1 › Phospholipase B-like, domain 1 0.69 41.0 4.26e-01 89.7% 61.8%
3e0jB00 3.90.1030.20 Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 0.68 55.0 4.16e-01 100.0% 37.1%
2raqA01 3.30.70.1340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MTH889-like domain 0.67 55.0 4.85e-01 91.4% 95.3%
2nmlA00 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.65 51.0 4.32e-01 87.9% 74.0%
1vioA03 3.30.70.1560 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Alpha-L RNA-binding motif 0.65 52.0 4.72e-01 91.4% 95.1%
2gmlA02 3.30.70.1560 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Alpha-L RNA-binding motif 0.64 49.0 4.60e-01 84.5% 98.6%
2jdjA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 55.0 4.60e-01 98.3% 98.1%
3hvnA01 3.90.840.10 Alpha Beta › Alpha-Beta Complex › HIV-1 Reverse Transcriptase; Chain A, domain 3 › Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain 0.63 48.0 3.60e-01 89.7% 40.7%
1blwA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 46.0 3.93e-01 91.4% 47.1%
1gsoA04 3.90.600.10 Alpha Beta › Alpha-Beta Complex › Glycinamide Ribonucleotide Synthetase; Chain A, domain 4 › Phosphoribosylglycinamide synthetase, C-terminal domain 0.62 45.0 3.99e-01 81.0% 95.7%
2nytD00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.62 48.0 3.44e-01 86.2% 53.6%
2dkmA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 44.0 3.73e-01 91.4% 44.2%
4u7cB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.61 45.0 3.87e-01 86.2% 59.6%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.61 47.0 4.16e-01 87.9% 57.6%
1cfbA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 47.0 3.93e-01 87.9% 47.2%
5utkA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 42.0 3.78e-01 87.9% 50.0%
2wq4A01 2.60.120.760 Mainly Beta › Sandwich › Jelly Rolls › 0.60 48.0 3.79e-01 91.4% 69.0%
6kryA01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.60 46.0 3.56e-01 86.2% 71.0%
2jvfA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.59 46.0 4.00e-01 87.9% 56.4%
1wfoA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 45.0 3.78e-01 86.2% 47.1%
2ibgA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 43.0 3.72e-01 89.7% 47.1%
7y8sA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 45.0 3.91e-01 86.2% 54.7%
1b1zA02 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.59 45.0 3.55e-01 86.2% 71.3%
2h41A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 44.0 3.84e-01 91.4% 51.6%
3v6oA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 44.0 3.90e-01 89.7% 55.2%
1xvsA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.58 45.0 3.61e-01 87.9% 49.6%
3eipA00 3.10.50.20 Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein 0.57 49.0 4.39e-01 100.0% 98.8%
3up6A02 2.60.40.3380 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 44.0 3.35e-01 89.7% 48.7%
2a74A05 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.56 44.0 3.68e-01 87.9% 49.5%
4nx9A02 2.60.40.4390 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 44.0 3.54e-01 87.9% 94.2%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.56 42.0 3.19e-01 87.9% 32.3%
2mraA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.56 42.0 3.54e-01 87.9% 53.8%
4aw7A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.54 38.0 3.16e-01 87.9% 37.3%
6x3aA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 41.0 3.54e-01 87.9% 57.7%
1mzkA00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.54 41.0 3.36e-01 87.9% 98.4%
2je8A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 41.0 3.39e-01 84.5% 59.1%
4wiwA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.53 38.0 3.70e-01 81.0% 100.0%
4ll1C02 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 39.0 3.08e-01 87.9% 42.9%
3wnoA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 40.0 3.38e-01 86.2% 54.0%
1e4eB01 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.51 36.0 2.78e-01 77.6% 73.7%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4995671 3115.1.1.12 a+b two layers › GP2-like › RplX-like › RplX-like › PF30567 0.86 67.0 7.12e-01 87.9% 96.0%
4004704 3115.6.1.2 a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 0.85 63.0 6.95e-01 84.5% 100.0%
5015713 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.85 65.0 6.45e-01 81.0% 98.3%
3969006 3115.6.1.2 a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 0.84 62.0 6.83e-01 84.5% 100.0%
4939739 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.83 65.0 6.48e-01 84.5% 98.3%
5012895 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.83 63.0 6.50e-01 82.8% 100.0%
4160542 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.82 63.0 6.33e-01 82.8% 98.3%
4967222 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.81 66.0 6.60e-01 87.9% 98.3%
4951473 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.81 65.0 6.40e-01 87.9% 95.2%
3975705 3115.6.1.0 a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon 0.81 60.0 6.37e-01 87.9% 92.0%
5014007 3115.2.1.0 a+b two layers › GP2-like › GP2 › GP2 0.81 65.0 6.68e-01 91.4% 90.9%
4463006 3115.2.1.0 a+b two layers › GP2-like › GP2 › GP2 0.80 57.0 6.36e-01 79.3% 97.8%
3287357 3115.3.1.0 a+b two layers › GP2-like › P56 › P56 0.78 63.0 6.27e-01 87.9% 96.6%
5074648 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.75 67.0 6.18e-01 100.0% 96.0%
5012386 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.73 57.0 5.51e-01 84.5% 98.5%
2831852 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.72 64.0 5.33e-01 100.0% 71.3%
5067865 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.72 64.0 6.04e-01 100.0% 97.1%
3517068 3115.1.1.6 a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494 0.72 64.0 6.18e-01 100.0% 98.5%
4962335 3115.5.1.1 a+b two layers › GP2-like › phenylacetate-CoA oxygenase subunit PaaB › phenylacetate-CoA oxygenase subunit PaaB › PaaB 0.72 57.0 5.52e-01 86.2% 81.5%
3396683 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.71 54.0 4.95e-01 84.5% 65.8%
4969863 3115.1.1.1 a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.71 63.0 5.78e-01 100.0% 97.3%
4009311 4187.2.1.0 a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 0.71 52.0 5.03e-01 82.8% 70.8%
4886584 3115.6.1.1 a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › RpoY 0.71 65.0 6.06e-01 100.0% 95.7%
4364088 3115.4.1.0 a+b two layers › GP2-like › Uncharacterized conserved protein Il1583 › Uncharacterized conserved protein Il1583 0.71 52.0 5.77e-01 77.6% 100.0%
4030871 3115.6.1.1 a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › RpoY 0.71 64.0 6.04e-01 100.0% 95.7%
394175 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.70 57.0 4.47e-01 89.7% 52.0%
3926687 302.1.1.1 a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C 0.70 57.0 4.54e-01 91.4% 51.7%
3216210 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.70 54.0 5.73e-01 86.2% 100.0%
3942988 4187.2.1.1 a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 › NAGPA 0.69 50.0 4.86e-01 81.0% 69.2%
3702557 3945.1.1.0 alpha superhelices › N-terminal fragment of dynein heavy chain › N-terminal fragment of dynein heavy chain › N-terminal fragment of dynein heavy chain 0.69 56.0 4.25e-01 87.9% 40.0%
1844216 4007.1.1.1 a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg 0.69 50.0 5.28e-01 79.3% 90.2%
5014684 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.68 61.0 6.10e-01 98.3% 98.3%
5062146 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.67 52.0 4.69e-01 86.2% 100.0%
5059379 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.66 54.0 5.11e-01 89.7% 100.0%
3977819 304.147.1.0 a+b two layers › Alpha-beta plaits › Tetrahydrodipicolinate acetyltransferase N-terminal domain › Tetrahydrodipicolinate acetyltransferase N-terminal domain 0.66 52.0 5.15e-01 84.5% 100.0%
3973395 304.163.1.0 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain 0.65 50.0 4.97e-01 82.8% 100.0%
2794904 807.1.1.1 a+b two layers › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › CpcD 0.65 53.0 5.10e-01 91.4% 98.5%
4452949 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.65 50.0 4.39e-01 86.2% 84.4%
3923043 4326.1.1.1 a+b two layers › ERH-like › ERH-like › ERH-like › ER 0.64 51.0 4.29e-01 87.9% 76.0%
3399490 379.1.1.0 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors 0.63 49.0 4.78e-01 100.0% 76.9%
2557261 807.1.1.1 a+b two layers › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › CpcD 0.62 51.0 4.39e-01 91.4% 71.7%
3285401 3986.2.1.0 a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd 0.61 46.0 4.29e-01 84.5% 68.0%
3455763 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.61 48.0 3.86e-01 84.5% 90.0%
2723970 302.4.1.0 a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit 0.61 47.0 3.83e-01 89.7% 53.7%
4654177 1119.1.1.1 a+b complex topology › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › 6-carboxyhexanoate-CoA ligase › BioW 0.61 50.0 3.42e-01 100.0% 97.6%
5036777 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.60 46.0 4.30e-01 84.5% 94.7%
4973338 862.1.1.1 a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › DNA_primase_S 0.60 47.0 3.14e-01 100.0% 18.9%
5009387 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.60 45.0 4.53e-01 82.8% 100.0%
3223684 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.60 46.0 3.88e-01 86.2% 50.5%
3761390 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.59 44.0 3.49e-01 89.7% 36.9%
2006900 302.4.1.0 a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit 0.59 45.0 3.84e-01 87.9% 51.0%
3933396 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.59 45.0 3.80e-01 86.2% 52.4%
5037079 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 46.0 4.46e-01 86.2% 89.2%
3405565 221.1.1.6 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.58 45.0 3.89e-01 87.9% 70.5%
3576143 221.1.1.113 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_3 0.57 42.0 3.56e-01 84.5% 76.4%
3586087 11.1.4.111 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › fn3 0.56 44.0 3.75e-01 87.9% 64.0%
5080144 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.56 47.0 4.50e-01 98.3% 98.6%
4029586 10.32.1.203 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Seipin 0.56 42.0 3.29e-01 87.9% 72.7%
3490257 11.1.4.75 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › NOMO_3rd 0.55 42.0 3.45e-01 87.9% 60.8%
3649276 887.1.1.0 a+b two layers › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e 0.55 47.0 3.77e-01 100.0% 90.8%
4927303 525.1.1.1 a+b two layers › Urease, gamma-subunit › Urease, gamma-subunit › Urease, gamma-subunit › Urease_gamma 0.54 42.0 3.42e-01 87.9% 90.0%
3805836 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.54 44.0 3.41e-01 91.4% 68.1%
3264069 822.1.1.2 a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF_2 0.54 40.0 4.04e-01 82.8% 80.0%
3453549 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.54 45.0 3.69e-01 98.3% 51.3%
4144303 11.1.1.3 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig 0.53 39.0 3.06e-01 84.5% 34.5%
3722266 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.52 39.0 3.23e-01 87.9% 84.0%