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MZ043613.1__QVW53942.1__TaPaz_161__00161

Bact-Vir

MZ043613.1__QVW53942.1__TaPaz_161__00161

Identity

Accession:
MZ043613 ↗
Kingdom:
phage

Quality

83.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-59
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4n8nA00 3.30.70.3040 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 60.0 4.94e-01 96.6% 97.1%
8cwoF01 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.66 58.0 5.00e-01 98.3% 97.8%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.65 58.0 4.14e-01 100.0% 46.7%
5yppA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 58.0 5.00e-01 100.0% 85.6%
3ibwA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 55.0 5.05e-01 100.0% 93.7%
2cuwA00 3.30.1280.10 Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS 0.63 55.0 4.92e-01 100.0% 100.0%
2jsxA01 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.63 55.0 5.15e-01 98.3% 98.6%
2cyyA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.63 55.0 4.70e-01 100.0% 75.8%
2mcfA00 3.40.50.11630 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.62 54.0 4.09e-01 100.0% 58.1%
6lxgA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 53.0 4.92e-01 96.6% 100.0%
2joqA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 53.0 4.90e-01 98.3% 100.0%
2jheA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.61 53.0 4.80e-01 100.0% 87.7%
1wg1A01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.61 54.0 5.05e-01 100.0% 100.0%
7oocE01 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.60 50.0 4.49e-01 96.6% 100.0%
1xtzA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.60 51.0 4.50e-01 94.8% 97.6%
3gqcC04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.60 52.0 4.17e-01 100.0% 60.8%
5wm1A05 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.59 51.0 4.12e-01 100.0% 62.4%
1lk5A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.59 50.0 4.55e-01 94.8% 97.5%
1vwxr00 3.30.390.110 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.59 51.0 4.03e-01 100.0% 48.8%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.58 44.0 3.93e-01 100.0% 55.4%
2d73A03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.58 44.0 3.67e-01 100.0% 44.2%
4njcA00 3.10.20.730 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like 0.58 44.0 4.40e-01 100.0% 85.0%
2rrnA01 3.30.70.2040 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 49.0 4.43e-01 100.0% 92.8%
2bopA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.57 50.0 4.46e-01 100.0% 92.9%
2jvfA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.57 43.0 3.83e-01 100.0% 54.3%
1ksiA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.56 45.0 2.72e-01 100.0% 12.5%
1b33N01 3.30.1490.170 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Allophycocyanin linker chain (domain) 0.54 43.0 4.47e-01 100.0% 94.5%
3s2cJ01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.54 42.0 3.34e-01 100.0% 37.9%
2y2wD01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.54 40.0 3.14e-01 100.0% 36.4%
1t8rA01 3.30.1730.10 Alpha Beta › 2-Layer Sandwich › amp nucleosidase, domain 1 › AMP nucleoside phosphorylase, N-terminal domain 0.54 47.0 3.52e-01 100.0% 41.1%
4i3gA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 44.0 3.68e-01 100.0% 89.5%
2byeA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.52 39.0 3.41e-01 100.0% 50.5%
1y7xA02 2.30.30.550 Mainly Beta › Roll › SH3 type barrels. › Major Vault Protein repeat 0.52 41.0 4.18e-01 100.0% 89.3%
3kfwX02 3.30.70.2650 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 34.0 3.20e-01 84.5% 50.0%
2kr7A01 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.51 42.0 3.72e-01 100.0% 88.3%
4nn5C02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 33.0 2.91e-01 100.0% 40.4%
2pn5A07 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 44.0 3.63e-01 100.0% 58.5%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3971355 304.12.1.2 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MgtC_SapB_C 0.69 63.0 5.49e-01 100.0% 94.1%
2093009 304.12.1.1 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › Ribosomal_S6 0.69 61.0 5.18e-01 100.0% 92.7%
4576030 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.67 62.0 5.48e-01 100.0% 88.7%
3721769 304.8.1.22 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › AHAS-like_ACT 0.67 58.0 4.90e-01 100.0% 75.0%
4934810 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.66 59.0 5.31e-01 100.0% 93.8%
4979323 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.66 59.0 5.10e-01 100.0% 86.7%
4512374 304.8.1.22 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › AHAS-like_ACT 0.66 59.0 5.19e-01 100.0% 89.4%
3178013 304.9.1.103 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF26763 0.66 60.0 4.97e-01 100.0% 92.0%
4973396 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.65 57.0 4.03e-01 100.0% 42.2%
3288965 304.7.1.0 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.64 56.0 4.66e-01 100.0% 97.1%
4975915 304.4.1.29 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg_3 0.64 55.0 4.82e-01 100.0% 87.8%
3970804 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 55.0 5.02e-01 100.0% 86.3%
5081005 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.63 56.0 4.98e-01 100.0% 96.4%
4263573 304.8.1.8 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 0.63 53.0 4.90e-01 94.8% 98.7%
4669788 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.63 51.0 3.94e-01 100.0% 40.0%
4985428 3986.2.1.0 a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd 0.63 55.0 5.04e-01 100.0% 76.9%
3511799 304.128.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.63 56.0 4.76e-01 100.0% 81.1%
3331421 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.63 56.0 5.43e-01 100.0% 90.8%
3683470 2002.1.1.30 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.63 54.0 3.59e-01 96.6% 28.7%
5062146 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.62 53.0 4.73e-01 98.3% 96.4%
4944201 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.62 54.0 5.12e-01 100.0% 98.6%
3484106 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 55.0 4.65e-01 100.0% 87.4%
4634052 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.62 53.0 4.69e-01 100.0% 93.2%
3488222 304.120.1.9 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › MBTP1_N 0.62 55.0 4.65e-01 100.0% 88.4%
5073608 304.16.1.0 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like 0.62 55.0 4.79e-01 100.0% 89.8%
4979747 304.12.1.0 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 0.62 55.0 5.16e-01 100.0% 97.1%
4067121 304.8.1.8 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 0.62 53.0 4.75e-01 100.0% 90.6%
4991070 304.8.1.43 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_5 0.61 51.0 4.84e-01 94.8% 100.0%
4176322 304.8.1.3 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NapD 0.61 52.0 4.74e-01 100.0% 88.7%
5028585 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.60 51.0 4.60e-01 100.0% 91.8%
4299026 304.30.1.1 a+b two layers › Alpha-beta plaits › D-ribose-5-phosphate isomerase (RpiA), lid domain › D-ribose-5-phosphate isomerase (RpiA), lid domain › Rib_5-P_isom_A 0.60 52.0 4.76e-01 96.6% 98.7%
3487137 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 52.0 3.99e-01 100.0% 43.1%
4983932 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.60 51.0 4.64e-01 100.0% 98.8%
4314849 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.59 49.0 4.47e-01 100.0% 96.5%
5070847 304.4.1.1 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.59 51.0 4.64e-01 100.0% 90.0%
3648646 304.30.1.1 a+b two layers › Alpha-beta plaits › D-ribose-5-phosphate isomerase (RpiA), lid domain › D-ribose-5-phosphate isomerase (RpiA), lid domain › Rib_5-P_isom_A 0.59 51.0 4.64e-01 98.3% 100.0%
3411061 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.59 47.0 3.31e-01 100.0% 25.2%
3588189 12.1.1.4 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-L-AF_C 0.58 47.0 3.78e-01 100.0% 44.0%
4575757 12.1.1.4 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Alpha-L-AF_C 0.58 45.0 3.75e-01 100.0% 47.3%
3741530 3662.1.1.0 a+b two layers › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related 0.57 42.0 3.17e-01 77.6% 89.1%
3673136 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 50.0 3.76e-01 100.0% 47.6%
3639368 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.57 48.0 3.94e-01 100.0% 50.9%
5078176 304.4.1.1 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.57 48.0 4.52e-01 100.0% 94.7%
5057681 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 46.0 4.08e-01 94.8% 98.9%
3489149 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 47.0 4.12e-01 100.0% 71.6%
5082628 304.128.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB 0.56 47.0 3.97e-01 96.6% 100.0%
4572391 11.1.1.9 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N 0.55 46.0 3.51e-01 100.0% 50.6%
3705694 2484.1.1.153 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 0.54 47.0 2.98e-01 100.0% 23.6%
3495305 3785.1.1.1 a+b three layers › Suppressor of Fused, C-terminal domain › Suppressor of Fused, C-terminal domain › Suppressor of Fused, C-terminal domain › SARA_C 0.54 45.0 3.52e-01 100.0% 69.0%
3928871 101.1.2.51 alpha arrays › HTH › HTH › winged helix domain › Sec62 0.54 41.0 3.11e-01 100.0% 31.5%
3619356 1116.1.1.2 a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain › MCLN_ECD 0.53 47.0 3.26e-01 100.0% 35.7%
3469970 3785.1.1.0 a+b three layers › Suppressor of Fused, C-terminal domain › Suppressor of Fused, C-terminal domain › Suppressor of Fused, C-terminal domain 0.53 45.0 3.46e-01 100.0% 65.5%
3266685 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.53 42.0 2.32e-01 93.1% 21.2%
3992476 1116.1.1.2 a+b two layers › Polycystin-mucolipin domain › Polycystin-mucolipin domain › Polycystin-mucolipin domain › MCLN_ECD 0.53 47.0 3.56e-01 100.0% 51.0%
4578778 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.53 43.0 2.67e-01 100.0% 16.4%
3326913 12.3.1.2 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Cu_amine_oxid 0.52 41.0 2.79e-01 100.0% 20.9%
5016503 77.1.1.0 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein 0.52 43.0 3.59e-01 100.0% 50.9%
3743405 11.1.1.643 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_POM152 0.52 45.0 3.64e-01 100.0% 50.9%
4197366 10.32.1.265 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF29487 0.52 44.0 3.18e-01 100.0% 47.0%
3732370 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.52 40.0 4.03e-01 100.0% 86.7%
3688941 11.1.1.643 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_POM152 0.52 40.0 3.55e-01 100.0% 56.8%
3720761 2484.1.1.153 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 0.51 43.0 2.76e-01 96.6% 32.1%
4947556 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 43.0 3.24e-01 98.3% 64.7%