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MZ047271.2__UWJ04558.1__KJILBIEH_00059__00059

Bact-Vir

MZ047271.2__UWJ04558.1__KJILBIEH_00059__00059

Identity

Accession:
MZ047271 ↗
Kingdom:
phage

Quality

76.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Campylobacter_phage_PC10

TaxID: 2836053

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 244-432
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wlhA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 28.0 3.73e-01 98.9% 73.3%
6b6lA05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 33.0 4.24e-01 99.5% 86.2%
4cucA05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 34.0 4.24e-01 99.5% 85.3%
1h6eA02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.61 32.0 4.13e-01 98.9% 89.5%
6z0jA03 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.59 31.0 3.74e-01 99.5% 75.2%
4b9gA00 2.60.40.3480 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 39.0 4.37e-01 100.0% 87.7%
2xomA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 34.0 3.88e-01 84.1% 78.6%
4gwmA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 38.0 4.07e-01 85.2% 78.0%
4fx5A01 2.60.40.3670 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 35.0 3.95e-01 86.8% 81.7%
1f8nA01 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.56 36.0 4.13e-01 97.4% 86.0%
2y7lA02 2.60.40.2430 Mainly Beta › Sandwich › Immunoglobulin-like › Agglutinin-like protein, N-terminal domain, N2 subdomain 0.56 36.0 3.96e-01 100.0% 80.1%
4f8lA00 2.60.40.3590 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 34.0 3.95e-01 99.5% 85.5%
4mbrA02 2.60.40.1290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 37.0 3.96e-01 100.0% 78.3%
2q1fA01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.53 35.0 3.72e-01 83.1% 74.3%
1mkfA01 2.60.40.1330 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 37.0 3.65e-01 89.4% 65.8%
4mboA02 2.60.40.1290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 36.0 3.93e-01 100.0% 83.4%
4a2bA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 28.0 3.23e-01 81.0% 68.1%
1tg7A05 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 34.0 3.51e-01 95.8% 68.8%
4r8oA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.52 24.0 3.37e-01 77.8% 86.7%
3iuwA00 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.51 22.0 3.21e-01 95.8% 92.4%
1a7sA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.50 24.0 3.08e-01 98.9% 77.1%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4943023 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.74 37.0 4.46e-01 95.8% 70.0%
3847758 10.10.1.1 ↗ beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT 0.62 39.0 4.50e-01 98.4% 85.7%
4956761 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.58 36.0 3.90e-01 99.5% 72.5%
3540174 10.10.1.1 ↗ beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT 0.57 41.0 4.69e-01 99.5% 98.6%
4970133 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 37.0 3.96e-01 99.5% 77.6%
5039695 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 34.0 3.89e-01 89.4% 82.1%
1030892 11.26.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Viral chemokine binding protein m3 › Viral chemokine binding protein m3 › M3 0.53 37.0 3.65e-01 88.9% 65.7%
3224238 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.53 31.0 3.89e-01 97.9% 98.2%
3451480 10.10.1.1 ↗ beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT 0.53 39.0 4.37e-01 99.5% 100.0%
3628430 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.52 30.0 3.88e-01 88.9% 100.0%
3828729 11.1.1.394 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF568 0.52 38.0 3.76e-01 92.1% 69.8%
3496483 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.51 29.0 3.79e-01 82.5% 100.0%
D2 medium residues 166-243
PDB
Domain cluster: rep: KM272873.1__AIM19606.1__X__00001__D205-272
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.66 37.0 4.30e-01 80.8% 80.8%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.66 36.0 4.38e-01 79.5% 89.1%
2pbfA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.64 52.0 3.79e-01 88.5% 77.1%
2pmeA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.64 53.0 3.60e-01 93.6% 87.3%
2gjvA00 3.30.2000.10 Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like 0.60 50.0 4.21e-01 93.6% 92.6%
6j7cA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.58 44.0 3.46e-01 80.8% 66.9%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 36.0 3.90e-01 97.4% 75.0%
3c4aA02 3.30.9.20 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › 0.58 41.0 3.35e-01 73.1% 72.3%
2kgyA00 3.30.505.20 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › 0.58 47.0 4.47e-01 89.7% 95.7%
3ednA01 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.57 42.0 3.61e-01 80.8% 70.9%
7n0eB02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.57 45.0 3.92e-01 87.2% 98.4%
1cseI00 3.30.10.10 Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A 0.57 37.0 4.04e-01 71.8% 82.5%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 34.0 3.82e-01 74.4% 81.4%
4uy9A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 32.0 3.10e-01 98.7% 51.1%
4pl9A00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.54 43.0 3.55e-01 88.5% 92.0%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 36.0 3.62e-01 76.9% 67.1%
1clwA00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.54 37.0 2.28e-01 91.0% 10.3%
3ihmA02 3.30.9.40 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › 0.53 37.0 3.06e-01 73.1% 88.2%
2v1qA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 33.0 3.68e-01 74.4% 83.3%
1vqzA02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.52 34.0 3.32e-01 75.6% 59.1%
3d7rA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.52 46.0 3.11e-01 100.0% 97.0%
1wquA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.52 41.0 3.66e-01 87.2% 78.9%
2xp1A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.51 41.0 3.89e-01 93.6% 72.6%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 37.0 3.73e-01 80.8% 76.9%
ECOD (17)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3821919 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.61 32.0 3.57e-01 70.5% 65.0%
3539914 2007.1.2.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.59 49.0 3.74e-01 92.3% 87.6%
151608 294.1.1.1 ↗ a+b two layers › CI-2 family of serine protease inhibitors-like › CI-2 family of serine protease inhibitors › CI-2 family of serine protease inhibitors › potato_inhibit 0.57 38.0 4.00e-01 71.8% 76.1%
3941356 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.57 49.0 4.32e-01 100.0% 87.5%
3579037 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.56 46.0 4.25e-01 93.6% 90.5%
4084190 4.1.1.98 ↗ beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.55 36.0 4.03e-01 97.4% 88.1%
3933294 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.54 45.0 4.15e-01 93.6% 92.4%
3674451 294.1.1.1 ↗ a+b two layers › CI-2 family of serine protease inhibitors-like › CI-2 family of serine protease inhibitors › CI-2 family of serine protease inhibitors › potato_inhibit 0.54 36.0 3.82e-01 80.8% 81.5%
3623169 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.54 45.0 4.19e-01 97.4% 78.1%
4992459 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.53 30.0 3.18e-01 76.9% 58.6%
3774694 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.53 45.0 3.48e-01 94.9% 96.7%
3732468 7575.1.1.11 ↗ a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › PF31181 0.53 44.0 3.08e-01 96.2% 70.0%
3390132 2007.1.2.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.53 43.0 3.49e-01 93.6% 96.4%
4944227 838.1.1.1 ↗ a+b two layers › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal protein S19 › Ribosomal_S19 0.52 35.0 3.00e-01 71.8% 41.5%
3583928 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.50 44.0 4.06e-01 100.0% 93.3%
4402716 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.50 41.0 3.97e-01 88.5% 80.0%
3929992 214.1.1.1 ↗ a+b two layers › SH2 › SH2 › SH2 › SH2 0.50 42.0 3.78e-01 98.7% 93.3%