Back to structures

MZ092003.1__QVQ56188.1__X__00031

Bact-Vir

MZ092003.1__QVQ56188.1__X__00031

Identity

Accession:
MZ092003 ↗
Kingdom:
phage

Quality

83.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 35-110
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1m5iA00 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.62 51.0 4.62e-01 89.5% 79.0%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3607135 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.75 64.0 5.23e-01 92.1% 74.1%
4650373 604.1.1.169 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Med14 0.71 53.0 4.75e-01 78.9% 57.1%
3628140 3826.1.1.43 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Med14 0.71 57.0 5.04e-01 86.8% 60.0%
5064072 5058.1.1.0 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region 0.71 49.0 4.67e-01 73.7% 61.1%
4386557 622.1.1.29 alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › Med14 0.70 51.0 4.80e-01 77.6% 62.1%
3474600 4207.1.2.48 alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region › Med14 0.70 56.0 5.14e-01 86.8% 66.0%
3506234 5043.1.1.15 extended segments › Sensor proteins transmembrane domains › Htr2 transmembrane domain-like › Htr2 transmembrane domain-like › Med14 0.69 58.0 5.24e-01 92.1% 66.7%
3548646 604.6.1.52 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › Med14 0.67 56.0 5.12e-01 92.1% 70.0%
3915818 4207.1.1.35 alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › Med14 0.66 55.0 5.08e-01 92.1% 70.0%
5012794 4333.1.1.0 a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain 0.64 51.0 3.23e-01 84.2% 45.1%