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MZ092003.1__QVQ56202.1__X__00046
Bact-VirMZ092003.1__QVQ56202.1__X__00046
Identity
- Accession:
- MZ092003 ↗
- Kingdom:
- phage
Quality
80.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-41
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xf5B00 | 1.10.10.1530 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.95 | 87.0 | 7.86e-01 | 100.0% | 78.0% |
| 3fzgA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.68 | 58.0 | 3.69e-01 | 100.0% | 47.4% |
| 2ld7B00 | 1.20.1160.11 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix | 0.65 | 53.0 | 4.43e-01 | 100.0% | 57.3% |
| 3g2eB00 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.64 | 49.0 | 3.31e-01 | 100.0% | 87.6% |
| 3ne5B04 | 6.10.140.730 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 49.0 | 4.67e-01 | 100.0% | 88.2% |
| 3on3B00 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.62 | 48.0 | 3.29e-01 | 100.0% | 25.7% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.61 | 45.0 | 3.86e-01 | 84.2% | 52.3% |
| 2d1hB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 49.0 | 3.81e-01 | 100.0% | 48.0% |
| 6qm7N00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.60 | 51.0 | 3.17e-01 | 97.4% | 18.3% |
| 1v07A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.59 | 49.0 | 3.64e-01 | 100.0% | 52.7% |
| 3d5lB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 45.0 | 3.52e-01 | 97.4% | 38.2% |
| 4gltA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.58 | 42.0 | 3.17e-01 | 92.1% | 28.9% |
| 3rmqA02 | 6.10.140.1650 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 46.0 | 4.25e-01 | 100.0% | 73.2% |
| 1y6xA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.57 | 42.0 | 3.46e-01 | 92.1% | 60.9% |
| 2whnA00 | 1.20.81.30 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › Type II secretion system (T2SS), domain F | 0.53 | 43.0 | 3.24e-01 | 100.0% | 63.6% |
| 4hhxA00 | 1.20.81.30 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › Type II secretion system (T2SS), domain F | 0.52 | 38.0 | 3.08e-01 | 100.0% | 46.2% |
| 3fx3B02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 42.0 | 3.30e-01 | 100.0% | 53.7% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4381851 | 3151.1.1.2 ↗ | alpha arrays › SPP1 phage GP23.1 › SPP1 phage GP23.1 › SPP1 phage GP23.1 › Phage_XkdX | 0.75 | 64.0 | 6.10e-01 | 100.0% | 91.1% |
| 4995679 | 101.35.1.0 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX | 0.71 | 57.0 | 5.39e-01 | 100.0% | 84.0% |
| 4132373 | 3860.1.1.0 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm | 0.69 | 56.0 | 4.41e-01 | 100.0% | 50.0% |
| 4570259 | 4156.1.1.4 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_C | 0.68 | 51.0 | 3.40e-01 | 92.1% | 20.0% |
| 4937490 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.66 | 51.0 | 5.08e-01 | 97.4% | 92.5% |
| 4499345 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 51.0 | 4.88e-01 | 100.0% | 80.0% |
| 4933758 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 48.0 | 4.80e-01 | 100.0% | 84.4% |
| 4525947 | 101.40.1.1 ↗ | alpha arrays › HTH › 40S ribosomal protein S13 N-terminal domain › 40S ribosomal protein S13 N-terminal domain › Ribosomal_S13_N | 0.64 | 53.0 | 4.22e-01 | 100.0% | 52.9% |
| 4990602 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.63 | 48.0 | 3.26e-01 | 100.0% | 24.3% |
| 3449297 | 101.1.1.298 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF7645 | 0.63 | 48.0 | 4.43e-01 | 100.0% | 66.7% |
| 5041744 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.61 | 46.0 | 3.29e-01 | 100.0% | 91.3% |
| 5049709 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.61 | 51.0 | 2.96e-01 | 100.0% | 11.6% |
| 4010726 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 49.0 | 4.16e-01 | 100.0% | 53.8% |
| 3220131 | 611.3.1.0 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.61 | 50.0 | 3.98e-01 | 100.0% | 50.6% |
| 3696929 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 47.0 | 4.04e-01 | 97.4% | 60.0% |
| 4619813 | 108.1.2.1 ↗ | alpha arrays › EF-hand › EF-hand-related › Type I dockerin domain › Dockerin_1 | 0.59 | 45.0 | 3.94e-01 | 97.4% | 55.0% |
| 4999942 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.57 | 46.0 | 3.23e-01 | 100.0% | 57.3% |
| 4962844 | 604.4.1.10 ↗ | alpha bundles › Spectrin repeat-like › Alpha-hemoglobin stabilizing protein AHSP › Alpha-hemoglobin stabilizing protein AHSP › PF26679 | 0.56 | 43.0 | 3.42e-01 | 100.0% | 72.0% |
| 4928681 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.54 | 44.0 | 3.19e-01 | 100.0% | 66.2% |
| 4304749 | 304.8.1.81 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › REP_ORF2-G2P | 0.51 | 39.0 | 2.47e-01 | 100.0% | 79.6% |
| 3890969 | 298.1.1.8 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C | 0.50 | 39.0 | 2.40e-01 | 100.0% | 13.0% |