Back to structures

MZ092003.1__QVQ56224.1__X__00069

Bact-Vir

MZ092003.1__QVQ56224.1__X__00069

Identity

Accession:
MZ092003 ↗
Kingdom:
phage

Quality

82.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 8-65
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6hn7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 67.0 6.26e-01 93.1% 83.3%
3ucsA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.76 63.0 5.30e-01 93.1% 58.6%
5d8cA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.74 57.0 4.56e-01 87.9% 45.2%
2zhgA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.73 62.0 4.87e-01 98.3% 45.5%
1z4hA01 1.10.238.160 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › 0.73 57.0 5.74e-01 87.9% 96.6%
2kbiA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.71 63.0 5.69e-01 100.0% 79.7%
1y6uA01 3.90.105.50 Alpha Beta › Alpha-Beta Complex › Molybdopterin biosynthesis moea protein, domain 2 › 0.70 51.0 5.38e-01 77.6% 100.0%
4c0kA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.66 57.0 4.83e-01 100.0% 63.4%
2o0yB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 47.0 4.56e-01 75.9% 70.8%
6ocxA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.64 56.0 4.10e-01 100.0% 44.0%
3to7A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 48.0 4.31e-01 81.0% 64.2%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 50.0 4.22e-01 86.2% 56.8%
4c2dA02 1.10.101.10 Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD 0.63 44.0 3.94e-01 87.9% 51.8%
2dt5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 44.0 4.22e-01 79.3% 64.4%
1psrA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.62 52.0 4.47e-01 100.0% 64.0%
2fa5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 48.0 3.60e-01 84.5% 36.0%
4ggnB01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.60 48.0 4.80e-01 100.0% 88.5%
2qm3A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 45.0 4.10e-01 84.5% 61.4%
1kgqA01 1.10.166.10 Mainly Alpha › Orthogonal Bundle › Tetrahydrodipicolinate-N-succinyltransferase; Chain A, domain 1 › Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain 0.59 30.0 2.85e-01 82.8% 41.4%
4i5jA02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.59 49.0 3.76e-01 100.0% 38.2%
2i7aA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.59 50.0 3.76e-01 100.0% 38.9%
1tizA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.59 48.0 4.69e-01 94.8% 82.1%
2p8tA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 48.0 4.46e-01 89.7% 81.3%
3nrvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 40.0 3.17e-01 74.1% 37.2%
1ij5A03 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.58 47.0 3.75e-01 96.6% 45.0%
3fndA02 3.40.5.30 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › (Trans)glycosidases - domain 2 0.58 32.0 3.53e-01 87.9% 68.2%
3nxaB00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.57 49.0 4.23e-01 100.0% 69.1%
7eebI01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.57 47.0 3.55e-01 100.0% 58.6%
1t98A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 47.0 4.09e-01 89.7% 72.4%
3tduA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.57 49.0 4.30e-01 100.0% 74.4%
7po9A01 3.40.1800.20 Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › 0.56 47.0 4.25e-01 98.3% 75.6%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 40.0 3.27e-01 79.3% 42.7%
3cuqA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 40.0 3.66e-01 75.9% 62.5%
5fo5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 38.0 3.44e-01 74.1% 67.0%
4mvfA03 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 45.0 3.33e-01 96.6% 92.0%
3buxB02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 46.0 4.12e-01 100.0% 80.9%
1s6iA02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 42.0 3.53e-01 91.4% 47.2%
2becA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 46.0 3.35e-01 100.0% 80.7%
6i7dB01 6.20.240.20 Special › Other non-globular › Alpha-Beta Plaits › 0.55 40.0 4.00e-01 81.0% 94.9%
1irjA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 42.0 3.91e-01 94.8% 76.5%
1f4qA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.55 48.0 3.52e-01 100.0% 46.6%
2e6wA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.54 45.0 3.91e-01 98.3% 75.0%
3v7nA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 41.0 2.83e-01 86.2% 77.3%
4n5xA02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.53 43.0 4.09e-01 100.0% 93.3%
2bl0C01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.52 43.0 4.05e-01 100.0% 77.3%
ECOD (87)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3588263 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.82 67.0 6.14e-01 89.7% 84.0%
4031948 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.77 63.0 5.06e-01 91.4% 53.0%
5053673 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.75 64.0 6.25e-01 100.0% 100.0%
4094061 101.1.9.98 alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF4004 0.73 64.0 5.66e-01 100.0% 80.0%
3521825 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.72 63.0 5.95e-01 100.0% 82.9%
4379440 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.71 62.0 5.01e-01 100.0% 53.9%
3543149 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.71 55.0 5.66e-01 86.2% 98.2%
1834379 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.68 59.0 5.68e-01 100.0% 93.9%
4506746 4964.1.1.0 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.68 49.0 3.47e-01 100.0% 24.2%
3510838 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.68 51.0 5.29e-01 82.8% 100.0%
3559536 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.67 59.0 5.49e-01 100.0% 78.7%
3984393 101.1.9.88 alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_pRha 0.67 54.0 4.56e-01 96.6% 68.2%
3683028 108.1.1.29 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.67 58.0 4.96e-01 100.0% 65.3%
3295721 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.67 52.0 4.23e-01 91.4% 45.5%
3797006 108.1.1.96 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.66 53.0 5.09e-01 91.4% 78.6%
4485624 108.1.1.29 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.66 57.0 4.98e-01 100.0% 68.9%
None 0.65 57.0 4.73e-01 100.0% 65.7%
3779468 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.65 55.0 4.89e-01 100.0% 70.0%
3895660 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.65 51.0 4.72e-01 87.9% 73.3%
3485466 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.65 54.0 5.11e-01 100.0% 77.3%
3188112 108.1.1.25 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_4 0.65 56.0 4.31e-01 100.0% 47.4%
1198650 108.1.1.98 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7 0.65 55.0 4.79e-01 100.0% 64.9%
4172563 108.1.1.97 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.64 54.0 5.40e-01 94.8% 95.0%
3617231 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.64 52.0 4.94e-01 93.1% 78.6%
4218411 108.1.1.27 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6 0.64 53.0 4.75e-01 96.6% 67.1%
3902818 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.63 54.0 4.60e-01 100.0% 76.0%
3595879 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.63 56.0 4.93e-01 100.0% 69.4%
3431935 108.1.1.96 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.63 52.0 4.79e-01 98.3% 76.2%
3575885 108.1.1.28 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 0.62 52.0 4.54e-01 100.0% 63.2%
4231491 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.62 52.0 4.23e-01 100.0% 48.3%
3392923 377.1.1.18 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-AD 0.61 50.0 4.64e-01 94.8% 78.7%
3707302 108.1.1.97 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.61 51.0 4.81e-01 100.0% 77.3%
1293858 108.1.1.158 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, CAPN13-like_C_EFh 0.61 51.0 4.38e-01 100.0% 59.0%
3624813 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.61 51.0 4.59e-01 100.0% 68.8%
3422387 108.1.1.99 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 0.61 52.0 4.35e-01 100.0% 85.7%
3843360 108.1.1.29 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.60 50.0 3.81e-01 100.0% 38.1%
3751236 108.1.1.27 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6 0.60 50.0 4.56e-01 100.0% 71.8%
132993 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.60 50.0 4.41e-01 100.0% 61.1%
3598352 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.60 52.0 4.65e-01 100.0% 70.6%
3523825 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.60 50.0 3.87e-01 100.0% 42.8%
3883134 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.60 49.0 4.50e-01 96.6% 73.8%
4000044 108.1.1.97 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_7 0.60 49.0 4.35e-01 100.0% 62.2%
3778570 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.60 51.0 4.36e-01 100.0% 60.0%
3649970 108.1.1.96 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.59 50.0 3.69e-01 100.0% 35.3%
3911126 108.1.1.2 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1,S_100 0.59 50.0 4.30e-01 100.0% 68.0%
3445048 108.1.1.28 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 0.59 48.0 4.55e-01 96.6% 74.7%
3472510 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.59 49.0 4.21e-01 96.6% 61.0%
3275054 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.58 47.0 4.41e-01 94.8% 80.0%
3595462 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.58 48.0 4.57e-01 96.6% 82.9%
3864952 108.1.1.28 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 0.58 48.0 4.59e-01 100.0% 80.0%
3484509 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.58 47.0 3.89e-01 100.0% 69.6%
3485448 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.58 47.0 4.49e-01 100.0% 77.3%
3513181 108.1.1.29 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.58 47.0 4.43e-01 96.6% 78.7%
5008980 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 43.0 3.70e-01 89.7% 47.6%
1198960 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.57 48.0 4.33e-01 98.3% 67.4%
1762928 108.1.1.96 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.57 46.0 4.43e-01 96.6% 81.2%
3490332 108.1.1.96 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.57 46.0 3.47e-01 100.0% 36.4%
4328129 108.1.1.99 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 0.57 48.0 3.44e-01 100.0% 81.6%
4023899 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.56 42.0 3.92e-01 91.4% 64.0%
3712733 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.56 46.0 3.44e-01 94.8% 36.9%
4210808 108.1.1.96 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.56 45.0 4.39e-01 91.4% 86.2%
3608516 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.56 48.0 3.88e-01 100.0% 81.7%
3923086 108.1.1.101 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_7, EF-hand_8 0.56 44.0 4.06e-01 100.0% 66.3%
3618002 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.56 43.0 3.94e-01 96.6% 61.2%
4029618 108.1.1.98 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7 0.56 46.0 3.58e-01 100.0% 90.0%
3617735 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.55 47.0 3.92e-01 100.0% 53.6%
3617285 108.1.1.29 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.55 43.0 3.98e-01 100.0% 64.7%
None 0.55 45.0 2.75e-01 100.0% 27.9%
4216981 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.55 45.0 3.84e-01 100.0% 55.5%
3302017 108.1.1.96 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.55 45.0 4.27e-01 100.0% 77.3%
3902433 108.1.1.101 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_7, EF-hand_8 0.55 44.0 3.03e-01 91.4% 82.7%
3276146 108.1.1.113 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6 0.55 45.0 4.20e-01 100.0% 75.0%
4024510 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.55 44.0 3.83e-01 96.6% 63.0%
3184 108.1.1.32 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_10 0.55 41.0 4.23e-01 84.5% 100.0%
3935329 108.1.1.96 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 0.55 44.0 4.18e-01 100.0% 76.0%
3874689 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.54 40.0 3.48e-01 87.9% 50.9%
4824669 108.1.1.98 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7 0.54 42.0 3.99e-01 98.3% 73.0%
161716 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.54 42.0 4.27e-01 94.8% 100.0%
3598178 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.53 43.0 3.92e-01 96.6% 65.9%
3549090 108.1.1.98 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7 0.53 43.0 3.15e-01 96.6% 34.1%
3373845 108.1.1.98 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7 0.53 42.0 4.01e-01 98.3% 73.3%
4616191 108.1.1.98 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_5, EF-hand_7 0.53 41.0 4.05e-01 91.4% 81.5%
3215473 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.53 44.0 3.62e-01 100.0% 80.8%
3512732 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.52 44.0 3.63e-01 100.0% 84.3%
3260395 108.1.1.26 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5 0.51 41.0 3.78e-01 100.0% 67.1%
3480540 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.51 41.0 4.06e-01 100.0% 87.7%
3617387 108.1.1.29 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.50 41.0 3.58e-01 100.0% 60.0%
D2 medium residues 106-163
PDB
Domain cluster: representative
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2vkjA00 1.20.58.2030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.75 49.0 4.01e-01 72.4% 36.8%
4jylA02 1.10.12.10 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 0.74 51.0 5.43e-01 72.4% 85.7%
2klqA00 1.20.58.870 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.73 53.0 4.24e-01 77.6% 40.4%
3hpcX00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.73 55.0 3.99e-01 81.0% 65.2%
1oj6A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.72 58.0 4.28e-01 87.9% 36.1%
3owaB04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.71 58.0 4.22e-01 100.0% 33.1%
4fzwA02 1.10.12.10 Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 0.71 49.0 4.92e-01 72.4% 72.4%
4ioeA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.70 62.0 5.45e-01 100.0% 75.9%
2rdcA00 1.10.287.800 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 0.70 60.0 4.71e-01 100.0% 45.1%
8igrI01 2.40.270.10 Mainly Beta › Beta Barrel › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6 › DNA-directed RNA polymerase, subunit 2, domain 6 0.69 60.0 4.30e-01 100.0% 83.5%
1rp3A01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.69 49.0 4.34e-01 79.3% 51.8%
1yhuB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.68 50.0 3.74e-01 81.0% 31.9%
2rklF00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.68 54.0 5.62e-01 94.8% 98.1%
2pmrA00 1.20.1270.90 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like 0.68 48.0 4.36e-01 74.1% 80.3%
1lm3B00 1.20.120.10 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 0.67 55.0 4.59e-01 93.1% 50.9%
2oo2A00 1.20.1270.90 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like 0.67 47.0 4.26e-01 72.4% 73.7%
1z0jB00 4.10.860.20 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain 0.66 49.0 5.25e-01 82.8% 90.2%
1luwA01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.66 49.0 4.85e-01 86.2% 75.0%
2lm9A00 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.66 57.0 4.89e-01 100.0% 62.5%
2rbdA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.66 52.0 4.00e-01 93.1% 72.0%
3t6gB00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.66 57.0 4.39e-01 100.0% 44.0%
4ysxC00 1.20.1300.10 Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit 0.65 54.0 4.13e-01 100.0% 46.4%
1d2mA03 6.10.140.240 Special › Helix non-globular › Helix Hairpins › 0.65 48.0 4.69e-01 87.9% 74.2%
4fppB01 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.64 56.0 5.27e-01 100.0% 85.9%
1j30A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.64 51.0 3.93e-01 94.8% 37.6%
1k04A02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.64 55.0 4.59e-01 98.3% 58.7%
3txsC01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.63 54.0 5.04e-01 100.0% 88.0%
4hr1A00 1.20.1270.410 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.62 52.0 4.16e-01 94.8% 67.8%
1zhcA00 6.10.280.50 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 49.0 4.51e-01 86.2% 65.8%
1zpyA00 6.10.140.1960 Special › Helix non-globular › Helix Hairpins › 0.61 53.0 4.60e-01 98.3% 63.7%
1ydxA02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.61 53.0 4.63e-01 100.0% 90.0%
2yfkA02 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.61 45.0 3.20e-01 96.6% 24.5%
1bgfA00 1.10.532.10 Mainly Alpha › Orthogonal Bundle › Transcription Factor, Stat-4 › STAT transcription factor, N-terminal domain 0.60 47.0 3.77e-01 87.9% 46.0%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.60 51.0 4.76e-01 100.0% 74.7%
1nt2B02 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.60 49.0 4.76e-01 100.0% 83.6%
4iggA01 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.60 51.0 4.92e-01 100.0% 88.1%
2xzmO02 1.10.287.10 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding 0.59 46.0 4.30e-01 82.8% 68.6%
2gv9A05 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.59 47.0 4.69e-01 94.8% 84.7%
2qvaA02 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.59 48.0 4.95e-01 96.6% 98.1%
4h63K00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 45.0 3.91e-01 100.0% 59.2%
2wvxA04 1.20.1610.10 Mainly Alpha › Up-down Bundle › Glycosyl hydrolase family fold › alpha-1,2-mannosidases domains 0.50 43.0 3.01e-01 93.1% 59.0%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5054050 3896.1.1.0 alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase 0.82 63.0 4.28e-01 82.8% 24.6%
3323416 3831.1.1.7 alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › DUF842 0.80 70.0 5.80e-01 100.0% 55.2%
5057042 605.1.1.355 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › RDD 0.75 64.0 4.98e-01 100.0% 44.4%
3546710 3291.1.1.200 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › TAPR1-like 0.72 56.0 4.27e-01 84.5% 36.3%
3568826 5020.1.1.13 extended segments › Subunit VIII of photosystem I reaction centre, PsaI › Subunit VIII of photosystem I reaction centre, PsaI › Subunit VIII of photosystem I reaction centre, PsaI › TMEM219 0.71 52.0 5.05e-01 100.0% 69.2%
3554931 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.71 51.0 5.26e-01 100.0% 81.5%
4238998 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.70 59.0 5.66e-01 100.0% 85.7%
3461932 3922.1.1.189 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › DUF630 0.69 62.0 5.26e-01 100.0% 65.3%
4543996 3600.1.1.1 alpha bundles › uncharacterized protein SYNW0670 › uncharacterized protein SYNW0670 › uncharacterized protein SYNW0670 › YlqD 0.69 54.0 4.42e-01 100.0% 46.7%
5078048 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.69 61.0 5.60e-01 100.0% 86.7%
5047712 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.68 53.0 4.90e-01 87.9% 66.7%
3278617 5063.1.1.0 alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK 0.67 51.0 5.37e-01 86.2% 100.0%
4360366 632.22.1.1 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA 0.66 49.0 4.30e-01 100.0% 52.2%
3626983 310.2.1.2 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › MIX23 0.66 57.0 4.55e-01 100.0% 48.4%
4950709 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.66 51.0 5.01e-01 87.9% 81.5%
3897805 7022.1.1.1 alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › MBOAT 0.65 57.0 4.10e-01 100.0% 55.9%
4012407 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.65 51.0 5.09e-01 93.1% 88.3%
4964878 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.65 56.0 5.35e-01 100.0% 94.3%
3264065 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.65 56.0 5.06e-01 100.0% 98.8%
3693881 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.64 56.0 5.31e-01 100.0% 84.3%
4962781 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.64 52.0 4.86e-01 93.1% 74.7%
3715120 3826.1.1.0 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) 0.63 46.0 4.62e-01 79.3% 75.0%
3776400 192.5.1.1 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 0.62 53.0 4.87e-01 100.0% 73.8%
5060848 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.62 44.0 4.36e-01 79.3% 73.3%
4032572 7023.1.1.0 alpha bundles › helical ridge domain of D-alanyl transfer protein › helical ridge domain of D-alanyl transfer protein › helical ridge domain of D-alanyl transfer protein 0.62 51.0 4.11e-01 100.0% 62.3%
3588971 6026.1.1.0 alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain 0.62 45.0 4.17e-01 100.0% 61.3%
4393704 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 51.0 3.07e-01 100.0% 70.8%
3590755 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.61 49.0 4.94e-01 93.1% 90.0%
4013663 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.61 51.0 3.82e-01 98.3% 38.7%
3980428 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.60 48.0 4.54e-01 94.8% 72.0%
4375453 622.4.1.26 alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › HisKA 0.60 52.0 4.81e-01 100.0% 77.3%
3963355 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.60 50.0 4.71e-01 100.0% 80.0%
4033272 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.58 49.0 3.97e-01 100.0% 52.5%
3694629 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.56 48.0 4.37e-01 100.0% 72.5%
3265664 4336.1.1.0 alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like 0.54 48.0 4.14e-01 98.3% 63.3%