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MZ127825.1__UOK16651.1__HBKIJOIA_00050__00050
Bact-VirMZ127825.1__UOK16651.1__HBKIJOIA_00050__00050
Identity
- Accession:
- MZ127825 ↗
- Kingdom:
- phage
Quality
89.5
mean pLDDT
Taxonomy
TaxID: 2932851
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-49
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k4nA00 | 3.30.720.70 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.68 | 58.0 | 4.37e-01 | 100.0% | 74.8% |
| 2jl6101 | 2.20.150.30 | Mainly Beta › Single Sheet › putative 5-dehydro-2- deoxygluconokinase like fold › | 0.67 | 46.0 | 4.68e-01 | 72.7% | 93.0% |
| 4q52A00 | 2.60.40.3910 | Mainly Beta › Sandwich › Immunoglobulin-like › Inclusion body protein | 0.67 | 50.0 | 3.42e-01 | 86.4% | 73.7% |
| 8gjaD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 53.0 | 3.38e-01 | 100.0% | 85.6% |
| 4f0aB02 | 3.30.2460.20 | Alpha Beta › 2-Layer Sandwich › Endo-n-acetylneuraminidase fold › Wnt (Wingless and Int-1), C-terminal domain | 0.65 | 50.0 | 4.40e-01 | 86.4% | 88.2% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.64 | 48.0 | 3.03e-01 | 81.8% | 72.4% |
| 5eqjB02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.64 | 45.0 | 2.89e-01 | 81.8% | 14.5% |
| 1wq8A00 | 2.10.90.10 | Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines | 0.64 | 47.0 | 3.76e-01 | 84.1% | 46.5% |
| 1g0sA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.62 | 48.0 | 3.17e-01 | 88.6% | 55.7% |
| 8p97A01 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.60 | 48.0 | 2.74e-01 | 97.7% | 12.0% |
| 3icyA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.60 | 46.0 | 3.47e-01 | 97.7% | 33.1% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.57 | 38.0 | 3.80e-01 | 70.5% | 71.7% |
| 2r2dA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.57 | 47.0 | 2.94e-01 | 100.0% | 92.0% |
| 1ya5T01 | 2.20.160.10 | Mainly Beta › Single Sheet › titin filament fold › titin domain like | 0.56 | 42.0 | 3.53e-01 | 86.4% | 69.0% |
| 3iibA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.56 | 41.0 | 2.61e-01 | 88.6% | 76.4% |
| 2imjD01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 44.0 | 3.24e-01 | 100.0% | 55.6% |
| 8c5yA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 42.0 | 2.99e-01 | 100.0% | 35.9% |
| 4kwyA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.52 | 38.0 | 2.94e-01 | 93.2% | 36.5% |
| 4perB00 | 3.10.130.10 | Alpha Beta › Roll › P-30 Protein › Ribonuclease A-like domain | 0.52 | 39.0 | 3.23e-01 | 100.0% | 43.1% |
| 2d7vB00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.52 | 39.0 | 2.79e-01 | 88.6% | 41.2% |
| 3e23A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 37.0 | 2.43e-01 | 77.3% | 35.9% |
| 1ffyA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 37.0 | 2.28e-01 | 93.2% | 17.9% |
| 1cx8A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.51 | 39.0 | 2.52e-01 | 95.5% | 29.3% |
| 2n8xA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.51 | 34.0 | 2.44e-01 | 72.7% | 27.7% |
| 1accA02 | 2.60.120.240 | Mainly Beta › Sandwich › Jelly Rolls › Protective antigen, heptamerisation domain | 0.51 | 38.0 | 2.61e-01 | 86.4% | 54.5% |
| 3n4fA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 43.0 | 3.20e-01 | 97.7% | 36.2% |
| 3bf2A00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.51 | 38.0 | 2.91e-01 | 90.9% | 36.8% |
| 3pquA01 | 2.40.128.250 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 34.0 | 2.67e-01 | 75.0% | 58.0% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3212609 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.83 | 66.0 | 4.91e-01 | 88.6% | 71.8% |
| 4996027 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.83 | 55.0 | 3.36e-01 | 70.5% | 11.9% |
| 5020005 | 3604.1.1.0 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain | 0.75 | 58.0 | 4.83e-01 | 90.9% | 49.3% |
| 3840002 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.74 | 63.0 | 4.18e-01 | 97.7% | 65.6% |
| 5002369 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.72 | 61.0 | 4.59e-01 | 100.0% | 68.7% |
| 4187457 | 4967.1.1.6 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › Intron_maturas2 | 0.72 | 57.0 | 4.08e-01 | 88.6% | 75.4% |
| 3649132 | 109.4.1.888 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_Syf1_CNRKL1_N | 0.69 | 56.0 | 3.17e-01 | 95.5% | 13.2% |
| 4245552 | 67.1.1.1 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C | 0.67 | 54.0 | 4.36e-01 | 93.2% | 68.9% |
| 3662612 | 304.48.1.37 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_2 | 0.67 | 46.0 | 2.90e-01 | 72.7% | 12.3% |
| 3555682 | 109.4.1.1397 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_C, PF29376 | 0.65 | 51.0 | 2.85e-01 | 93.2% | 6.2% |
| 3872696 | 922.1.1.0 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat | 0.65 | 44.0 | 4.41e-01 | 93.2% | 68.9% |
| 3235779 | 109.4.1.890 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_Syf1_CNRKL1_C | 0.65 | 53.0 | 3.05e-01 | 97.7% | 15.5% |
| 4546371 | 220.1.1.219 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch | 0.64 | 49.0 | 3.66e-01 | 100.0% | 31.7% |
| 3928310 | 11.1.1.588 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fibulin_C | 0.64 | 46.0 | 3.71e-01 | 79.5% | 37.9% |
| 3268650 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.64 | 55.0 | 3.91e-01 | 100.0% | 52.9% |
| 3588825 | 2004.1.1.552 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T4SS-DNA_transf, TraG-D_C | 0.64 | 50.0 | 2.89e-01 | 93.2% | 14.5% |
| 3404839 | 385.1.1.0 ↗ | few secondary structure elements › Cystine-knot cytokines › Cystine-knot cytokines › Cystine-knot cytokines | 0.63 | 51.0 | 3.91e-01 | 97.7% | 84.3% |
| 3522698 | 385.1.1.11 ↗ | few secondary structure elements › Cystine-knot cytokines › Cystine-knot cytokines › Cystine-knot cytokines › IL17 | 0.63 | 46.0 | 3.47e-01 | 86.4% | 30.0% |
| 3997943 | 109.4.1.1580 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_N, HAT_PRP39_C | 0.62 | 51.0 | 2.83e-01 | 97.7% | 10.6% |
| 3533254 | 109.3.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 | 0.62 | 49.0 | 2.93e-01 | 90.9% | 19.1% |
| 3788481 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.62 | 45.0 | 2.63e-01 | 81.8% | 16.4% |
| 3734626 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.61 | 48.0 | 3.13e-01 | 90.9% | 44.5% |
| 5030350 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.61 | 42.0 | 3.05e-01 | 75.0% | 64.9% |
| 4159896 | 2003.1.1.59 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_5 | 0.59 | 46.0 | 2.75e-01 | 93.2% | 78.7% |
| 3641065 | 11.1.1.36 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Rho_GDI | 0.59 | 41.0 | 3.11e-01 | 77.3% | 31.2% |
| 5043905 | 3435.1.1.0 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC | 0.59 | 50.0 | 3.22e-01 | 100.0% | 41.8% |
| 5004937 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.58 | 43.0 | 2.75e-01 | 70.5% | 12.9% |
| 3226927 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.58 | 46.0 | 2.78e-01 | 88.6% | 13.7% |
| 5036652 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.58 | 42.0 | 3.54e-01 | 79.5% | 66.3% |
| 3389851 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.58 | 43.0 | 2.66e-01 | 81.8% | 22.0% |
| 4857423 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 40.0 | 3.27e-01 | 75.0% | 36.2% |
| 4073433 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.56 | 49.0 | 4.07e-01 | 100.0% | 62.5% |
| 4983372 | 304.48.1.20 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Thg1 | 0.56 | 45.0 | 2.84e-01 | 97.7% | 16.4% |
| 5021437 | 2.9.1.1 ↗ | beta barrels › OB-fold › RNB domain-like › RNB domain-like › RNB | 0.56 | 40.0 | 2.45e-01 | 77.3% | 10.2% |
| 4997962 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.56 | 46.0 | 2.90e-01 | 100.0% | 40.4% |
| 3422969 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.55 | 38.0 | 2.92e-01 | 90.9% | 26.9% |
| 3189438 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.55 | 44.0 | 2.69e-01 | 93.2% | 12.1% |
| 3691484 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.55 | 41.0 | 2.72e-01 | 88.6% | 86.5% |
| 5060116 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.55 | 43.0 | 3.39e-01 | 93.2% | 59.0% |
| 2390064 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.55 | 37.0 | 2.54e-01 | 84.1% | 16.6% |
| 4948553 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.55 | 40.0 | 2.61e-01 | 88.6% | 67.5% |
| 4820404 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.54 | 41.0 | 3.20e-01 | 90.9% | 70.9% |
| 5048757 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 44.0 | 3.27e-01 | 100.0% | 44.4% |
| 3511109 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.53 | 36.0 | 3.12e-01 | 75.0% | 88.2% |
| 5071965 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.52 | 34.0 | 2.82e-01 | 70.5% | 30.5% |
| 4190111 | 304.48.1.37 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_2 | 0.52 | 41.0 | 2.68e-01 | 100.0% | 46.0% |
| 3799726 | 922.1.1.7 ↗ | few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP1_ADAMTS | 0.52 | 42.0 | 3.00e-01 | 93.2% | 57.8% |
| 4938355 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.51 | 37.0 | 2.70e-01 | 84.1% | 33.1% |