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MZ147816.1__QVW54423.1__p113_1__00001

Bact-Vir

MZ147816.1__QVW54423.1__p113_1__00001

Identity

Accession:
MZ147816 ↗
Kingdom:
phage

Quality

83.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Herelleviridae› Schiekvirus› Enterococcus_phage_113

TaxID: 2835638

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-45
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5yrzA01 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.82 59.0 4.27e-01 75.6% 29.5%
1f35A00 2.60.120.390 Mainly Beta › Sandwich › Jelly Rolls › Olfactory marker 0.80 54.0 3.55e-01 70.7% 51.2%
3ooqA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.74 62.0 3.70e-01 95.1% 40.9%
4xcvA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 58.0 3.81e-01 100.0% 63.6%
2p9bA04 1.20.58.520 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Amidohydrolase 0.58 51.0 3.94e-01 100.0% 48.9%
4hasA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.56 47.0 3.43e-01 97.6% 35.6%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3742209 6140.1.1.0 ↗ alpha superhelices › Cdc45-Binding Domain in Sld3/Treslin › Cdc45-Binding Domain in Sld3/Treslin › Cdc45-Binding Domain in Sld3/Treslin 0.69 53.0 3.25e-01 82.9% 40.0%
3466452 2484.1.1.10 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TsaD 0.68 54.0 3.31e-01 90.2% 57.3%
4941316 3352.1.1.1 ↗ alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3 0.66 57.0 3.24e-01 100.0% 43.3%
3225673 5001.1.1.65 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Serpentine_r_xa 0.63 54.0 3.25e-01 100.0% 27.7%
4455003 7502.1.1.1 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.62 47.0 3.87e-01 100.0% 43.3%
3900202 6092.1.1.1 ↗ alpha bundles › Helical extension domain in Regulator of G-protein signaling 9 › Helical extension domain in Regulator of G-protein signaling 9 › Helical extension domain in Regulator of G-protein signaling 9 › RGS_DHEX 0.62 46.0 3.37e-01 80.5% 39.1%
3164257 2002.1.1.111 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI 0.60 52.0 3.14e-01 100.0% 40.7%
4608552 2003.4.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP 0.54 48.0 2.98e-01 100.0% 66.5%
3424393 170.2.1.0 ↗ alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein N-terminal domain › Retrovirus capsid protein N-terminal domain 0.51 47.0 3.54e-01 100.0% 46.7%
D2 high residues 64-110
PDB
Domain cluster: representative
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4jp0A03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.91 62.0 7.06e-01 70.2% 97.1%
2elhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 59.0 5.27e-01 74.5% 54.5%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 58.0 4.83e-01 76.6% 47.5%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 64.0 5.63e-01 87.2% 67.2%
4a0zA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 67.0 6.29e-01 100.0% 86.4%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.78 56.0 5.57e-01 76.6% 75.0%
3e7lA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 62.0 5.74e-01 89.4% 71.7%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 66.0 6.15e-01 95.7% 84.5%
4fcyA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 53.0 4.52e-01 76.6% 57.7%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 62.0 5.84e-01 93.6% 82.8%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.73 52.0 3.88e-01 78.7% 29.4%
2q0oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 61.0 5.48e-01 95.7% 73.1%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 5.56e-01 95.7% 79.4%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 58.0 5.37e-01 95.7% 92.1%
3iwfB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 58.0 4.85e-01 100.0% 76.4%
3lsgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 57.0 5.52e-01 95.7% 96.4%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 59.0 5.58e-01 95.7% 80.4%
4ivnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 56.0 4.98e-01 100.0% 77.6%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 56.0 5.16e-01 93.6% 92.1%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 57.0 4.92e-01 95.7% 63.2%
3mklA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 59.0 4.63e-01 100.0% 82.7%
4wcgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 54.0 5.10e-01 93.6% 90.2%
7ml0M01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.68 48.0 4.09e-01 76.6% 47.6%
2o3fA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 55.0 4.79e-01 100.0% 72.0%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 58.0 5.33e-01 100.0% 76.2%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 55.0 4.67e-01 93.6% 75.6%
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 46.0 4.13e-01 76.6% 59.2%
2x26A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.64 46.0 3.10e-01 76.6% 74.1%
2p8tA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 53.0 4.61e-01 93.6% 65.3%
2oi8A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 52.0 3.51e-01 100.0% 46.8%
4bxoA02 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.56 43.0 3.91e-01 87.2% 83.6%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3509240 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.92 66.0 5.78e-01 74.5% 53.8%
4596898 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.85 68.0 5.59e-01 85.1% 53.8%
4009103 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.85 68.0 6.27e-01 87.2% 71.7%
4963466 101.1.1.368 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.85 66.0 6.70e-01 85.1% 91.1%
4610234 101.1.2.89 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR 0.85 75.0 6.90e-01 100.0% 85.0%
4040211 101.1.2.89 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR 0.85 74.0 6.89e-01 100.0% 85.0%
4449179 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.84 74.0 6.88e-01 100.0% 85.0%
3985435 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.83 62.0 6.53e-01 80.9% 100.0%
3951829 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.83 59.0 4.84e-01 76.6% 44.7%
4612964 101.1.1.18 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.82 60.0 6.10e-01 78.7% 88.9%
4350602 101.1.8.14 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › UPF0175 0.81 62.0 5.54e-01 83.0% 63.1%
3324592 101.1.1.196 ↗ alpha arrays › HTH › HTH › Three-helical HTH › RWP-RK 0.80 63.0 6.65e-01 89.4% 100.0%
5074940 101.1.6.0 ↗ alpha arrays › HTH › HTH › TrpR 0.80 65.0 6.25e-01 91.5% 83.6%
3436375 101.1.2.459 ↗ alpha arrays › HTH › HTH › winged helix domain › RWP-RK 0.80 64.0 6.57e-01 89.4% 95.6%
3925034 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.76 56.0 5.40e-01 80.9% 72.7%
3312056 101.1.1.196 ↗ alpha arrays › HTH › HTH › Three-helical HTH › RWP-RK 0.75 64.0 6.56e-01 97.9% 100.0%
3287303 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.75 65.0 5.07e-01 100.0% 84.8%
3289244 101.1.1.58 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.75 61.0 5.68e-01 100.0% 90.8%
3463281 101.1.1.196 ↗ alpha arrays › HTH › HTH › Three-helical HTH › RWP-RK 0.74 65.0 5.89e-01 100.0% 76.9%
4151588 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.73 59.0 5.84e-01 89.4% 98.0%
3603167 101.1.1.17 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.72 63.0 5.66e-01 100.0% 73.8%
None — 0.71 63.0 4.92e-01 100.0% 84.0%
4008316 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.71 56.0 5.40e-01 89.4% 85.5%
5038587 101.1.6.12 ↗ alpha arrays › HTH › HTH › TrpR › HTH_23 0.70 53.0 4.94e-01 87.2% 65.0%
3956134 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.70 59.0 5.66e-01 97.9% 96.4%
3977556 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.69 59.0 5.68e-01 97.9% 96.4%
3967101 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.68 57.0 5.49e-01 95.7% 92.7%
2555 101.1.1.11 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_6 0.68 58.0 4.82e-01 95.7% 61.4%
3282193 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.67 56.0 5.51e-01 95.7% 100.0%