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MZ150783.1__QWY83854.1__SEA_A3WALLY_4__00004
Bact-VirMZ150783.1__QWY83854.1__SEA_A3WALLY_4__00004
Identity
- Accession:
- MZ150783 ↗
- Kingdom:
- phage
Quality
91.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-153
Domain cluster:
rep: OR420741.1__WOZ55670.1__CRP118_gp39__00039__D1-140
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05257.23 best | CHAP | 27.9 | 3.70e-06 | 60.1% | 46.9% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k3aA01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.75 | 49.0 | 5.88e-01 | 75.7% | 97.0% |
| 4cshA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.70 | 66.0 | 6.34e-01 | 100.0% | 96.3% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 29.0 | 4.58e-01 | 98.0% | 96.9% |
| 2egcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 30.0 | 4.17e-01 | 100.0% | 85.3% |
| 3pe0A03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 25.0 | 3.72e-01 | 98.0% | 82.8% |
| 3ntkA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 33.0 | 4.20e-01 | 81.8% | 90.0% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 28.0 | 4.09e-01 | 83.1% | 92.6% |
| 1v1cA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 28.0 | 4.07e-01 | 98.0% | 95.6% |
| 1cv8A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.54 | 48.0 | 4.60e-01 | 98.0% | 96.0% |
| 2btwA00 | 3.90.70.30 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Phytochelatin synthase, N-terminal domain | 0.53 | 47.0 | 4.20e-01 | 98.0% | 87.6% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4031159 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.73 | 57.0 | 5.67e-01 | 95.3% | 78.6% |
| 3702924 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.67 | 59.0 | 5.18e-01 | 93.9% | 91.2% |
| 4218488 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.66 | 30.0 | 4.13e-01 | 100.0% | 81.2% |
| 3512419 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.66 | 30.0 | 4.01e-01 | 100.0% | 77.6% |
| 2990058 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.65 | 61.0 | 4.97e-01 | 100.0% | 66.9% |
| 3566631 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.65 | 30.0 | 4.12e-01 | 100.0% | 83.7% |
| 3535298 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.64 | 35.0 | 4.32e-01 | 84.5% | 86.7% |
| 3879132 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.64 | 29.0 | 4.14e-01 | 98.6% | 88.0% |
| 4960783 | 219.1.1.63 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › TGL | 0.61 | 57.0 | 4.82e-01 | 100.0% | 84.9% |
| 3707929 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 32.0 | 3.15e-01 | 98.6% | 46.9% |
| 4483091 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.59 | 30.0 | 3.60e-01 | 94.6% | 70.5% |
| 3171604 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.59 | 29.0 | 4.14e-01 | 94.6% | 96.0% |
| 5033672 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.53 | 44.0 | 4.09e-01 | 91.2% | 95.4% |
| 3302391 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.52 | 40.0 | 4.10e-01 | 99.3% | 83.6% |
| 3624228 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.52 | 27.0 | 3.77e-01 | 97.3% | 100.0% |
| 4186848 | 5.1.4.66 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › AUDH_beta_propeller | 0.51 | 40.0 | 2.99e-01 | 85.1% | 87.8% |
D2
high
residues 173-244
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g54A02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.85 | 76.0 | 7.64e-01 | 100.0% | 94.4% |
| 4bolA02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.85 | 69.0 | 6.65e-01 | 100.0% | 77.5% |
| 4c2dA02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.82 | 75.0 | 7.04e-01 | 100.0% | 82.4% |
| 3d2yA02 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.79 | 62.0 | 5.86e-01 | 100.0% | 71.4% |
| 1eakA01 | 1.10.101.10 | Mainly Alpha › Orthogonal Bundle › Muramoyl-pentapeptide Carboxypeptidase; domain 1 › PGBD-like superfamily/PGBD | 0.79 | 59.0 | 6.25e-01 | 83.3% | 90.5% |
| 2yfvA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.66 | 35.0 | 3.68e-01 | 76.4% | 55.9% |
| 3mfnB00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.60 | 54.0 | 4.49e-01 | 100.0% | 88.9% |
| 7wf8B01 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.60 | 42.0 | 3.58e-01 | 73.6% | 52.9% |
| 4unfA01 | 1.10.1670.10 | Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.59 | 52.0 | 4.38e-01 | 97.2% | 84.9% |
| 2khmA01 | 1.10.10.1350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain | 0.58 | 40.0 | 3.49e-01 | 84.7% | 47.2% |
| 5nl7A02 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.58 | 49.0 | 4.34e-01 | 100.0% | 73.0% |
| 4jlxA01 | 1.10.1410.40 | Mainly Alpha › Orthogonal Bundle › Poly(a)-polymerase, middle domain › | 0.57 | 49.0 | 3.67e-01 | 97.2% | 98.9% |
| 2abkA02 | 1.10.1670.10 | Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.56 | 38.0 | 3.51e-01 | 81.9% | 52.5% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4117418 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.90 | 69.0 | 7.55e-01 | 81.9% | 96.7% |
| 4312892 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.86 | 68.0 | 7.43e-01 | 88.9% | 100.0% |
| 4380775 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.86 | 68.0 | 4.77e-01 | 88.9% | 30.0% |
| 1086899 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.83 | 68.0 | 6.66e-01 | 100.0% | 80.8% |
| 1165079 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.82 | 75.0 | 6.70e-01 | 100.0% | 72.9% |
| 1877329 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.82 | 67.0 | 6.60e-01 | 97.2% | 82.9% |
| 1904136 | 144.1.1.0 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like | 0.81 | 66.0 | 6.49e-01 | 97.2% | 82.7% |
| 3263339 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.79 | 74.0 | 7.34e-01 | 100.0% | 97.3% |
| 3987122 | 144.1.1.1 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 | 0.79 | 66.0 | 6.37e-01 | 100.0% | 80.0% |
| 365480 | 144.1.1.0 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like | 0.79 | 62.0 | 5.91e-01 | 100.0% | 73.2% |
| 3060287 | 144.1.1.0 ↗ | alpha arrays › PGBD-like › PGBD-like › PGBD-like | 0.78 | 63.0 | 6.24e-01 | 100.0% | 84.0% |
| 5081640 | 235.1.1.45 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glyco_hydro_108 | 0.75 | 61.0 | 4.49e-01 | 100.0% | 35.0% |
| 3165359 | 105.1.1.0 ↗ | alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain | 0.63 | 52.0 | 4.70e-01 | 93.1% | 68.0% |
| 3872053 | 193.1.1.10 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › TEDC1 | 0.59 | 50.0 | 4.08e-01 | 100.0% | 56.7% |
| 3236857 | 193.1.1.1 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › CH | 0.59 | 51.0 | 4.23e-01 | 100.0% | 89.6% |
| 3925872 | 5001.1.1.33 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srh | 0.55 | 45.0 | 2.95e-01 | 90.3% | 62.7% |
| 3802087 | 108.1.1.99 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 | 0.52 | 45.0 | 3.29e-01 | 95.8% | 43.1% |