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MZ150783.1__QWY83863.1__SEA_A3WALLY_13__00013
Bact-VirMZ150783.1__QWY83863.1__SEA_A3WALLY_13__00013
Identity
- Accession:
- MZ150783 ↗
- Kingdom:
- phage
Quality
74.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-25
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1b35B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 43.0 | 2.57e-01 | 84.0% | 8.2% |
| 3dmgA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 39.0 | 2.53e-01 | 92.0% | 26.0% |
| 1np6A02 | 2.20.25.120 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.59 | 38.0 | 3.90e-01 | 72.0% | 66.7% |
| 1zcdA00 | 1.20.1530.10 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain | 0.58 | 40.0 | 2.36e-01 | 100.0% | 64.1% |
| 3euoA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.58 | 38.0 | 2.54e-01 | 84.0% | 14.0% |
| 2yxdA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 42.0 | 2.71e-01 | 96.0% | 18.4% |
| 7kw0A02 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.58 | 39.0 | 2.64e-01 | 100.0% | 39.3% |
| 1o54A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 38.0 | 2.43e-01 | 84.0% | 35.2% |
| 4kdyB01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.57 | 42.0 | 3.18e-01 | 88.0% | 77.5% |
| 3l60A01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.56 | 36.0 | 2.25e-01 | 88.0% | 10.5% |
| 2yvlA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 39.0 | 2.49e-01 | 80.0% | 34.9% |
| 1tedA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.55 | 37.0 | 2.51e-01 | 84.0% | 17.4% |
| 3mb5A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 41.0 | 2.62e-01 | 100.0% | 25.4% |
| 7yj5A02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.53 | 33.0 | 2.30e-01 | 88.0% | 16.8% |
| 3df8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 38.0 | 2.70e-01 | 100.0% | 70.6% |
| 3v7iA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.53 | 32.0 | 2.31e-01 | 92.0% | 16.3% |
| 3lhoA01 | 3.10.180.50 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › | 0.53 | 33.0 | 2.14e-01 | 100.0% | 21.8% |
| 1ckeA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 35.0 | 2.21e-01 | 84.0% | 10.8% |
| 2sliA03 | 2.40.220.10 | Mainly Beta › Beta Barrel › Intramolecular trans-sialidase; domain 3 › Intramolecular Trans-sialidase; Domain 3 | 0.52 | 36.0 | 2.67e-01 | 100.0% | 21.0% |
| 4ijaA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 34.0 | 2.38e-01 | 100.0% | 34.7% |
| 7chkB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 37.0 | 2.58e-01 | 84.0% | 78.0% |
| 1cl8A00 | 3.40.580.10 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RI Endonuclease; Chain A › Eco RI Endonuclease, subunit A | 0.51 | 34.0 | 2.12e-01 | 96.0% | 76.2% |
| 2wpvE00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 37.0 | 2.17e-01 | 72.0% | 6.4% |
| 1r61A00 | 3.50.30.50 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › Putative cyclase | 0.51 | 34.0 | 2.20e-01 | 92.0% | 11.2% |
| 3dxqA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 37.0 | 2.78e-01 | 76.0% | 59.0% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3466238 | 206.1.1.14 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › ABC1 | 0.88 | 69.0 | 3.76e-01 | 100.0% | 6.0% |
| 5007497 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.64 | 45.0 | 2.66e-01 | 96.0% | 69.3% |
| 4929832 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.64 | 44.0 | 3.15e-01 | 92.0% | 22.1% |
| 3581606 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 43.0 | 2.66e-01 | 76.0% | 10.5% |
| 3793482 | 7036.1.1.1 ↗ | beta barrels › N-terminal domain of TAP-binding protein-related › N-terminal domain of TAP-binding protein-related › N-terminal domain of TAP-binding protein-related › I-set | 0.60 | 40.0 | 2.82e-01 | 100.0% | 19.2% |
| 4350136 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.56 | 41.0 | 2.44e-01 | 92.0% | 11.0% |
| 4142311 | 109.4.1.1297 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIMELESS, PF27570 | 0.56 | 39.0 | 2.13e-01 | 92.0% | 3.8% |
| 4877165 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.56 | 39.0 | 2.54e-01 | 100.0% | 15.3% |
| 4414670 | 102.1.1.79 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 | 0.55 | 40.0 | 2.39e-01 | 96.0% | 10.9% |
| 3962879 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.55 | 42.0 | 2.57e-01 | 100.0% | 13.2% |
| 4110276 | 1.1.3.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › SymE_toxin | 0.55 | 39.0 | 3.12e-01 | 76.0% | 28.6% |
| 3168940 | 109.4.1.64 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › GET4 | 0.55 | 38.0 | 2.20e-01 | 72.0% | 5.8% |
| 3329843 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.54 | 38.0 | 2.32e-01 | 96.0% | 15.8% |
| 3313040 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.54 | 35.0 | 2.29e-01 | 100.0% | 42.0% |
| 3787847 | 109.4.1.2220 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30130 | 0.53 | 43.0 | 2.27e-01 | 80.0% | 1.7% |
| 3989573 | 601.14.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin | 0.53 | 42.0 | 2.53e-01 | 76.0% | 8.8% |
| 4967269 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.52 | 35.0 | 3.12e-01 | 76.0% | 34.5% |
| 4231650 | 377.2.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › C-terminal, Zn-finger domain of MutM-like DNA repair proteins › C-terminal, Zn-finger domain of MutM-like DNA repair proteins › zf-FPG_IleRS | 0.50 | 35.0 | 3.20e-01 | 84.0% | 44.0% |