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MZ188976.1__QVJ82392.1__JK004_35__00035
Bact-VirMZ188976.1__QVJ82392.1__JK004_35__00035
Identity
- Accession:
- MZ188976 ↗
- Kingdom:
- phage
Quality
96.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-78
Domain cluster:
rep: S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00026__D5-77
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 44.0 | 4.91e-01 | 81.3% | 94.8% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.62 | 42.0 | 4.16e-01 | 70.7% | 100.0% |
| 1ynbA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.61 | 50.0 | 3.93e-01 | 92.0% | 89.8% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 43.0 | 4.20e-01 | 74.7% | 80.5% |
| 3uoeA01 | 1.10.1530.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel | 0.60 | 47.0 | 4.54e-01 | 85.3% | 93.1% |
| 3wvoC02 | 1.10.132.100 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.59 | 45.0 | 3.78e-01 | 81.3% | 93.1% |
| 2ahoB02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.56 | 44.0 | 4.16e-01 | 85.3% | 94.5% |
| 2a19A02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.55 | 40.0 | 3.87e-01 | 78.7% | 91.8% |
| 5dvwA00 | 1.20.120.1160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.54 | 41.0 | 3.47e-01 | 82.7% | 72.0% |
| 2da4A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.53 | 33.0 | 3.56e-01 | 80.0% | 72.7% |
| 2lhjA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.52 | 31.0 | 3.13e-01 | 72.0% | 55.0% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5048108 | 102.3.1.1 ↗ | alpha arrays › HhH/H2TH › eIF2alpha middle domain › eIF2alpha middle domain › EIF_2_alpha | 0.66 | 45.0 | 4.24e-01 | 70.7% | 91.1% |
| 3050 | 102.3.1.1 ↗ | alpha arrays › HhH/H2TH › eIF2alpha middle domain › eIF2alpha middle domain › EIF_2_alpha | 0.62 | 44.0 | 4.15e-01 | 74.7% | 92.3% |
| 5031563 | 102.3.1.1 ↗ | alpha arrays › HhH/H2TH › eIF2alpha middle domain › eIF2alpha middle domain › EIF_2_alpha | 0.62 | 44.0 | 4.31e-01 | 76.0% | 98.8% |
| 5029208 | 102.3.1.1 ↗ | alpha arrays › HhH/H2TH › eIF2alpha middle domain › eIF2alpha middle domain › EIF_2_alpha | 0.61 | 44.0 | 4.27e-01 | 77.3% | 98.8% |
| 3295940 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.58 | 39.0 | 4.40e-01 | 97.3% | 94.5% |
| 5050879 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.56 | 41.0 | 3.52e-01 | 81.3% | 49.6% |
| 5042174 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.56 | 41.0 | 3.48e-01 | 81.3% | 48.9% |
| 4020387 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.56 | 40.0 | 2.52e-01 | 76.0% | 85.7% |
| 5079223 | 183.1.1.1 ↗ | alpha duplicates or obligate multimers › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Iron-dependent repressor protein, dimerization domain › Fe_dep_repr_C | 0.55 | 46.0 | 3.70e-01 | 92.0% | 90.3% |
| 4934727 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.54 | 41.0 | 3.84e-01 | 84.0% | 94.7% |
| 5077837 | 304.139.1.1 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › DevR | 0.54 | 43.0 | 2.95e-01 | 88.0% | 51.3% |
| 3728038 | 7524.1.1.1 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh | 0.53 | 43.0 | 3.22e-01 | 85.3% | 55.0% |
| 3991441 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.53 | 36.0 | 3.42e-01 | 70.7% | 58.9% |
| 3720888 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.53 | 38.0 | 3.86e-01 | 85.3% | 78.7% |
| None | — | 0.50 | 41.0 | 2.64e-01 | 89.3% | 20.5% |