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MZ188976.1__QVJ82402.1__JK004_45__00045
Bact-VirMZ188976.1__QVJ82402.1__JK004_45__00045
Identity
- Accession:
- MZ188976 ↗
- Kingdom:
- phage
Quality
92.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 24-90
Domain cluster:
rep: NC_031129.1__YP_009293540.1__BI168_gp083__00083__D20-86
D2
medium
residues 93-132
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7vd7A01 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.65 | 48.0 | 3.79e-01 | 82.5% | 41.3% |
| 6ro0F00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 47.0 | 3.69e-01 | 82.5% | 96.9% |
| 3fdjA03 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.65 | 53.0 | 3.85e-01 | 100.0% | 45.3% |
| 2wmcA00 | 3.30.760.10 | Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e | 0.64 | 47.0 | 3.19e-01 | 85.0% | 23.6% |
| 3nyiA02 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.63 | 50.0 | 3.63e-01 | 100.0% | 69.3% |
| 1gsaA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 48.0 | 3.49e-01 | 90.0% | 35.9% |
| 4gl6A01 | 3.10.450.570 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Domain of unknown function (DUF5037), N-terminal subdomain | 0.60 | 41.0 | 3.46e-01 | 77.5% | 48.8% |
| 2v5gA00 | 3.40.1690.10 | Alpha Beta › 3-Layer(aba) Sandwich › name from scop › secretion proteins EscU | 0.58 | 46.0 | 3.48e-01 | 100.0% | 35.8% |
| 3zjyC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 48.0 | 4.04e-01 | 100.0% | 91.9% |
| 7tuvA02 | 2.40.50.700 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 45.0 | 3.80e-01 | 100.0% | 100.0% |
| 1vdhA01 | 3.30.70.1030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 | 0.55 | 42.0 | 3.05e-01 | 85.0% | 65.3% |
| 1cfyA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.55 | 42.0 | 3.09e-01 | 92.5% | 33.1% |
| 7wrgB01 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.54 | 42.0 | 2.57e-01 | 92.5% | 35.0% |
| 1hqz800 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.54 | 44.0 | 3.18e-01 | 95.0% | 79.5% |
| 2g7hA01 | 3.30.160.460 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 38.0 | 3.41e-01 | 100.0% | 47.4% |
| 1gccA00 | 3.30.730.10 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › AP2/ERF domain | 0.52 | 39.0 | 3.65e-01 | 100.0% | 88.9% |
| 3kenA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.52 | 38.0 | 2.42e-01 | 100.0% | 84.4% |
| 4lizA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.51 | 41.0 | 2.98e-01 | 95.0% | 81.9% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5044314 | 3203.1.1.0 ↗ | a+b two layers › Putative oxidoreductase › Putative oxidoreductase › Putative oxidoreductase | 0.76 | 66.0 | 5.10e-01 | 100.0% | 84.4% |
| 3716118 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.75 | 53.0 | 3.17e-01 | 82.5% | 10.2% |
| 4046344 | 2.1.1.73 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgA_N | 0.75 | 54.0 | 4.46e-01 | 77.5% | 98.6% |
| 3250882 | 220.1.1.199 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_NISCH_C | 0.70 | 58.0 | 4.04e-01 | 100.0% | 51.4% |
| 3166135 | 4312.1.1.4 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 | 0.65 | 52.0 | 4.18e-01 | 100.0% | 43.2% |
| 3281041 | 301.13.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV | 0.65 | 55.0 | 3.89e-01 | 100.0% | 43.1% |
| 4144852 | 220.1.1.126 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ycf4 | 0.64 | 52.0 | 3.96e-01 | 100.0% | 38.9% |
| 4371107 | 2.1.1.11 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a | 0.63 | 51.0 | 3.88e-01 | 97.5% | 71.4% |
| 3233742 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 51.0 | 4.05e-01 | 100.0% | 86.7% |
| 3327654 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.59 | 49.0 | 4.12e-01 | 100.0% | 76.0% |
| 3811650 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.59 | 38.0 | 4.17e-01 | 72.5% | 83.3% |
| 3457412 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.59 | 47.0 | 2.98e-01 | 100.0% | 99.3% |
| 4190134 | 4104.1.1.1 ↗ | beta sandwiches › EscU C-terminal domain-like › EscU C-terminal domain-like › EscU C-terminal domain-like › Bac_export_2 | 0.58 | 47.0 | 3.89e-01 | 100.0% | 49.4% |
| 3997788 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 42.0 | 3.53e-01 | 77.5% | 84.0% |
| 351874 | 4104.1.1.1 ↗ | beta sandwiches › EscU C-terminal domain-like › EscU C-terminal domain-like › EscU C-terminal domain-like › Bac_export_2 | 0.58 | 45.0 | 3.45e-01 | 100.0% | 35.2% |
| 4042308 | 2003.1.10.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › GSH-S_N | 0.58 | 43.0 | 3.27e-01 | 92.5% | 36.8% |
| 340177 | 4104.1.1.1 ↗ | beta sandwiches › EscU C-terminal domain-like › EscU C-terminal domain-like › EscU C-terminal domain-like › Bac_export_2 | 0.58 | 47.0 | 3.76e-01 | 100.0% | 45.7% |
| 3390301 | 5.1.4.102 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_3 | 0.57 | 45.0 | 2.77e-01 | 97.5% | 22.0% |
| 3967804 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.56 | 40.0 | 3.06e-01 | 77.5% | 41.9% |
| 4025059 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.55 | 43.0 | 3.02e-01 | 100.0% | 81.2% |
| 4397441 | 3222.1.1.1 ↗ | a+b complex topology › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › Regulatory domain of isocitrate dehydrogenase kinase/phosphatase › AceK_regulatory | 0.55 | 40.0 | 2.52e-01 | 92.5% | 16.5% |
| 3740216 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.54 | 44.0 | 3.14e-01 | 92.5% | 76.3% |