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MZ188976.1__QVJ82405.1__JK004_48__00048
Bact-VirMZ188976.1__QVJ82405.1__JK004_48__00048
Identity
- Accession:
- MZ188976 ↗
- Kingdom:
- phage
Quality
96.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-100
Domain cluster:
rep: NC_049923.1__YP_009908283.1__H3H28_gp14__00012__D2-90
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09907.16 best | HigB_toxin | 86.2 | 2.00e-24 | 76.8% | 97.3% |
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kheA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.74 | 61.0 | 6.38e-01 | 94.9% | 96.6% |
| 1wmiA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.74 | 60.0 | 6.31e-01 | 91.9% | 96.6% |
| 3g5oC00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.73 | 55.0 | 5.86e-01 | 88.9% | 90.8% |
| 2kc8A00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.70 | 55.0 | 5.61e-01 | 92.9% | 87.4% |
| 2otrA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.66 | 54.0 | 5.60e-01 | 90.9% | 96.7% |
| 1dbzA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.61 | 48.0 | 3.95e-01 | 85.9% | 74.5% |
| 2gq1A01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.58 | 46.0 | 3.93e-01 | 87.9% | 88.8% |
| 7vd7A01 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.58 | 45.0 | 4.69e-01 | 91.9% | 91.3% |
| 3cjmA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.57 | 49.0 | 3.72e-01 | 98.0% | 83.1% |
| 8eg0B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 41.0 | 2.82e-01 | 76.8% | 31.4% |
| 2aq5A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 41.0 | 2.83e-01 | 76.8% | 32.5% |
| 4g56D00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 42.0 | 2.96e-01 | 78.8% | 34.7% |
| 3hfqA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 43.0 | 2.95e-01 | 80.8% | 41.5% |
| 3lp9A00 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.55 | 43.0 | 3.21e-01 | 80.8% | 40.1% |
| 4zovB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 41.0 | 2.76e-01 | 76.8% | 42.9% |
| 6igbA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 42.0 | 2.87e-01 | 80.8% | 39.9% |
| 5c2vB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 41.0 | 2.81e-01 | 80.8% | 37.8% |
| 4jglA00 | 2.40.128.530 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 39.0 | 3.38e-01 | 75.8% | 94.7% |
| 1ri6A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 40.0 | 2.80e-01 | 79.8% | 48.6% |
| 6eugA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 47.0 | 3.26e-01 | 99.0% | 57.6% |
| 4h5iB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 40.0 | 2.76e-01 | 80.8% | 45.8% |
| 3h27A00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.52 | 46.0 | 3.07e-01 | 100.0% | 97.0% |
| 3tc9A02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 38.0 | 2.69e-01 | 76.8% | 39.3% |
| 3sreA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 46.0 | 3.16e-01 | 96.0% | 34.0% |
| 5gtqA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 39.0 | 2.83e-01 | 81.8% | 35.5% |
| 1v61A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 44.0 | 4.04e-01 | 100.0% | 71.2% |
| 7bysA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 44.0 | 3.20e-01 | 97.0% | 94.0% |
| 7x36A01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.51 | 40.0 | 2.92e-01 | 87.9% | 97.5% |
| 5m8cB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 36.0 | 2.53e-01 | 72.7% | 34.3% |
| 1x53A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 37.0 | 3.39e-01 | 89.9% | 58.0% |
| 1uypA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.50 | 37.0 | 2.73e-01 | 77.8% | 47.0% |
| 2p4oA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.50 | 37.0 | 2.65e-01 | 76.8% | 37.3% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2706250 | 4312.1.1.7 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › HigB_toxin | 0.98 | 95.0 | 9.28e-01 | 100.0% | 95.2% |
| 5082625 | 4312.1.1.7 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › HigB_toxin | 0.96 | 83.0 | 8.75e-01 | 92.9% | 98.9% |
| 5014147 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.83 | 64.0 | 7.07e-01 | 89.9% | 100.0% |
| 4967722 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.82 | 64.0 | 7.02e-01 | 92.9% | 100.0% |
| 5071213 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.80 | 60.0 | 6.61e-01 | 87.9% | 96.2% |
| 3602698 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.80 | 63.0 | 6.73e-01 | 91.9% | 96.5% |
| 4968316 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.80 | 61.0 | 6.49e-01 | 88.9% | 90.9% |
| 5029202 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.79 | 62.0 | 6.64e-01 | 94.9% | 95.3% |
| 4950220 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.79 | 66.0 | 6.90e-01 | 93.9% | 96.7% |
| 4928181 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.79 | 63.0 | 6.71e-01 | 98.0% | 96.5% |
| 4999510 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.79 | 62.0 | 6.67e-01 | 93.9% | 96.5% |
| 4941220 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.79 | 59.0 | 6.44e-01 | 89.9% | 96.2% |
| 5007064 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.78 | 55.0 | 6.21e-01 | 87.9% | 97.3% |
| 5029836 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.77 | 58.0 | 6.36e-01 | 92.9% | 97.5% |
| 4927100 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.77 | 64.0 | 6.69e-01 | 87.9% | 97.8% |
| 4966674 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.77 | 61.0 | 6.49e-01 | 98.0% | 97.6% |
| 5080427 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.76 | 56.0 | 6.11e-01 | 88.9% | 95.0% |
| 4984297 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.76 | 60.0 | 6.25e-01 | 91.9% | 91.1% |
| 4948982 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.76 | 62.0 | 6.50e-01 | 92.9% | 96.7% |
| 5018720 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.75 | 59.0 | 6.31e-01 | 90.9% | 96.5% |
| 5005256 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.75 | 59.0 | 6.29e-01 | 91.9% | 96.5% |
| 138730 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.74 | 61.0 | 6.38e-01 | 94.9% | 96.6% |
| 4968774 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.74 | 54.0 | 6.08e-01 | 86.9% | 100.0% |
| 4937462 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.73 | 63.0 | 6.46e-01 | 94.9% | 96.8% |
| 4937737 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.70 | 55.0 | 5.93e-01 | 88.9% | 97.6% |
| 3604507 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.70 | 59.0 | 6.12e-01 | 100.0% | 97.9% |
| 5078519 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.70 | 60.0 | 6.17e-01 | 92.9% | 97.9% |
| 134040 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.70 | 55.0 | 5.61e-01 | 92.9% | 87.4% |
| 4363733 | 4312.1.1.13 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › Toxin_YhaV | 0.69 | 63.0 | 5.51e-01 | 100.0% | 86.9% |
| 5052823 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.68 | 59.0 | 6.08e-01 | 97.0% | 97.9% |
| 4951171 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.68 | 46.0 | 5.33e-01 | 70.7% | 100.0% |
| 5030390 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.67 | 48.0 | 5.03e-01 | 91.9% | 84.3% |
| 166546 | 4312.1.1.10 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › YafQ_toxin | 0.66 | 54.0 | 5.60e-01 | 90.9% | 96.7% |
| 3972934 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.63 | 55.0 | 5.41e-01 | 97.0% | 96.2% |
| 3944258 | 234.3.1.0 ↗ | a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain | 0.58 | 47.0 | 4.73e-01 | 88.9% | 100.0% |
| 3765357 | 5.1.4.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,DUF1899,WD40_4 | 0.57 | 42.0 | 2.79e-01 | 76.8% | 78.3% |
| 3300728 | 5.1.4.24 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › SBP56 | 0.57 | 43.0 | 2.77e-01 | 79.8% | 28.0% |
| 4566539 | 5.1.4.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,DUF1899,WD40_4 | 0.57 | 42.0 | 2.77e-01 | 76.8% | 77.3% |
| 3735233 | 5.1.3.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase | 0.56 | 45.0 | 3.02e-01 | 84.8% | 83.9% |
| 3396994 | 5.1.4.382 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, DUF1899, ANAPC4_WD40, WD40_4 | 0.56 | 40.0 | 2.68e-01 | 74.7% | 78.0% |
| 3698170 | 5.1.3.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase | 0.56 | 45.0 | 3.03e-01 | 87.9% | 85.8% |
| 3723616 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.55 | 42.0 | 2.76e-01 | 79.8% | 31.2% |
| 3906634 | 5.1.4.382 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, DUF1899, ANAPC4_WD40, WD40_4 | 0.55 | 41.0 | 2.70e-01 | 76.8% | 28.2% |
| 4563304 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.55 | 41.0 | 2.87e-01 | 79.8% | 34.5% |
| 3298666 | 109.54.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › Utp12 | 0.54 | 40.0 | 2.56e-01 | 77.8% | 62.5% |
| 3242246 | 5.1.3.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase | 0.54 | 43.0 | 2.96e-01 | 84.8% | 80.2% |
| 3224224 | 4059.1.1.0 ↗ | a+b complex topology › Serpins › Serpins › Serpins | 0.54 | 45.0 | 2.90e-01 | 90.9% | 85.3% |
| 3409624 | 5.1.4.32 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N | 0.54 | 39.0 | 2.53e-01 | 75.8% | 28.0% |
| 3198523 | 5.1.3.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase | 0.53 | 41.0 | 2.73e-01 | 81.8% | 37.3% |
| 3541838 | 5.1.4.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,DUF1899,WD40_4 | 0.53 | 43.0 | 2.51e-01 | 86.9% | 67.6% |
| 3322985 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.52 | 38.0 | 2.55e-01 | 75.8% | 26.7% |
| 3740435 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.52 | 39.0 | 2.71e-01 | 79.8% | 25.6% |
| 3801015 | 5.1.4.94 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Det1 | 0.51 | 45.0 | 2.93e-01 | 100.0% | 24.2% |
| 3183932 | 5.1.2.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_32N | 0.50 | 37.0 | 2.65e-01 | 77.8% | 44.1% |