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MZ188976.1__QVJ82434.1__JK004_77__00077

Bact-Vir

MZ188976.1__QVJ82434.1__JK004_77__00077

Identity

Accession:
MZ188976 ↗
Kingdom:
phage

Quality

65.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 332-380
PDB
Domain cluster: representative
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2nmlA00 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.70 48.0 3.82e-01 73.5% 70.0%
1cbfA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.68 59.0 4.47e-01 100.0% 52.9%
3i4tA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.67 57.0 4.17e-01 100.0% 52.7%
1s4dE02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.66 56.0 4.15e-01 100.0% 46.0%
1vhvA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.65 55.0 4.07e-01 100.0% 47.5%
2bb3A02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.65 56.0 4.68e-01 100.0% 55.1%
6dgiA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.65 54.0 4.96e-01 100.0% 94.1%
1pjqB05 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.64 54.0 4.13e-01 100.0% 49.2%
3tqtA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.64 54.0 4.98e-01 100.0% 91.2%
6ijfC01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.64 53.0 4.48e-01 100.0% 60.2%
1a9xA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.64 53.0 4.87e-01 100.0% 88.6%
5iqlA00 2.60.40.1970 Mainly Beta › Sandwich › Immunoglobulin-like › YEATS domain 0.64 50.0 3.79e-01 91.8% 63.1%
1auvA01 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.63 55.0 5.19e-01 100.0% 95.0%
1va0B02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.63 53.0 4.07e-01 100.0% 50.0%
3h20A01 3.30.1490.240 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain 0.63 52.0 4.76e-01 93.9% 86.4%
3ethA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.63 53.0 4.96e-01 100.0% 91.9%
3vpbA02 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.62 51.0 4.74e-01 100.0% 92.8%
5zctA02 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.62 53.0 4.88e-01 100.0% 92.4%
2i87A03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.62 51.0 4.65e-01 100.0% 91.8%
1n26A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 49.0 4.26e-01 89.8% 66.7%
2zvbA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.62 51.0 3.90e-01 100.0% 51.6%
2pvpA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.61 50.0 4.75e-01 100.0% 95.3%
3ndcA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.61 51.0 3.93e-01 100.0% 50.4%
1wyzA02 3.30.950.10 Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain 0.61 51.0 4.06e-01 100.0% 53.6%
3orqA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.61 50.0 4.72e-01 100.0% 93.7%
3k8uA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.60 50.0 3.79e-01 100.0% 53.4%
1gsaA03 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.60 49.0 4.63e-01 100.0% 93.8%
1twfA03 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.59 48.0 4.01e-01 100.0% 81.2%
2i0kA02 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.59 49.0 3.76e-01 100.0% 84.9%
3hvnA01 3.90.840.10 Alpha Beta › Alpha-Beta Complex › HIV-1 Reverse Transcriptase; Chain A, domain 3 › Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain 0.58 47.0 3.33e-01 93.9% 55.2%
3g7dA03 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 49.0 3.74e-01 100.0% 74.2%
5zwzA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 43.0 4.03e-01 95.9% 97.1%
3vx8A02 3.40.140.70 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Ubiquitin-like modifier-activating enzyme ATG7 N-terminal domain 0.55 42.0 2.93e-01 83.7% 87.8%
4akmB00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.53 37.0 2.77e-01 79.6% 81.5%
4fcaA01 2.60.120.1250 Mainly Beta › Sandwich › Jelly Rolls › Peptidase M60, enhancin-like domain 1 0.52 41.0 3.39e-01 100.0% 54.1%
1owqA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.51 35.0 3.19e-01 71.4% 100.0%
1d2oA02 2.60.40.1140 Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain 0.51 40.0 3.46e-01 87.8% 66.3%
2zewB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 40.0 3.07e-01 100.0% 49.0%
3d33A00 2.60.40.3080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 39.0 3.35e-01 91.8% 80.9%
4p04A01 2.60.40.3100 Mainly Beta › Sandwich › Immunoglobulin-like › Arylsulphate sulphotransferase monomer, N-terminal domain 0.50 37.0 3.14e-01 91.8% 71.7%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4953821 1137.1.1.1 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.71 60.0 4.84e-01 98.0% 58.0%
4299932 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 57.0 5.24e-01 91.8% 93.8%
3602934 1137.1.1.1 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.70 60.0 4.83e-01 100.0% 58.0%
4347922 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 55.0 5.25e-01 91.8% 100.0%
4544750 1137.1.1.0 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain 0.69 59.0 4.61e-01 100.0% 54.5%
5009544 1137.1.1.1 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.67 59.0 4.45e-01 100.0% 49.2%
3960443 1137.1.1.0 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain 0.67 58.0 4.43e-01 100.0% 53.3%
4088209 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 57.0 5.31e-01 100.0% 96.9%
4302032 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 58.0 5.34e-01 100.0% 95.4%
4505797 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 53.0 4.94e-01 91.8% 93.8%
3964762 1137.1.1.1 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.67 56.0 4.29e-01 100.0% 51.2%
3290857 1137.1.1.1 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.67 58.0 4.32e-01 100.0% 50.0%
3953472 1137.1.1.1 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.67 58.0 4.31e-01 100.0% 49.2%
4660084 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 57.0 5.17e-01 100.0% 91.3%
4929668 1137.1.1.1 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.67 57.0 4.26e-01 100.0% 49.2%
5070352 1137.1.1.0 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain 0.67 56.0 4.14e-01 100.0% 53.8%
4318710 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 55.0 5.16e-01 100.0% 100.0%
4124780 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 56.0 5.00e-01 100.0% 86.3%
4157193 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 56.0 5.08e-01 100.0% 91.4%
1937462 1137.1.1.1 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.66 57.0 4.19e-01 100.0% 47.4%
4226849 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 56.0 4.85e-01 100.0% 80.0%
3003339 1137.1.1.0 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain 0.66 56.0 4.29e-01 100.0% 62.3%
3960506 221.1.3.0 a+b two layers › beta-Grasp › Ubiquitin-related › Sulfite oxidase, middle catalytic domain 0.66 56.0 3.88e-01 100.0% 70.6%
4104821 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 55.0 4.92e-01 100.0% 84.0%
4324489 1137.1.1.1 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.66 56.0 4.24e-01 100.0% 51.2%
4476045 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 55.0 4.98e-01 100.0% 90.0%
4185009 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 55.0 5.14e-01 100.0% 95.4%
4109046 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 56.0 4.73e-01 100.0% 95.3%
2323861 1137.1.1.0 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain 0.65 55.0 3.92e-01 100.0% 47.9%
4930295 1137.1.1.1 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.65 54.0 4.21e-01 100.0% 57.5%
4924545 206.1.3.10 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CPSase_L_D2 0.65 55.0 4.03e-01 100.0% 47.2%
4489065 1137.1.1.1 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.65 55.0 4.17e-01 100.0% 51.2%
5008021 1137.1.1.1 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.64 55.0 4.21e-01 100.0% 50.4%
4487969 1137.1.1.1 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.64 54.0 4.12e-01 100.0% 49.2%
5054750 1137.1.1.0 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain 0.64 55.0 4.15e-01 100.0% 48.0%
5028433 206.1.3.21 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK 0.64 54.0 3.74e-01 100.0% 30.8%
4158712 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 53.0 4.80e-01 98.0% 88.6%
1937525 1137.1.1.1 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.63 53.0 4.05e-01 100.0% 49.6%
4141828 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 52.0 4.69e-01 100.0% 93.2%
3688674 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.62 50.0 4.04e-01 100.0% 93.0%
3962177 1137.1.1.0 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain 0.62 52.0 4.18e-01 100.0% 63.8%
5046503 206.1.3.21 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK 0.61 51.0 3.51e-01 100.0% 29.5%
4093838 206.1.3.21 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK 0.61 52.0 3.58e-01 100.0% 27.0%
4929314 1137.1.1.1 a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase 0.61 51.0 4.05e-01 100.0% 57.3%
3403464 379.1.1.0 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors 0.60 44.0 4.24e-01 83.7% 83.3%
3722232 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.60 49.0 3.90e-01 100.0% 93.0%
3235472 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.59 40.0 3.99e-01 75.5% 70.0%
4012058 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.59 46.0 2.94e-01 89.8% 25.3%
3221178 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.56 43.0 3.28e-01 87.8% 47.2%
3937720 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.55 39.0 2.80e-01 75.5% 24.4%
3434909 221.1.1.166 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PF26130 0.53 41.0 3.77e-01 91.8% 98.6%
4600663 206.1.3.19 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C 0.52 42.0 2.85e-01 100.0% 24.1%
3938644 219.1.1.37 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C97 0.52 42.0 3.20e-01 100.0% 73.6%
4569833 221.1.5.2 a+b two layers › beta-Grasp › Ubiquitin-related › Chemotaxis inhibitory protein CHIPS › FPRL1_inhibitor 0.50 42.0 3.39e-01 95.9% 64.1%
D2 medium residues 2-70
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ir8A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.74 40.0 2.89e-01 91.3% 21.3%
3w15A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.68 60.0 3.85e-01 100.0% 63.2%
5cflA02 3.40.50.12100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Stimulator of interferon genes protein 0.66 41.0 3.20e-01 98.6% 29.9%
2z04B03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.66 51.0 3.74e-01 84.1% 93.5%
3sreA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.66 54.0 3.45e-01 89.9% 35.3%
3k5iA03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.65 54.0 3.87e-01 89.9% 92.9%
8aa0E01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.64 56.0 3.68e-01 100.0% 71.6%
3qz4A00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.63 55.0 3.61e-01 98.6% 71.9%
5gtqA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.63 53.0 3.50e-01 95.7% 60.6%
1ri6A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 56.0 3.55e-01 98.6% 45.9%
4u6bA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.62 54.0 3.51e-01 100.0% 62.1%
3hfqA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 55.0 3.51e-01 100.0% 67.4%
2w20B01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.62 53.0 3.37e-01 100.0% 56.6%
1a0iA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 46.0 4.08e-01 81.2% 55.4%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.61 46.0 3.73e-01 84.1% 69.3%
3e5zA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.60 52.0 3.47e-01 98.6% 63.8%
4ebgA00 3.10.450.560 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 44.0 3.92e-01 82.6% 54.6%
5b3pA00 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.60 43.0 3.58e-01 78.3% 64.9%
3qf7A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 51.0 3.42e-01 98.6% 72.4%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.58 42.0 3.70e-01 81.2% 51.0%
1amiA04 3.20.19.10 Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 0.57 43.0 3.04e-01 79.7% 87.3%
1eqtA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 36.0 3.70e-01 76.8% 65.7%
2l55A00 2.40.50.320 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF 0.56 39.0 3.73e-01 72.5% 100.0%
2mp1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 37.0 3.58e-01 78.3% 59.7%
3jr7A03 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.56 42.0 3.52e-01 81.2% 83.7%
3fdjA03 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.56 43.0 3.58e-01 85.5% 78.1%
3dtdD00 2.60.40.1880 Mainly Beta › Sandwich › Immunoglobulin-like › Invasion associated locus B (IalB) protein 0.56 41.0 3.37e-01 82.6% 74.5%
7mdhA02 3.90.110.10 Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal 0.55 49.0 3.69e-01 100.0% 83.2%
6cngA03 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.55 42.0 3.53e-01 85.5% 77.3%
4qxaB00 2.30.29.230 Mainly Beta › Roll › PH-domain like › 0.55 40.0 3.28e-01 84.1% 38.1%
5wb2B00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 35.0 3.50e-01 78.3% 61.6%
1nr4C00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 36.0 3.71e-01 81.2% 72.7%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 35.0 3.36e-01 76.8% 55.2%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 42.0 3.67e-01 88.4% 82.4%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.52 37.0 3.76e-01 87.0% 76.5%
2je2A00 3.50.70.20 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › Cytochrome P460 0.52 43.0 3.48e-01 100.0% 64.3%
3deeA02 3.90.930.50 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.52 41.0 3.57e-01 89.9% 85.1%
2ky8A00 3.30.890.10 Alpha Beta › 2-Layer Sandwich › Methyl-cpg-binding Protein 2; Chain A › Methyl-cpg-binding Protein 2; Chain A 0.52 38.0 3.86e-01 79.7% 95.7%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 35.0 3.54e-01 81.2% 71.6%
3f4lA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.51 42.0 3.13e-01 100.0% 84.8%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.51 34.0 3.44e-01 71.0% 77.5%
4ic6C01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 34.0 3.04e-01 71.0% 72.7%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 34.0 3.52e-01 76.8% 74.2%
4g7nA02 3.30.1120.130 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.50 45.0 4.03e-01 98.6% 81.4%
2x8fA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.50 41.0 2.74e-01 95.7% 48.0%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3882163 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.73 55.0 3.64e-01 79.7% 26.7%
3781121 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.71 63.0 3.99e-01 100.0% 56.6%
3934558 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.70 51.0 3.21e-01 76.8% 15.2%
5001911 5.1.4.87 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › LVIVD 0.69 59.0 3.84e-01 95.7% 47.6%
3186199 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.67 51.0 3.32e-01 81.2% 40.3%
5028369 5.1.4.87 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › LVIVD 0.67 59.0 3.98e-01 100.0% 57.0%
4312097 295.1.1.15 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › UPF0128 0.67 52.0 3.90e-01 85.5% 88.6%
3738102 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.66 59.0 3.75e-01 100.0% 69.0%
3785172 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.66 59.0 3.76e-01 100.0% 50.3%
4299660 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.65 44.0 2.99e-01 71.0% 60.0%
3640086 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.64 57.0 3.59e-01 100.0% 78.3%
4847869 5.1.4.16 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A 0.64 48.0 3.30e-01 79.7% 33.0%
3996624 5.1.5.164 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_IFT140_1st, Beta-prop_IFT140_2nd 0.63 57.0 3.57e-01 100.0% 47.2%
5044642 2484.1.1.302 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB 0.63 48.0 3.18e-01 98.6% 21.6%
3313933 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.62 53.0 3.52e-01 100.0% 61.9%
4982498 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 53.0 3.14e-01 100.0% 85.4%
4196590 5.1.2.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_32N 0.61 51.0 3.33e-01 95.7% 49.9%
3515664 5.1.4.34 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup88 0.61 54.0 3.21e-01 100.0% 51.0%
4028495 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 51.0 3.31e-01 95.7% 63.3%
5054861 2004.1.1.198 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.60 50.0 3.12e-01 98.6% 80.0%
5034142 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 51.0 3.25e-01 100.0% 67.7%
3350511 844.1.1.6 beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › GRDP_C 0.60 45.0 3.25e-01 79.7% 85.8%
3246054 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.60 52.0 3.26e-01 100.0% 42.7%
3164479 3523.1.1.1 beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptF_LptG 0.59 48.0 4.29e-01 87.0% 94.7%
3637319 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 52.0 3.51e-01 100.0% 59.3%
4273211 108.1.1.115 alpha arrays › EF-hand › EF-hand-related › EF-hand › PF30551 0.59 51.0 3.26e-01 95.7% 33.4%
4990693 2.21.1.5 beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › PF27234 0.58 44.0 3.36e-01 84.1% 43.4%
3284762 4090.1.1.0 a+b two layers › BH3703-like › BH3703-like › BH3703-like 0.57 39.0 3.10e-01 71.0% 57.2%
3495079 77.3.1.5 beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN_DRC7 0.57 51.0 3.40e-01 98.6% 55.1%
3908700 391.1.1.5 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › TILa 0.57 39.0 4.03e-01 78.3% 75.4%
4408604 150.5.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.56 48.0 3.37e-01 100.0% 35.2%
1700100 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.56 37.0 3.93e-01 72.5% 78.7%
4529966 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 48.0 3.14e-01 100.0% 45.7%
4120640 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.55 43.0 3.19e-01 87.0% 44.1%
3584039 5.1.5.89 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PF31099 0.55 48.0 3.01e-01 100.0% 54.9%
4945379 301.13.1.0 a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain 0.54 42.0 3.52e-01 85.5% 79.2%
3538314 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 43.0 3.61e-01 87.0% 67.5%
4930437 220.1.1.219 beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch 0.54 41.0 3.67e-01 84.1% 60.0%
4494448 2008.1.1.183 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF27227 0.54 40.0 3.30e-01 81.2% 76.3%
3573692 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 44.0 3.71e-01 91.3% 74.8%
None 0.54 42.0 2.76e-01 84.1% 87.9%
4461189 301.13.1.1 a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV 0.53 42.0 3.54e-01 88.4% 79.2%
4941280 7000.1.1.0 alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.53 41.0 3.25e-01 98.6% 41.4%
3716892 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 41.0 3.40e-01 84.1% 82.9%
3891033 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.53 35.0 3.53e-01 81.2% 65.8%
3237464 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.53 44.0 2.84e-01 91.3% 64.8%
3411042 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.52 37.0 3.87e-01 75.4% 100.0%
5045224 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 38.0 3.62e-01 79.7% 82.4%
1094905 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.52 35.0 3.53e-01 81.2% 68.6%
3912274 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.52 39.0 3.90e-01 92.8% 81.4%
3722216 220.1.1.70 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_5 0.52 43.0 3.38e-01 92.8% 71.6%
3699353 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.52 45.0 2.94e-01 98.6% 91.4%
3951189 2484.1.1.68 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H_2 0.51 47.0 3.21e-01 100.0% 82.6%
3170622 2004.1.1.199 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23,SbcC_Walker_B 0.51 46.0 2.56e-01 100.0% 56.5%
3439990 220.1.1.76 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.51 36.0 3.35e-01 81.2% 56.7%
D3 medium residues 102-170
PDB
D4 medium residues 216-323
PDB