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MZ188976.1__QVJ82439.1__JK004_82__00082
Bact-VirMZ188976.1__QVJ82439.1__JK004_82__00082
Identity
- Accession:
- MZ188976 ↗
- Kingdom:
- phage
Quality
93.1
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 30-112
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4mamB03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.70 | 63.0 | 4.84e-01 | 100.0% | 57.4% |
| 2z04B03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.67 | 60.0 | 4.60e-01 | 100.0% | 57.0% |
| 1w96C04 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.66 | 58.0 | 4.15e-01 | 100.0% | 44.1% |
| 1tr8A01 | 2.20.70.30 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › Nascent polypeptide-associated complex domain | 0.64 | 35.0 | 4.24e-01 | 96.4% | 84.6% |
| 5u3fB01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.63 | 54.0 | 4.56e-01 | 96.4% | 92.9% |
| 1lqvB00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.62 | 54.0 | 4.26e-01 | 96.4% | 64.2% |
| 2j3wC00 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.61 | 49.0 | 4.19e-01 | 100.0% | 53.3% |
| 4u7cB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.60 | 44.0 | 4.09e-01 | 79.5% | 95.4% |
| 1gpcA00 | 3.90.198.10 | Alpha Beta › Alpha-Beta Complex › Replication Fork Single-Stranded DNA Binding Protein › Replication Fork Single-Stranded Dna Binding Protein | 0.59 | 50.0 | 3.84e-01 | 98.8% | 72.5% |
| 4clcA00 | 3.30.450.150 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem-degrading domain | 0.59 | 51.0 | 4.11e-01 | 97.6% | 66.3% |
| 4ffeX00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.56 | 48.0 | 4.04e-01 | 98.8% | 74.7% |
| 1alo006 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.55 | 44.0 | 3.90e-01 | 90.4% | 98.4% |
| 4osnA00 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.54 | 37.0 | 3.42e-01 | 96.4% | 52.7% |
| 2fauA01 | 2.60.40.640 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 49.0 | 3.97e-01 | 98.8% | 57.0% |
| 1djsA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 39.0 | 3.67e-01 | 98.8% | 62.7% |
| 1wscA01 | 3.30.700.20 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Hypothetical protein ph0010; domain 1 | 0.53 | 44.0 | 3.77e-01 | 97.6% | 83.9% |
| 3e8vA00 | 2.60.40.1120 | Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain | 0.52 | 34.0 | 3.46e-01 | 97.6% | 67.1% |
| 4joiC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 44.0 | 3.91e-01 | 100.0% | 66.1% |
| 2o3iA01 | 3.40.1610.10 | Alpha Beta › 3-Layer(aba) Sandwich › CV3147-like fold › CV3147-like domain | 0.51 | 40.0 | 2.98e-01 | 86.7% | 93.6% |
| 7ylrA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 39.0 | 3.70e-01 | 85.5% | 100.0% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4187720 | 206.1.3.2 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › GARS_A | 0.75 | 68.0 | 4.74e-01 | 100.0% | 60.0% |
| None | — | 0.71 | 65.0 | 4.77e-01 | 100.0% | 55.7% | |
| 3778873 | 206.1.3.46 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_IQCH | 0.68 | 61.0 | 4.28e-01 | 98.8% | 37.3% |
| 3673093 | 223.2.1.32 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_2 | 0.68 | 57.0 | 4.65e-01 | 97.6% | 50.0% |
| 3499000 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.68 | 60.0 | 4.09e-01 | 98.8% | 32.2% |
| 3609240 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.63 | 56.0 | 4.18e-01 | 100.0% | 47.6% |
| 4971260 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.61 | 51.0 | 4.38e-01 | 98.8% | 57.7% |
| 4977520 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.60 | 42.0 | 3.93e-01 | 74.7% | 92.7% |
| 4947650 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.60 | 52.0 | 4.70e-01 | 97.6% | 90.4% |
| 3722982 | 223.2.1.29 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENND11 | 0.60 | 51.0 | 4.46e-01 | 98.8% | 83.7% |
| 4943663 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.60 | 53.0 | 4.32e-01 | 98.8% | 72.3% |
| 3282879 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.60 | 44.0 | 3.34e-01 | 78.3% | 60.5% |
| 4947810 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.59 | 51.0 | 4.55e-01 | 97.6% | 85.0% |
| 4591456 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 37.0 | 4.06e-01 | 97.6% | 75.7% |
| 3272081 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.59 | 50.0 | 3.99e-01 | 100.0% | 45.9% |
| 3781073 | 223.2.1.29 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENND11 | 0.59 | 50.0 | 4.33e-01 | 98.8% | 88.6% |
| 5045521 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.59 | 50.0 | 4.39e-01 | 98.8% | 83.0% |
| 3277542 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.59 | 51.0 | 4.21e-01 | 97.6% | 76.1% |
| 4568546 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.59 | 41.0 | 3.70e-01 | 73.5% | 84.0% |
| 4947839 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.59 | 50.0 | 4.45e-01 | 97.6% | 81.6% |
| 3596272 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.58 | 51.0 | 3.80e-01 | 98.8% | 52.7% |
| 5053577 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.58 | 47.0 | 4.59e-01 | 98.8% | 81.1% |
| 3172638 | 223.2.1.29 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENND11 | 0.58 | 49.0 | 3.95e-01 | 100.0% | 80.5% |
| 4418109 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.58 | 44.0 | 3.72e-01 | 81.9% | 76.9% |
| 3518783 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.58 | 50.0 | 3.88e-01 | 100.0% | 55.5% |
| 3955717 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.58 | 44.0 | 3.89e-01 | 83.1% | 84.0% |
| 5049412 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.57 | 40.0 | 3.59e-01 | 74.7% | 80.0% |
| 5050115 | 223.5.1.0 ↗ | a+b three layers › Profilin-like › YNR034W-A-like › YNR034W-A-like | 0.57 | 46.0 | 4.59e-01 | 100.0% | 87.1% |
| 3608234 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.57 | 42.0 | 3.66e-01 | 80.7% | 74.1% |
| 3531180 | 223.2.1.25 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Avl9 | 0.57 | 48.0 | 3.82e-01 | 97.6% | 75.1% |
| 4946583 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.57 | 41.0 | 3.73e-01 | 77.1% | 88.7% |
| 5049631 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 50.0 | 4.23e-01 | 100.0% | 62.9% |
| 5052025 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 48.0 | 4.30e-01 | 97.6% | 86.7% |
| 5052820 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 49.0 | 3.80e-01 | 98.8% | 62.6% |
| 5049973 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 48.0 | 4.12e-01 | 98.8% | 77.9% |
| 3517268 | 223.2.1.25 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Avl9 | 0.56 | 47.0 | 3.78e-01 | 98.8% | 61.6% |
| 3741114 | 223.2.1.29 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENND11 | 0.55 | 48.0 | 3.95e-01 | 100.0% | 70.0% |
| 3190078 | 223.2.1.25 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Avl9 | 0.55 | 48.0 | 3.85e-01 | 100.0% | 61.7% |
| 3505360 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 46.0 | 4.12e-01 | 96.4% | 90.4% |
| 3231401 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.55 | 40.0 | 3.45e-01 | 80.7% | 95.2% |
| 5052185 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 45.0 | 3.98e-01 | 97.6% | 80.0% |
| 5051398 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 45.0 | 4.10e-01 | 98.8% | 78.3% |
| 4000593 | 11.1.4.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › TTR-52 | 0.53 | 41.0 | 3.78e-01 | 100.0% | 63.6% |
| 5044703 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 45.0 | 4.04e-01 | 98.8% | 82.5% |
| 3928826 | 11.1.4.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › TTR-52 | 0.52 | 40.0 | 3.28e-01 | 98.8% | 43.8% |
| 3970004 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.52 | 46.0 | 3.01e-01 | 100.0% | 56.7% |
| 3716421 | 11.1.1.667 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRAPPC13_N | 0.52 | 42.0 | 3.70e-01 | 98.8% | 61.7% |
| 3274214 | 859.1.1.1 ↗ | a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › HORMA | 0.51 | 40.0 | 3.14e-01 | 86.7% | 49.7% |
| 5041794 | 206.1.3.40 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATPgrasp_YheCD | 0.51 | 46.0 | 3.13e-01 | 100.0% | 70.2% |