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MZ188976.1__QVJ82472.1__JK004_115__00115
Bact-VirMZ188976.1__QVJ82472.1__JK004_115__00115
Identity
- Accession:
- MZ188976 ↗
- Kingdom:
- phage
Quality
79.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-73
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1konA02 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.71 | 41.0 | 3.79e-01 | 100.0% | 45.6% |
| 3fqmA01 | 2.20.25.210 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Hepatitis C NS5A, domain 1B | 0.67 | 42.0 | 4.48e-01 | 100.0% | 73.8% |
| 1mw7A02 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.67 | 39.0 | 3.72e-01 | 100.0% | 48.3% |
| 2wssA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.56 | 34.0 | 3.16e-01 | 100.0% | 46.2% |
| 1m5q101 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 39.0 | 4.00e-01 | 100.0% | 77.9% |
| 1t6lA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.53 | 32.0 | 2.21e-01 | 100.0% | 17.7% |
| 6a6fA00 | 3.90.1010.10 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.53 | 46.0 | 3.79e-01 | 100.0% | 77.9% |
| 4c92G00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 39.0 | 3.90e-01 | 100.0% | 77.3% |
| 4f7uF00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 38.0 | 3.83e-01 | 100.0% | 78.1% |
| 4c92B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 39.0 | 3.45e-01 | 100.0% | 56.2% |
| 6y79C01 | 1.10.645.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B | 0.51 | 42.0 | 2.71e-01 | 94.4% | 99.7% |
| 1ogyA01 | 3.30.200.210 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.51 | 45.0 | 3.79e-01 | 100.0% | 60.5% |
| 2if7A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.43e-01 | 100.0% | 57.7% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3837943 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.54 | 40.0 | 3.28e-01 | 81.9% | 84.8% |
| 4102002 | 244.4.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Complex1_49kDa | 0.54 | 41.0 | 4.20e-01 | 97.2% | 87.1% |
| 4452761 | 244.4.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Complex1_49kDa | 0.53 | 41.0 | 3.75e-01 | 97.2% | 62.0% |
| 5043037 | 5090.1.1.0 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains | 0.53 | 46.0 | 4.22e-01 | 100.0% | 87.0% |
| 4214517 | 3518.1.1.1 ↗ | a+b two layers › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › FMN_bind | 0.52 | 45.0 | 4.33e-01 | 100.0% | 85.9% |
| 3884710 | 2484.1.1.66 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_3 | 0.52 | 40.0 | 2.93e-01 | 81.9% | 72.3% |
| 3436491 | 227.1.1.11 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 | 0.52 | 42.0 | 3.25e-01 | 100.0% | 40.0% |
| 4961171 | 244.4.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit | 0.52 | 44.0 | 4.35e-01 | 94.4% | 94.7% |
| 3287807 | 4160.1.1.2 ↗ | beta complex topology › Barrel domain in thermophilic metalloproteases (M29) › Barrel domain in thermophilic metalloproteases (M29) › Barrel domain in thermophilic metalloproteases (M29) › PF26231 | 0.52 | 46.0 | 3.32e-01 | 100.0% | 84.4% |
| 4984358 | 244.4.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit | 0.52 | 38.0 | 4.00e-01 | 97.2% | 92.3% |
| 4950314 | 244.4.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit | 0.51 | 41.0 | 4.15e-01 | 95.8% | 91.4% |
| 5041731 | 244.4.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit | 0.51 | 40.0 | 4.08e-01 | 97.2% | 92.9% |
| 4305702 | 3518.1.1.1 ↗ | a+b two layers › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › FMN_bind | 0.51 | 44.0 | 4.26e-01 | 100.0% | 91.3% |