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MZ218124.1__QWE49732.1__X__00048

Bact-Vir

MZ218124.1__QWE49732.1__X__00048

Identity

Accession:
MZ218124 ↗
Kingdom:
phage

Quality

96.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Paenibacillus_phage_SV21

TaxID: 2834877

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-71
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4iejA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 52.0 5.04e-01 77.3% 65.3%
4fcyA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 58.0 5.46e-01 90.9% 70.5%
2ivxB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.69 50.0 3.93e-01 77.3% 44.3%
7ccmB01 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.61 44.0 3.48e-01 77.3% 44.1%
1o82A00 1.20.225.10 Mainly Alpha › Up-down Bundle › Bacteriocin As-48; Chain A › Bacteriocin AS-48 0.61 49.0 4.84e-01 90.9% 100.0%
2kjgA00 1.20.120.970 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.60 48.0 4.26e-01 90.9% 68.7%
2mg4A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.59 44.0 4.44e-01 89.4% 80.3%
3vygE00 1.10.472.20 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Nitrile hydratase, beta subunit 0.56 38.0 2.94e-01 77.3% 31.1%
2fe3B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 38.0 3.59e-01 74.2% 62.4%
2rq1A00 1.20.80.10 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › 0.55 44.0 3.95e-01 98.5% 83.5%
4xr7E01 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.53 45.0 2.97e-01 100.0% 47.4%
2yqzA02 1.10.8.900 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.53 38.0 3.81e-01 77.3% 89.7%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3723123 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.90 62.0 6.54e-01 74.2% 78.3%
3207944 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.89 62.0 7.06e-01 74.2% 96.0%
5079851 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.86 60.0 6.26e-01 77.3% 80.0%
4017824 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.83 61.0 5.84e-01 77.3% 69.3%
4011476 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.83 61.0 5.84e-01 77.3% 69.3%
3720299 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.81 60.0 5.34e-01 81.8% 56.7%
3687544 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.80 63.0 4.63e-01 83.3% 38.1%
4501343 101.35.1.0 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.76 53.0 5.80e-01 72.7% 87.3%
4571183 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.76 63.0 5.37e-01 93.9% 57.1%
3178452 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.74 62.0 6.29e-01 95.5% 93.8%
3931733 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.74 53.0 4.94e-01 77.3% 63.5%
5058272 101.35.1.0 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.74 48.0 5.66e-01 72.7% 97.8%
3940696 101.1.1.103 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF4817 0.72 50.0 5.46e-01 72.7% 96.0%
3584875 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.72 55.0 3.06e-01 81.8% 7.5%
4167899 7000.1.1.0 ↗ alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.71 53.0 5.83e-01 81.8% 94.5%
4960595 101.1.1.549 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DDE_Tnp_1_5 0.70 51.0 4.78e-01 77.3% 65.0%
4226337 101.11.1.1 ↗ alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.66 47.0 4.43e-01 75.8% 80.0%
3481256 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 53.0 4.67e-01 98.5% 59.0%
1566530 198.1.1.2 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 0.64 55.0 5.18e-01 95.5% 90.1%
5081313 182.1.3.0 ↗ alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX 0.61 50.0 4.64e-01 95.5% 90.0%
4291293 2488.1.1.3 ↗ a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › tRNA_m1G_MT 0.60 51.0 3.54e-01 98.5% 52.4%
3311588 101.1.1.10 ↗ alpha arrays › HTH › HTH › Three-helical HTH › ARID 0.59 43.0 3.61e-01 83.3% 62.3%
3525714 101.1.1.286 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PF27813 0.56 39.0 3.51e-01 74.2% 50.0%
4551030 102.1.1.27 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 0.53 37.0 2.83e-01 74.2% 34.5%
3770218 101.1.4.1 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Pou 0.50 42.0 3.65e-01 92.4% 63.1%