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MZ234010.1__QZI78570.1__22664BS2_081__00081

Bact-Vir

MZ234010.1__QZI78570.1__22664BS2_081__00081

Identity

Accession:
MZ234010 ↗
Kingdom:
phage

Quality

72.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-55
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ehbD00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.74 57.0 4.23e-01 80.0% 58.7%
1azsA00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.73 61.0 4.20e-01 94.5% 33.2%
4q5eA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.71 56.0 5.06e-01 85.5% 70.7%
2qv6B02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.69 56.0 4.41e-01 92.7% 48.4%
2pq0A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.68 47.0 3.82e-01 72.7% 93.0%
1bqnA02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.67 49.0 4.13e-01 78.2% 72.3%
1xviA02 3.30.980.20 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 0.67 50.0 4.22e-01 92.7% 46.8%
4kr6A01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.66 54.0 3.81e-01 89.1% 28.7%
4i98C01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 52.0 4.77e-01 89.1% 84.0%
4ad9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 52.0 4.46e-01 85.5% 76.2%
1t6sA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 50.0 4.34e-01 83.6% 69.8%
4qjvA03 3.30.70.3110 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 44.0 4.29e-01 89.1% 64.5%
1q36A01 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.63 52.0 3.56e-01 92.7% 36.1%
2o0bA01 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.62 51.0 3.46e-01 92.7% 34.9%
3jtnB00 3.30.70.1950 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 46.0 3.97e-01 85.5% 50.0%
4qmfB01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.62 49.0 4.48e-01 94.5% 63.4%
1in0A01 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 43.0 4.02e-01 74.5% 85.7%
7k98E03 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.61 48.0 4.49e-01 87.3% 67.6%
6vudA02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.61 49.0 4.51e-01 92.7% 100.0%
2cxiA03 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.60 48.0 4.46e-01 90.9% 68.6%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 45.0 4.22e-01 83.6% 76.8%
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.59 44.0 3.89e-01 87.3% 53.2%
7x0fA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.59 46.0 3.50e-01 89.1% 76.4%
1lxjA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 46.0 3.83e-01 87.3% 46.6%
1oyiA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 43.0 4.21e-01 80.0% 83.9%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 43.0 3.64e-01 80.0% 51.6%
2dk8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 42.0 4.03e-01 80.0% 80.0%
1x9zA02 3.30.1370.100 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › MutL, C-terminal domain, regulatory subdomain 0.57 41.0 3.61e-01 92.7% 49.4%
2xzn800 3.30.63.20 Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › 0.57 42.0 3.57e-01 80.0% 52.7%
2j0wA04 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.56 44.0 4.15e-01 96.4% 69.3%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 3.55e-01 81.8% 53.2%
3kdgA02 3.30.1370.100 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › MutL, C-terminal domain, regulatory subdomain 0.56 41.0 3.58e-01 92.7% 48.9%
2zo4A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 43.0 4.56e-01 81.8% 98.0%
7txnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 43.0 3.74e-01 87.3% 61.1%
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 40.0 3.79e-01 78.2% 81.2%
3ca8A01 1.10.3620.10 Mainly Alpha › Orthogonal Bundle › YdcF fold › YdcF like domain 0.56 39.0 3.21e-01 76.4% 40.6%
1wj5A01 1.10.10.980 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › CST, Suppressor of Cdc13 homolog, complex subunit STN1, N-terminal domain 0.55 41.0 3.53e-01 83.6% 76.5%
2qh9A00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.55 38.0 2.69e-01 72.7% 86.5%
1r1uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 40.0 3.43e-01 80.0% 53.8%
3sqnB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 40.0 3.92e-01 83.6% 77.0%
4fqdA01 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.54 42.0 2.98e-01 94.5% 33.3%
1wr8A02 3.90.1070.10 Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › 0.53 41.0 3.91e-01 89.1% 100.0%
2jscB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 38.0 3.44e-01 78.2% 62.5%
3g87A02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.52 39.0 3.73e-01 87.3% 68.7%
2l02A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 38.0 3.45e-01 81.8% 64.6%
1u5tA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 38.0 3.54e-01 85.5% 72.0%
2a07J00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 40.0 3.51e-01 83.6% 78.3%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3727831 3012.1.1.1 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase 0.74 60.0 5.24e-01 90.9% 96.5%
4951829 3012.1.1.1 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase 0.73 59.0 5.34e-01 89.1% 100.0%
5058130 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.71 51.0 4.73e-01 80.0% 70.7%
3450997 3012.1.1.1 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase 0.70 56.0 4.65e-01 89.1% 81.0%
4977053 3715.1.1.0 a+b two layers › Ribosomal protein L22e › Ribosomal protein L22e › Ribosomal protein L22e 0.70 52.0 4.90e-01 89.1% 66.7%
3988426 101.1.2.66 alpha arrays › HTH › HTH › winged helix domain › Mga 0.69 52.0 4.74e-01 81.8% 70.7%
4968322 304.126.1.0 a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.69 45.0 4.54e-01 80.0% 67.3%
3624413 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.68 54.0 5.15e-01 90.9% 72.3%
5034952 2006.1.1.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.68 54.0 3.51e-01 90.9% 32.1%
3579956 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.68 55.0 5.10e-01 90.9% 74.3%
4073171 304.120.1.11 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › UreE_C 0.67 55.0 4.67e-01 94.5% 96.8%
4246202 304.56.1.6 a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › UreE_C 0.66 54.0 4.64e-01 94.5% 96.8%
4242475 304.28.1.4 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st 0.66 52.0 4.63e-01 89.1% 72.5%
4033553 304.26.1.1 a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.65 51.0 4.18e-01 87.3% 48.6%
3600397 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.65 50.0 4.57e-01 90.9% 66.3%
5027879 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.64 53.0 4.84e-01 90.9% 78.7%
5074512 3715.1.1.0 a+b two layers › Ribosomal protein L22e › Ribosomal protein L22e › Ribosomal protein L22e 0.64 51.0 4.27e-01 92.7% 50.0%
3911302 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.63 50.0 4.79e-01 92.7% 76.9%
4071450 140.1.1.0 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.62 46.0 2.59e-01 78.2% 43.7%
4968515 305.2.1.0 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) 0.62 42.0 4.07e-01 85.5% 61.9%
4996616 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 48.0 4.77e-01 85.5% 100.0%
4954889 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.61 47.0 4.54e-01 89.1% 90.8%
3725361 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 44.0 3.82e-01 80.0% 55.6%
3964348 304.28.1.3 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD-TM1 0.60 45.0 4.12e-01 81.8% 69.3%
4506543 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 45.0 4.04e-01 85.5% 90.6%
5007853 101.1.2.192 alpha arrays › HTH › HTH › winged helix domain › B_lactamase-like_C 0.59 46.0 4.28e-01 85.5% 100.0%
4950303 101.1.2.751 alpha arrays › HTH › HTH › winged helix domain › DUF6293_C 0.59 44.0 3.80e-01 89.1% 77.1%
4984968 101.1.2.751 alpha arrays › HTH › HTH › winged helix domain › DUF6293_C 0.59 46.0 3.96e-01 87.3% 68.9%
5028855 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 43.0 3.90e-01 87.3% 72.9%
4935902 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.58 48.0 3.17e-01 94.5% 51.5%
3234377 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.57 45.0 4.10e-01 94.5% 63.7%
5080737 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 42.0 3.83e-01 80.0% 66.7%
5041252 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.57 41.0 3.81e-01 80.0% 69.3%
3837515 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 43.0 3.60e-01 81.8% 54.7%
4973217 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 42.0 3.69e-01 83.6% 62.4%
4966559 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 40.0 3.28e-01 78.2% 40.9%
5006390 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.54 40.0 3.91e-01 83.6% 78.5%
4022896 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 44.0 3.15e-01 92.7% 59.6%
3512683 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 40.0 3.88e-01 81.8% 81.5%
4007720 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 42.0 3.89e-01 89.1% 85.3%
4532474 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.53 40.0 3.84e-01 87.3% 79.7%
4279367 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.53 43.0 3.81e-01 90.9% 83.7%
5068392 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.52 39.0 3.58e-01 85.5% 66.3%
3716691 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 38.0 3.59e-01 85.5% 74.7%
3941213 101.1.2.506 alpha arrays › HTH › HTH › winged helix domain › HTH_NWD1 0.52 39.0 3.29e-01 85.5% 70.0%
3604327 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.51 41.0 3.33e-01 100.0% 94.6%
5041922 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.50 37.0 3.36e-01 81.8% 60.0%