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MZ274304.1__QYC54601.1__SEA_AGUEYBANA_43__00043

Bact-Vir

MZ274304.1__QYC54601.1__SEA_AGUEYBANA_43__00043

Identity

Accession:
MZ274304 ↗
Kingdom:
phage

Quality

89.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Nymphadoravirus› Gordonia_phage_Agueybana

TaxID: 2859634

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 16-173
PDB
Domain cluster: rep: OP820472.1__WAB10619.1__SEA_ECLIPTUS_54__00054__D11-147
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7bwfA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.76 42.0 5.48e-01 82.9% 97.7%
1nt4A01 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.55 41.0 3.61e-01 78.5% 99.2%
1hq0A00 3.60.100.10 Alpha Beta › 4-Layer Sandwich › Cytotoxic necrotizing factor 1 (CNF1) › Cytotoxic necrotizing factor, Rho-activating domain 0.53 39.0 3.21e-01 77.2% 99.7%
1ospO01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.52 31.0 3.72e-01 93.7% 87.6%
6w0pB01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.51 43.0 3.54e-01 89.2% 86.5%
2eabB01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.51 44.0 3.76e-01 91.8% 85.9%
2ciuA00 3.10.450.320 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 0.51 37.0 4.07e-01 94.9% 95.9%
2pwwA00 3.30.310.100 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › YugN-like 0.50 29.0 3.35e-01 75.9% 76.5%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4984297 4312.1.1.3 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.83 46.0 6.05e-01 81.0% 95.6%
5027871 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.78 46.0 5.94e-01 86.7% 100.0%
5065653 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.70 46.0 5.65e-01 84.8% 100.0%
3965568 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.66 56.0 5.90e-01 91.1% 100.0%
3328088 243.5.1.1 ↗ a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › Cu_amine_oxidN2 0.54 32.0 3.89e-01 81.0% 93.0%
3878005 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.53 44.0 3.81e-01 90.5% 86.4%
4337887 222.1.1.12 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH 0.52 38.0 3.63e-01 75.9% 91.1%
3768026 109.4.1.3452 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Beta-prop_ELP1_2nd 0.52 35.0 2.91e-01 90.5% 38.9%
3265334 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.52 31.0 3.66e-01 97.5% 84.5%
3914630 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.51 43.0 3.62e-01 90.5% 93.2%
165514 331.12.1.1 ↗ a+b two layers › TBP-like › YugN-like › YugN-like › YugN 0.51 28.0 3.28e-01 74.7% 75.0%
3519916 11.2.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.50 28.0 3.41e-01 77.2% 86.3%
3387564 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.50 33.0 3.83e-01 80.4% 99.0%
3208520 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.50 39.0 4.08e-01 81.0% 93.6%