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MZ308445.1__QWT77099.1__X__00050

Bact-Vir

MZ308445.1__QWT77099.1__X__00050

Identity

Accession:
MZ308445 ↗
Kingdom:
phage

Quality

81.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 398-487
PDB
Domain cluster: representative
CATH (66)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1mzbA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 58.0 6.11e-01 94.4% 85.4%
2qenA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 56.0 6.30e-01 98.9% 97.1%
2g9wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 52.0 5.93e-01 92.2% 94.0%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 57.0 6.24e-01 95.6% 94.7%
2mh2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 52.0 6.01e-01 90.0% 100.0%
1p6rA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 55.0 5.80e-01 98.9% 85.4%
2dk8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 50.0 5.79e-01 92.2% 96.9%
4mqvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 51.0 5.87e-01 95.6% 98.5%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 55.0 5.64e-01 93.3% 82.4%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 55.0 5.57e-01 98.9% 80.0%
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 53.0 5.35e-01 94.4% 75.8%
1u5tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 52.0 5.71e-01 98.9% 94.4%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 48.0 5.61e-01 92.2% 98.4%
3dplC03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 50.0 5.23e-01 88.9% 78.3%
2fe3B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 53.0 5.44e-01 92.2% 81.2%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 53.0 5.20e-01 100.0% 72.6%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 56.0 4.69e-01 100.0% 50.0%
5hs7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 55.0 5.33e-01 100.0% 74.5%
3eyyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 52.0 5.44e-01 93.3% 84.1%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 58.0 5.83e-01 100.0% 87.0%
1zelA01 3.90.56.20 Alpha Beta › Alpha-Beta Complex › Phenol Hydroxylase P2 Protein › replication protein C, winged helix domain 0.70 52.0 5.09e-01 97.8% 71.4%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 53.0 5.46e-01 98.9% 84.5%
2fswA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 52.0 5.03e-01 100.0% 69.6%
5iceA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 53.0 5.16e-01 100.0% 72.3%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 51.0 5.62e-01 94.4% 95.8%
2l01A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 48.0 5.09e-01 94.4% 83.1%
2do7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 55.0 5.80e-01 100.0% 95.0%
1ucrB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 52.0 5.62e-01 96.7% 94.7%
4gcvC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 50.0 4.29e-01 100.0% 48.2%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 48.0 5.13e-01 92.2% 84.4%
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 54.0 5.54e-01 98.9% 90.5%
3pqkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 53.0 5.11e-01 100.0% 74.7%
4g6qA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 52.0 5.29e-01 96.7% 83.9%
1z7uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 53.0 4.93e-01 100.0% 68.2%
1xmkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 53.0 5.57e-01 98.9% 94.9%
1fnnB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 57.0 5.48e-01 100.0% 80.6%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 54.0 5.26e-01 100.0% 77.2%
4gyiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 53.0 5.32e-01 100.0% 83.9%
2qbyA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 56.0 5.67e-01 100.0% 92.2%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 55.0 5.20e-01 97.8% 76.2%
3e1sA01 1.10.10.2220 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.66 51.0 5.07e-01 90.0% 78.9%
2vxzA02 1.10.10.1490 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.65 54.0 5.56e-01 94.4% 93.1%
2obpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 52.0 5.49e-01 100.0% 97.5%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 54.0 5.14e-01 97.8% 78.3%
3tqnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 44.0 4.79e-01 93.3% 89.0%
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.63 52.0 5.48e-01 96.7% 98.8%
3cuqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 50.0 5.20e-01 92.2% 93.8%
1wj5A01 1.10.10.980 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › CST, Suppressor of Cdc13 homolog, complex subunit STN1, N-terminal domain 0.63 56.0 5.48e-01 96.7% 91.8%
2kloA00 1.10.10.1420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA replication factor Cdt1, C-terminal WH domain 0.63 48.0 4.18e-01 96.7% 53.6%
1v3fA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 55.0 5.06e-01 98.9% 87.5%
2ns0A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 51.0 5.32e-01 94.4% 96.4%
1yyvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 51.0 4.77e-01 100.0% 72.3%
3euhC02 1.10.10.2260 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MukE-like family, C-terminal domain 0.61 55.0 5.22e-01 100.0% 93.5%
1kyzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 53.0 5.05e-01 100.0% 82.5%
2eshA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 55.0 5.06e-01 100.0% 78.9%
1uhwA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 53.0 4.97e-01 96.7% 91.7%
2vqcA00 1.10.10.1470 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like 0.60 43.0 4.75e-01 91.1% 97.1%
2hgcA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 45.0 4.84e-01 97.8% 93.6%
3u1dB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 53.0 4.54e-01 98.9% 62.9%
2pbiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 51.0 4.89e-01 96.7% 89.4%
1bm9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 49.0 4.47e-01 98.9% 73.3%
1lujB01 1.10.10.490 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Beta-catenin-interacting ICAT 0.56 30.0 3.58e-01 96.7% 84.9%
5hvqC01 3.90.1150.220 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.55 43.0 4.56e-01 94.4% 97.5%
2bgcA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 48.0 4.61e-01 97.8% 100.0%
2k7bA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.52 35.0 3.76e-01 90.0% 82.9%
2qjyB01 1.10.760.10 Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain 0.51 39.0 3.02e-01 97.8% 33.9%
ECOD (98)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3571824 101.1.2.601 alpha arrays › HTH › HTH › winged helix domain › TBPIP, LZ3wCH 0.77 58.0 4.31e-01 97.8% 33.0%
160563 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.77 57.0 6.04e-01 92.2% 86.4%
3587913 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.77 58.0 5.06e-01 100.0% 54.6%
4068860 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.76 58.0 5.20e-01 100.0% 59.2%
3773922 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.75 57.0 4.73e-01 97.8% 47.3%
3238922 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 52.0 3.67e-01 94.4% 25.1%
3382056 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 54.0 3.40e-01 95.6% 15.1%
5075649 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 56.0 5.81e-01 93.3% 83.1%
3989662 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.75 56.0 5.00e-01 100.0% 56.8%
3830447 101.1.2.397 alpha arrays › HTH › HTH › winged helix domain › WHD_MCM8 0.75 57.0 5.99e-01 100.0% 90.0%
5044288 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 54.0 5.72e-01 92.2% 85.0%
3772634 101.1.2.397 alpha arrays › HTH › HTH › winged helix domain › WHD_MCM8 0.74 54.0 5.74e-01 96.7% 86.3%
2601 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.74 55.0 5.80e-01 98.9% 85.4%
3255111 101.1.2.397 alpha arrays › HTH › HTH › winged helix domain › WHD_MCM8 0.73 51.0 5.83e-01 90.0% 100.0%
4964972 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 49.0 5.72e-01 90.0% 100.0%
3833809 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 60.0 5.95e-01 92.2% 85.3%
5043608 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 52.0 5.86e-01 93.3% 100.0%
3604132 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 50.0 5.70e-01 96.7% 100.0%
4958024 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.71 59.0 5.79e-01 100.0% 83.2%
3555783 101.1.2.374 alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD 0.71 50.0 5.03e-01 92.2% 71.0%
4956545 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 52.0 5.75e-01 92.2% 97.1%
5075009 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 58.0 5.77e-01 97.8% 83.2%
3474923 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 52.0 5.24e-01 94.4% 76.7%
4984847 101.1.2.128 alpha arrays › HTH › HTH › winged helix domain › DUF2582 0.71 49.0 5.63e-01 91.1% 100.0%
4927427 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 56.0 5.65e-01 98.9% 84.4%
3507464 101.1.2.397 alpha arrays › HTH › HTH › winged helix domain › WHD_MCM8 0.71 55.0 5.68e-01 96.7% 88.1%
4982795 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 49.0 5.68e-01 88.9% 100.0%
4974951 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.71 57.0 5.65e-01 100.0% 82.1%
4969624 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 52.0 5.78e-01 92.2% 100.0%
5029803 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 59.0 5.22e-01 98.9% 63.1%
5032747 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.70 50.0 4.65e-01 93.3% 59.1%
5055754 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 52.0 4.97e-01 98.9% 67.6%
3473498 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 55.0 5.67e-01 95.6% 89.4%
4989321 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 54.0 5.84e-01 98.9% 100.0%
5001098 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 59.0 5.93e-01 100.0% 92.2%
4949577 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 58.0 5.71e-01 100.0% 85.3%
3667030 101.1.2.466 alpha arrays › HTH › HTH › winged helix domain › WHD_MCM3_C 0.69 50.0 5.32e-01 92.2% 88.5%
3718412 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 63.0 4.28e-01 100.0% 48.5%
3677397 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.68 50.0 3.08e-01 92.2% 13.7%
3388122 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 55.0 5.45e-01 100.0% 82.1%
5075194 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 51.0 4.73e-01 96.7% 62.6%
3932917 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 57.0 5.72e-01 98.9% 90.0%
4032197 101.1.2.231 alpha arrays › HTH › HTH › winged helix domain › Staph_reg_Sar_Rot 0.68 55.0 5.08e-01 100.0% 68.7%
3659057 275.1.1.0 a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase 0.68 41.0 4.93e-01 74.4% 98.2%
5064577 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 52.0 4.60e-01 97.8% 56.9%
3367445 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 59.0 5.06e-01 98.9% 81.4%
3928777 101.1.2.154 alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.67 54.0 5.06e-01 100.0% 71.8%
4975130 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.67 52.0 5.13e-01 95.6% 78.9%
3582572 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 56.0 4.95e-01 92.2% 90.0%
5024966 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 53.0 4.51e-01 100.0% 53.8%
3268630 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 54.0 5.39e-01 100.0% 84.2%
3615178 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 59.0 4.67e-01 100.0% 52.4%
5016606 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 50.0 4.31e-01 98.9% 51.4%
4968041 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.66 52.0 4.42e-01 96.7% 52.4%
3988732 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 54.0 5.11e-01 97.8% 74.1%
3621577 101.1.2.90 alpha arrays › HTH › HTH › winged helix domain › HTH_9 0.66 56.0 4.98e-01 94.4% 91.5%
5026582 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 50.0 4.99e-01 93.3% 76.8%
4979355 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 53.0 4.95e-01 100.0% 71.8%
3625878 101.1.2.154 alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.65 53.0 5.15e-01 100.0% 80.0%
3494456 101.1.2.4 alpha arrays › HTH › HTH › winged helix domain › Forkhead 0.65 50.0 4.82e-01 98.9% 71.4%
5077786 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.65 53.0 5.42e-01 100.0% 91.8%
1167050 101.1.2.145 alpha arrays › HTH › HTH › winged helix domain › HHH_4 0.64 52.0 4.41e-01 91.1% 53.8%
3587554 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.64 53.0 5.11e-01 97.8% 80.0%
5070584 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.64 52.0 5.21e-01 100.0% 87.8%
3386834 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 58.0 5.26e-01 100.0% 78.3%
3786023 101.1.2.154 alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.64 53.0 3.88e-01 100.0% 34.2%
5070343 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 51.0 5.11e-01 97.8% 86.7%
4024350 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 57.0 4.92e-01 100.0% 71.4%
3614122 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 52.0 5.30e-01 100.0% 90.9%
4971669 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 51.0 4.41e-01 100.0% 55.9%
3187821 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 53.0 5.01e-01 93.3% 97.3%
3910185 101.1.2.12 alpha arrays › HTH › HTH › winged helix domain › DEP 0.62 55.0 5.00e-01 97.8% 83.3%
3167820 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 52.0 5.37e-01 94.4% 98.8%
4970991 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 50.0 4.52e-01 100.0% 64.0%
3592259 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 47.0 4.47e-01 94.4% 69.5%
3726630 101.1.2.12 alpha arrays › HTH › HTH › winged helix domain › DEP 0.61 54.0 4.78e-01 100.0% 98.5%
4975635 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 51.0 4.02e-01 92.2% 43.7%
3250569 101.1.2.151 alpha arrays › HTH › HTH › winged helix domain › COR 0.61 46.0 4.99e-01 91.1% 98.7%
3670739 101.1.2.98 alpha arrays › HTH › HTH › winged helix domain › CDT1 0.60 54.0 4.44e-01 100.0% 61.3%
4964911 101.1.2.920 alpha arrays › HTH › HTH › winged helix domain › HTH_TbsP_C 0.60 49.0 4.45e-01 97.8% 65.6%
3268398 108.1.1.29 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.60 47.0 4.14e-01 100.0% 57.0%
3700540 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 48.0 5.08e-01 91.1% 98.8%
3481937 101.1.2.118 alpha arrays › HTH › HTH › winged helix domain › Dcc1 0.59 48.0 4.99e-01 95.6% 95.3%
4971257 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 53.0 4.16e-01 100.0% 54.1%
3940174 101.1.2.98 alpha arrays › HTH › HTH › winged helix domain › CDT1 0.58 51.0 4.10e-01 100.0% 56.2%
4957324 101.1.2.920 alpha arrays › HTH › HTH › winged helix domain › HTH_TbsP_C 0.58 50.0 4.54e-01 100.0% 70.4%
4947840 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 50.0 3.80e-01 98.9% 89.3%
3499511 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 50.0 4.74e-01 100.0% 98.2%
3629452 101.1.2.98 alpha arrays › HTH › HTH › winged helix domain › CDT1 0.57 50.0 4.03e-01 100.0% 53.0%
3587546 101.1.2.19 alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.56 51.0 4.20e-01 100.0% 60.6%
5022395 101.1.2.19 alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac 0.56 51.0 4.14e-01 100.0% 62.4%
3624335 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 50.0 4.03e-01 100.0% 92.6%
5082118 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 46.0 4.83e-01 92.2% 98.8%
3991612 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 49.0 3.68e-01 98.9% 91.8%
4943300 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 50.0 3.96e-01 100.0% 57.8%
3577481 101.1.2.416 alpha arrays › HTH › HTH › winged helix domain › WH_Egal 0.55 49.0 4.08e-01 100.0% 98.1%
3264027 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 45.0 4.51e-01 94.4% 93.3%
5049729 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 39.0 4.21e-01 92.2% 97.3%
D2 medium residues 30-78_215-294
PDB
Domain cluster: representative
CATH (65)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8fazD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 68.0 5.51e-01 100.0% 83.1%
2ht1A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 67.0 5.53e-01 100.0% 88.0%
3bosB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 66.0 6.14e-01 100.0% 85.2%
7mcsC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 65.0 5.45e-01 98.4% 100.0%
1fnnA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 64.0 5.77e-01 100.0% 97.1%
1fx0B02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 63.0 4.90e-01 100.0% 73.6%
6qelJ01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 63.0 5.64e-01 100.0% 80.3%
1e9rD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 64.0 4.78e-01 100.0% 82.4%
2qbyA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 63.0 5.69e-01 100.0% 97.1%
7jgsE01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 62.0 5.54e-01 98.4% 91.1%
1l8qA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 62.0 5.68e-01 100.0% 89.1%
5da9A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 62.0 4.49e-01 100.0% 91.6%
2fnaA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 62.0 5.27e-01 100.0% 91.6%
3bs4A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 61.0 4.90e-01 99.2% 88.2%
3vkhB07 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 62.0 5.41e-01 100.0% 87.8%
8ea4D01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 60.0 5.62e-01 97.7% 99.4%
3eccA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 60.0 5.60e-01 99.2% 96.3%
8db3B02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 62.0 5.22e-01 100.0% 91.3%
5bq5B00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 61.0 5.35e-01 100.0% 80.7%
1osnC00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 56.0 4.22e-01 93.8% 49.5%
3b85A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 60.0 5.24e-01 100.0% 86.6%
1w36B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 58.0 4.65e-01 97.7% 97.6%
8dgfB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 59.0 5.16e-01 100.0% 75.4%
2dr3A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 59.0 4.82e-01 100.0% 97.0%
1jbkA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 57.0 5.05e-01 100.0% 66.1%
4bj1A02 3.40.50.12060 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.64 58.0 5.60e-01 100.0% 95.9%
2gzaB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 58.0 4.89e-01 100.0% 79.3%
7xpcA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 57.0 4.26e-01 100.0% 95.1%
2bjvA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 58.0 5.38e-01 100.0% 94.3%
1ihuA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 56.0 4.59e-01 100.0% 65.7%
4hwgA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.62 37.0 3.47e-01 98.4% 46.5%
4tl8F00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 57.0 4.79e-01 100.0% 89.7%
1m8pA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 54.0 4.77e-01 93.8% 84.8%
2b8tA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 53.0 5.18e-01 91.5% 99.3%
2p6rA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 56.0 4.91e-01 100.0% 88.7%
4xjxA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 55.0 4.84e-01 98.4% 97.9%
2gk6A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 56.0 4.40e-01 100.0% 65.7%
3pvsB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 55.0 5.20e-01 100.0% 86.8%
2plrA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 51.0 4.35e-01 93.8% 88.2%
4ljyA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 53.0 4.23e-01 100.0% 71.9%
8ebtA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 54.0 4.79e-01 100.0% 99.4%
5lklB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 50.0 4.89e-01 98.4% 85.4%
1reqB01 3.20.20.240 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Methylmalonyl-CoA mutase 0.58 47.0 3.31e-01 89.1% 67.7%
1xrsA00 3.20.20.440 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › D-Lysine 5,6-aminomutase alpha subunit 0.57 49.0 3.27e-01 93.0% 57.9%
2hyiC02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 48.0 4.41e-01 92.2% 94.0%
2px0A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 51.0 4.54e-01 99.2% 85.9%
5supC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 51.0 4.33e-01 100.0% 87.3%
1vpqA00 3.20.20.410 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Protein of unknown function UPF0759 0.56 46.0 3.70e-01 89.1% 99.6%
2hf9B00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 47.0 4.04e-01 93.0% 71.8%
2inbA00 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.55 44.0 4.44e-01 85.3% 96.1%
5u4nA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 48.0 3.62e-01 100.0% 90.9%
8alzB05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 48.0 4.20e-01 100.0% 67.3%
5hj7A01 3.40.50.1860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 40.0 3.95e-01 94.6% 70.4%
4wqmA03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.54 48.0 4.78e-01 97.7% 99.2%
4lpsA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 46.0 3.84e-01 93.0% 54.9%
3duwA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 42.0 3.58e-01 85.3% 92.2%
2c9oA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 48.0 4.15e-01 100.0% 79.0%
7fg9A02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.53 31.0 2.94e-01 80.6% 44.4%
7clgB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 48.0 4.55e-01 100.0% 100.0%
2c42A01 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.52 47.0 3.79e-01 100.0% 66.5%
1cjmA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 42.0 3.58e-01 87.6% 83.4%
1aa6A03 3.40.228.10 Alpha Beta › 3-Layer(aba) Sandwich › Dimethylsulfoxide Reductase; domain 2 › Dimethylsulfoxide Reductase, domain 2 0.52 46.0 4.02e-01 97.7% 89.2%
1gvfB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 44.0 3.55e-01 95.3% 99.6%
1yeyA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.51 41.0 3.20e-01 89.1% 69.3%
1sbzD00 3.40.50.1950 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavin prenyltransferase-like 0.50 42.0 3.80e-01 93.0% 81.0%
ECOD (96)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5071814 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.77 72.0 5.73e-01 100.0% 60.0%
4992073 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.77 72.0 6.07e-01 99.2% 87.8%
4955369 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.76 70.0 5.98e-01 99.2% 76.5%
4943760 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.76 71.0 6.20e-01 100.0% 90.8%
3249726 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 68.0 5.89e-01 97.7% 92.3%
5056787 2004.1.1.1206 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › BrxC_BrxD 0.75 69.0 5.42e-01 100.0% 94.2%
5027114 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.75 69.0 5.81e-01 100.0% 88.1%
4953877 2004.1.1.66 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase_2 0.75 68.0 5.69e-01 98.4% 93.5%
4992911 2004.1.1.66 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase_2 0.74 69.0 5.66e-01 99.2% 95.9%
4980491 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 69.0 5.38e-01 100.0% 86.5%
5043761 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.73 67.0 5.81e-01 100.0% 87.2%
3602841 2004.1.1.66 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase_2 0.73 66.0 5.50e-01 97.7% 92.1%
3938861 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.73 66.0 5.97e-01 99.2% 90.3%
4937848 2004.1.1.343 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14 0.72 68.0 5.61e-01 100.0% 64.2%
5017850 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 67.0 6.36e-01 100.0% 91.3%
3789963 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 67.0 5.40e-01 100.0% 70.2%
3743736 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.71 65.0 5.98e-01 98.4% 92.7%
3646142 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.71 65.0 5.57e-01 100.0% 87.8%
4998160 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.71 65.0 4.70e-01 100.0% 73.3%
None 0.71 65.0 5.65e-01 100.0% 90.8%
3932850 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.71 65.0 5.93e-01 99.2% 94.7%
4979036 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.71 65.0 5.34e-01 100.0% 78.7%
3785318 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.71 65.0 5.57e-01 100.0% 88.0%
3620711 2004.1.1.189 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 0.70 65.0 5.80e-01 98.4% 92.0%
3479175 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 65.0 5.70e-01 100.0% 90.8%
4976899 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 63.0 5.50e-01 98.4% 82.6%
3291455 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.69 63.0 5.54e-01 100.0% 83.2%
4969408 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 51.0 4.68e-01 91.5% 60.0%
4268927 2004.1.1.189 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 0.69 63.0 5.37e-01 100.0% 82.0%
2127631 2004.1.1.189 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 0.69 64.0 5.62e-01 100.0% 92.3%
4979477 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.69 63.0 4.67e-01 100.0% 63.1%
3493126 2004.1.1.189 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 0.69 62.0 5.34e-01 100.0% 94.6%
3208339 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 63.0 5.26e-01 99.2% 71.6%
5069501 2004.1.1.189 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 0.68 63.0 5.27e-01 100.0% 75.3%
3229658 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.68 63.0 5.62e-01 100.0% 89.7%
5070664 2004.1.1.189 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 0.68 63.0 5.06e-01 100.0% 80.0%
4017982 2004.1.1.366 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N 0.68 62.0 4.94e-01 100.0% 72.2%
3787057 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.68 61.0 5.59e-01 100.0% 90.6%
None 0.67 61.0 4.88e-01 98.4% 81.2%
3736049 2004.1.1.366 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N 0.67 62.0 5.09e-01 99.2% 78.7%
4972258 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 62.0 5.65e-01 100.0% 90.6%
4968937 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 63.0 5.14e-01 100.0% 70.2%
4988182 2004.1.1.189 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 0.67 61.0 5.23e-01 100.0% 84.9%
5070037 2004.1.1.189 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 0.67 61.0 5.01e-01 100.0% 74.5%
3622238 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 62.0 5.73e-01 100.0% 88.7%
3875594 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 62.0 4.95e-01 100.0% 86.5%
5062172 2004.1.1.56 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.67 62.0 5.05e-01 100.0% 67.8%
4974760 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 61.0 5.27e-01 100.0% 90.3%
5062315 2004.1.1.56 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC 0.66 61.0 5.06e-01 100.0% 75.0%
3708291 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 61.0 4.94e-01 100.0% 95.7%
3712009 2004.1.1.202 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_28 0.66 57.0 4.84e-01 93.8% 83.8%
None 0.66 60.0 4.80e-01 98.4% 89.8%
1711669 2004.1.1.436 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C, TIP49 0.66 60.0 4.94e-01 100.0% 81.4%
3961952 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 57.0 5.62e-01 100.0% 87.1%
3613995 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 60.0 4.19e-01 100.0% 54.1%
3713458 2004.1.1.135 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 0.65 60.0 5.08e-01 100.0% 88.6%
4019008 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.65 61.0 5.12e-01 100.0% 81.0%
3791731 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.65 60.0 5.38e-01 100.0% 79.4%
3457145 2004.1.1.462 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NBD_SMAX1 0.65 58.0 5.23e-01 100.0% 77.8%
5053129 2004.1.1.70 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › dNK 0.65 57.0 4.79e-01 93.8% 86.7%
3801049 148.1.3.208 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_NAV1 0.65 59.0 4.56e-01 100.0% 48.8%
4646406 2004.1.1.123 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_RecD 0.65 60.0 5.45e-01 100.0% 89.4%
4022079 2004.1.1.366 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N 0.65 59.0 4.51e-01 100.0% 67.5%
4678908 2004.1.1.79 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin 0.65 56.0 4.64e-01 93.8% 77.3%
4009589 2004.1.1.22 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activat 0.65 59.0 5.08e-01 100.0% 82.5%
3955026 2004.1.1.189 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 0.64 59.0 5.51e-01 99.2% 100.0%
3759530 148.1.3.208 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_NAV1 0.64 59.0 4.57e-01 100.0% 52.4%
3278130 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.64 60.0 5.40e-01 100.0% 84.7%
3849759 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.64 59.0 5.29e-01 100.0% 82.3%
5063952 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.64 59.0 4.65e-01 100.0% 61.2%
4958529 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.64 58.0 5.16e-01 99.2% 88.1%
4353243 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.64 58.0 4.04e-01 100.0% 99.3%
3718866 2004.1.1.135 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 0.64 58.0 4.86e-01 100.0% 80.5%
4928969 2004.1.1.79 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Thymidylate_kin 0.64 55.0 4.74e-01 93.8% 86.4%
3286729 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.64 59.0 5.34e-01 100.0% 84.7%
1866786 2004.1.1.123 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_RecD 0.63 59.0 5.18e-01 100.0% 79.9%
3999160 2004.1.1.542 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5, AAA_7 0.63 57.0 3.69e-01 99.2% 39.3%
3957998 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.63 58.0 4.92e-01 100.0% 84.9%
3601536 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.63 50.0 4.65e-01 85.3% 97.0%
3933578 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.63 59.0 5.09e-01 100.0% 86.3%
5041642 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.62 57.0 4.63e-01 100.0% 65.4%
4318504 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.62 57.0 5.16e-01 100.0% 94.1%
4013486 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 56.0 4.21e-01 98.4% 72.1%
3450654 2004.1.1.420 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, TIP49 0.62 54.0 5.06e-01 96.9% 95.0%
5073208 2004.1.1.42 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.60 55.0 4.27e-01 100.0% 58.9%
3221095 2004.1.1.135 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 0.58 53.0 5.21e-01 100.0% 97.1%
3284549 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 54.0 3.87e-01 99.2% 42.6%
4218663 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 52.0 4.52e-01 100.0% 77.6%
3654078 2003.1.5.31 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS 0.57 46.0 3.26e-01 86.0% 68.4%
4991401 2004.1.1.156 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.56 50.0 3.83e-01 100.0% 62.6%
3925713 2004.1.1.500 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5, AAA_6 0.56 50.0 4.08e-01 100.0% 63.3%
3315112 2004.1.1.364 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.56 48.0 3.37e-01 100.0% 28.1%
None 0.54 48.0 3.95e-01 100.0% 82.0%
4029734 2004.1.1.137 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TIP49 0.53 47.0 3.77e-01 99.2% 75.6%
3725360 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 46.0 4.00e-01 100.0% 81.4%
3359763 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.51 47.0 4.19e-01 100.0% 76.1%
D3 medium residues 79-148_193-214
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1jogA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.73 57.0 5.01e-01 83.7% 76.3%
8hk0B03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.73 58.0 5.07e-01 85.9% 79.0%
4hr1A00 1.20.1270.410 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.71 53.0 4.94e-01 80.4% 92.4%
2rdcA00 1.10.287.800 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 0.71 50.0 4.44e-01 73.9% 91.0%
1rx0A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.69 54.0 4.62e-01 85.9% 83.2%
1x8zB00 1.20.140.40 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein 0.68 53.0 4.59e-01 83.7% 65.3%
4m0mA03 1.20.1270.430 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.68 48.0 5.16e-01 73.9% 98.7%
2hz8A00 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.67 51.0 4.75e-01 81.5% 76.5%
4y9jA01 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.66 55.0 4.70e-01 91.3% 82.6%
2efkA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.66 51.0 3.68e-01 82.6% 84.0%
3qo8A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.66 48.0 4.63e-01 77.2% 95.3%
3m7gA02 1.10.8.1010 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.65 56.0 5.57e-01 94.6% 95.8%
1e1dA02 1.20.1270.20 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.65 51.0 5.34e-01 87.0% 92.9%
4oe8C00 1.10.8.1170 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.64 50.0 5.18e-01 83.7% 98.9%
2ewfA02 1.20.1270.310 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.63 48.0 5.07e-01 82.6% 92.6%
7kfuC02 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.63 49.0 3.67e-01 84.8% 64.4%
1o5hA00 1.20.120.680 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle 0.62 55.0 4.30e-01 100.0% 60.5%
2vkzA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.61 39.0 2.80e-01 71.7% 22.9%
5bn3A04 1.10.1140.10 Mainly Alpha › Orthogonal Bundle › Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 › Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3 0.61 52.0 4.54e-01 92.4% 70.5%
1vljA02 1.20.1090.10 Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain 0.61 48.0 3.72e-01 98.9% 37.4%
1yq1A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.60 42.0 3.93e-01 71.7% 99.1%
2rldA00 1.20.1440.60 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence 0.59 45.0 4.28e-01 83.7% 80.7%
4ceiA03 6.10.250.2380 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.58 45.0 4.21e-01 82.6% 88.4%
2hfiA00 1.20.120.440 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like 0.56 44.0 4.05e-01 85.9% 70.7%
1y4cA03 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.54 48.0 4.50e-01 98.9% 81.4%
4gc0A01 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.54 47.0 3.54e-01 100.0% 54.2%
2qgaB01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.53 43.0 4.06e-01 90.2% 86.0%
ECOD (27)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3216584 632.1.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain 0.81 63.0 6.28e-01 81.5% 98.9%
3466653 192.29.1.101 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Rx_N 0.77 61.0 5.67e-01 84.8% 74.8%
3660496 604.3.1.19 alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › DUF3475 0.75 58.0 4.32e-01 82.6% 92.9%
4013672 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.73 53.0 5.20e-01 76.1% 86.0%
3542655 385.1.1.20 few secondary structure elements › Cystine-knot cytokines › Cystine-knot cytokines › Cystine-knot cytokines › AMH_N 0.72 52.0 5.28e-01 79.3% 76.7%
5014264 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.71 56.0 5.72e-01 84.8% 92.2%
5028028 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.70 61.0 5.45e-01 98.9% 91.1%
3517647 632.7.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.69 55.0 5.56e-01 84.8% 97.8%
3699903 5069.1.3.0 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits 0.67 46.0 4.48e-01 85.9% 65.0%
3995241 632.11.1.2 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › DOCK_N 0.66 57.0 5.54e-01 97.8% 86.0%
3600361 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.66 45.0 4.51e-01 70.7% 84.2%
3178900 192.2.1.30 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Uds1 0.64 44.0 3.76e-01 70.7% 68.3%
3924037 632.11.1.2 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › DOCK_N 0.63 54.0 5.35e-01 100.0% 93.7%
5043625 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.62 45.0 3.83e-01 76.1% 79.3%
4127912 160.1.1.1 alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › ATP-synt_ab_C 0.62 47.0 4.16e-01 83.7% 56.9%
5047712 632.11.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.61 46.0 5.03e-01 95.7% 100.0%
4015486 601.4.1.60 alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › TMD0_ABC 0.61 50.0 4.11e-01 88.0% 60.6%
4451876 160.1.1.1 alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › ATP-synt_ab_C 0.61 46.0 4.00e-01 80.4% 52.9%
3393338 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.61 49.0 4.13e-01 87.0% 73.2%
4030405 603.6.1.0 alpha bundles › STAT-like › MukF C-terminal domain-like › MukF C-terminal domain-like 0.60 44.0 3.35e-01 76.1% 45.7%
5042057 3871.1.1.0 alpha duplicates or obligate multimers › PHIST › PHIST › PHIST 0.60 48.0 4.81e-01 89.1% 95.7%
3959034 633.6.1.0 alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like 0.60 48.0 3.75e-01 85.9% 84.7%
4963973 1203.1.2.0 alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 0.59 45.0 3.75e-01 82.6% 61.8%
4259224 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.58 45.0 3.77e-01 81.5% 95.5%
3230496 605.4.1.0 alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein 0.58 48.0 5.01e-01 98.9% 100.0%
3928811 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.58 45.0 3.13e-01 84.8% 34.8%
4399436 601.54.1.0 alpha bundles › Four-helical up-and-down bundle › low CO2-inducible protein LCI1 › low CO2-inducible protein LCI1 0.57 48.0 4.20e-01 92.4% 72.1%
D4 medium residues 301-393
PDB
Domain cluster: representative
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1iqpA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.77 50.0 5.81e-01 84.9% 96.9%
6vvoC02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.76 51.0 5.91e-01 86.0% 98.4%
1sxjC02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.76 54.0 6.07e-01 86.0% 98.6%
3zh9B02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.74 50.0 5.68e-01 89.2% 92.9%
2l09A01 1.10.8.550 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B 0.71 41.0 5.08e-01 75.3% 100.0%
1njgB01 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.71 46.0 5.11e-01 81.7% 84.9%
3pvsA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.68 51.0 5.51e-01 79.6% 96.1%
2v6zM00 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.68 50.0 5.46e-01 88.2% 96.0%
1wwiA00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.66 57.0 4.78e-01 91.4% 98.0%
3fhnA05 1.10.10.2270 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Dsl1p vesicle tethering complex, Tip20p subunit, domain E 0.63 26.0 3.04e-01 71.0% 47.8%
7wd3A04 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.63 48.0 5.07e-01 96.8% 98.7%
1r4vA00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.62 53.0 4.47e-01 92.5% 97.4%
2q9rA01 1.20.1590.10 Mainly Alpha › Up-down Bundle › YP_001051499.1 fold like › YP_001051499.1 domain like 0.62 43.0 3.46e-01 73.1% 94.4%
1jqjD03 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.61 50.0 5.20e-01 97.8% 95.3%
3ihmA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 51.0 3.99e-01 100.0% 94.9%
3hzjA03 1.10.472.80 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Ypt/Rab-GAP domain of gyp1p, domain 3 0.58 49.0 4.29e-01 95.7% 78.5%
1ij5A03 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.57 41.0 3.67e-01 74.2% 89.3%
3a06B03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.57 47.0 4.88e-01 93.5% 96.6%
2cruA01 1.10.8.140 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PDCD5, DNA-binding domain 0.57 38.0 4.11e-01 81.7% 83.1%
3vkgA09 1.20.920.30 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › 0.56 47.0 4.13e-01 94.6% 68.1%
2lrmA00 1.10.890.30 Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › YmgD protein 0.54 39.0 4.05e-01 81.7% 83.3%
2y1eA03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.53 41.0 4.20e-01 82.8% 96.6%
2xzmV01 1.10.60.20 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 0.53 27.0 3.12e-01 90.3% 67.2%
1j8yF01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.53 36.0 3.75e-01 79.6% 76.7%
3gziA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.50 38.0 3.02e-01 81.7% 87.2%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4032558 148.1.3.222 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF27254 0.80 54.0 6.32e-01 88.2% 100.0%
2832150 148.1.3.173 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 0.79 55.0 6.24e-01 81.7% 95.7%
5031386 148.1.3.42 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid 0.79 53.0 6.11e-01 86.0% 96.9%
3520054 148.1.3.173 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 0.79 52.0 6.08e-01 80.6% 96.9%
4948181 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.79 63.0 6.61e-01 84.9% 96.5%
4029750 148.1.3.42 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid 0.78 52.0 6.04e-01 86.0% 96.9%
5003869 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.78 52.0 5.97e-01 81.7% 96.9%
3987908 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.78 52.0 5.96e-01 81.7% 96.9%
4379243 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.77 52.0 6.06e-01 81.7% 98.5%
4948160 148.1.3.405 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Rep_fac_C 0.77 50.0 5.81e-01 81.7% 93.8%
3080975 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.77 51.0 5.88e-01 84.9% 95.4%
3247646 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.76 51.0 5.88e-01 86.0% 96.9%
5040633 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.76 50.0 5.78e-01 84.9% 95.4%
4069825 148.1.3.42 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid 0.76 50.0 5.82e-01 88.2% 96.9%
4965689 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.76 48.0 5.73e-01 80.6% 100.0%
5054243 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.75 49.0 5.63e-01 84.9% 95.4%
4429108 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.74 48.0 5.45e-01 88.2% 88.6%
4953878 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.74 59.0 6.14e-01 97.8% 94.1%
4562042 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.72 49.0 5.44e-01 84.9% 92.9%
4063557 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.71 51.0 5.76e-01 82.8% 100.0%
4954532 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.70 55.0 5.74e-01 95.7% 94.1%
3268426 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.68 50.0 5.33e-01 91.4% 90.0%
4209560 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.68 52.0 5.40e-01 88.2% 89.4%
3630738 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.67 51.0 5.24e-01 96.8% 84.4%
3389471 148.1.3.9 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Dpoe2NT 0.67 48.0 5.36e-01 86.0% 100.0%
4970089 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.67 50.0 4.96e-01 96.8% 75.0%
5064536 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.66 45.0 4.99e-01 88.2% 92.9%
3336620 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.66 50.0 4.91e-01 96.8% 75.0%
5047340 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.66 48.0 5.28e-01 89.2% 96.0%
3423 148.1.1.14 alpha arrays › Histone-like › Histone-related › Histone › DUF1931 0.66 57.0 4.77e-01 91.4% 97.3%
5073512 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.66 42.0 4.92e-01 81.7% 100.0%
3514219 148.1.3.5 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Pol_alpha_B_N 0.65 49.0 5.33e-01 90.3% 100.0%
3654733 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.65 55.0 5.65e-01 100.0% 96.7%
2756621 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.65 50.0 4.98e-01 96.8% 80.2%
3391392 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.65 49.0 5.23e-01 93.5% 95.0%
5051569 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.64 48.0 5.18e-01 87.1% 98.7%
4594328 181.1.1.2 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › FlhF_N 0.62 42.0 4.53e-01 84.9% 86.7%
4507639 102.1.2.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase 0.59 35.0 3.88e-01 92.5% 73.3%
3337198 148.1.3.15 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_assoc_2 0.59 53.0 5.03e-01 100.0% 98.2%
5038065 181.1.1.1 alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.56 38.0 4.21e-01 71.0% 91.4%
5060737 179.1.1.1 alpha bundles › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › Fer2_2 0.56 31.0 3.87e-01 75.3% 100.0%
3831850 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.55 43.0 2.73e-01 83.9% 20.2%
3583084 148.1.3.9 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Dpoe2NT 0.55 43.0 4.50e-01 86.0% 98.8%
5022995 5067.1.1.4 alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › MMPL 0.54 47.0 3.80e-01 97.8% 57.8%
4118286 166.1.1.1 alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C 0.53 36.0 3.80e-01 71.0% 88.2%
4076702 166.1.1.1 alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C 0.53 42.0 4.19e-01 89.2% 82.0%
4573573 166.1.1.1 alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C 0.52 43.0 4.41e-01 92.5% 96.7%
3263340 592.2.1.0 alpha arrays › PWI domain-like › YugE-like › YugE-like 0.52 30.0 3.27e-01 73.1% 71.4%