Back to structures

MZ322018.1__QXN74006.1__SEA_BLAB_80__00079

Bact-Vir

MZ322018.1__QXN74006.1__SEA_BLAB_80__00079

Identity

Accession:
MZ322018 ↗
Kingdom:
phage

Quality

90.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 29-127
PDB
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2i4kA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.62 49.0 4.51e-01 84.8% 96.9%
4p2iA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.61 48.0 4.53e-01 83.8% 96.6%
2d9uA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 28.0 3.14e-01 74.7% 55.4%
2gu3A02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 36.0 4.42e-01 100.0% 95.2%
4oxwA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.60 47.0 4.65e-01 83.8% 99.1%
2v14A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.60 48.0 4.31e-01 85.9% 92.5%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.59 47.0 4.50e-01 84.8% 91.4%
4qucA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 27.0 3.48e-01 83.8% 75.0%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 35.0 4.03e-01 100.0% 83.1%
3mtsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 26.0 3.18e-01 76.8% 64.5%
2m2lA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 27.0 3.22e-01 76.8% 65.7%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 33.0 3.63e-01 100.0% 75.3%
1yuaA02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.54 31.0 3.66e-01 100.0% 93.1%
2yk0A03 1.20.58.1930 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 40.0 3.13e-01 81.8% 52.9%
3t1oA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 46.0 3.79e-01 100.0% 86.5%
3rt0C00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 38.0 3.27e-01 81.8% 81.4%
3bdiA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 44.0 3.57e-01 100.0% 83.6%
2flhB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 42.0 3.69e-01 90.9% 83.0%
1ln1A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 41.0 3.32e-01 89.9% 69.0%
2n3gA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 35.0 3.97e-01 97.0% 98.6%
8gq6A01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.50 40.0 2.92e-01 87.9% 94.3%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3333339 4.8.1.34 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_SEND1 0.69 32.0 3.85e-01 74.7% 64.6%
3178336 277.1.1.0 a+b two layers › PX domain › PX domain › PX domain 0.65 53.0 4.77e-01 86.9% 84.4%
3933293 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.65 28.0 3.63e-01 73.7% 69.0%
4682301 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.65 53.0 3.55e-01 86.9% 31.2%
3894324 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.62 28.0 3.40e-01 70.7% 63.1%
3509864 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.62 49.0 4.56e-01 84.8% 92.8%
3270574 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.61 28.0 3.65e-01 78.8% 78.2%
3408101 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.61 48.0 4.34e-01 84.8% 77.8%
3927367 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.61 27.0 3.21e-01 71.7% 58.6%
1489902 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.60 47.0 4.65e-01 83.8% 99.1%
3562700 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.60 48.0 4.31e-01 85.9% 91.9%
3554073 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.60 48.0 4.35e-01 84.8% 81.5%
3478366 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.59 47.0 4.65e-01 84.8% 95.2%
4014568 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.59 29.0 3.59e-01 74.7% 80.0%
3928860 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.59 27.0 3.31e-01 71.7% 68.3%
3900401 277.1.1.0 a+b two layers › PX domain › PX domain › PX domain 0.58 46.0 4.29e-01 84.8% 88.8%
3182097 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.58 28.0 3.34e-01 74.7% 67.7%
3388135 4292.2.1.1 a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain › FlaG 0.57 40.0 4.46e-01 72.7% 96.0%
4054007 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.57 42.0 4.58e-01 100.0% 97.5%
3257852 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.56 29.0 3.54e-01 78.8% 83.6%
3429075 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.55 30.0 3.31e-01 78.8% 65.3%
4033429 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.54 33.0 3.67e-01 100.0% 76.2%
4926797 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.54 31.0 2.86e-01 83.8% 42.3%
4024605 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 37.0 2.89e-01 80.8% 30.6%
4336488 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.51 34.0 3.84e-01 99.0% 94.3%
3941555 7579.1.1.36 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 0.51 44.0 3.23e-01 100.0% 73.4%
3786564 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.51 37.0 2.74e-01 76.8% 42.9%
3554870 331.3.1.3 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.51 41.0 3.31e-01 89.9% 66.8%
3819309 330.1.1.5 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM 0.50 38.0 4.09e-01 99.0% 94.1%