←Back to structures
MZ322028.1__QXN74959.1__SEA_POSH_51__00051
Bact-VirMZ322028.1__QXN74959.1__SEA_POSH_51__00051
Identity
- Accession:
- MZ322028 ↗
- Kingdom:
- phage
Quality
91.2
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-35_133-200
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3l1aA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.60 | 47.0 | 3.69e-01 | 84.0% | 72.7% |
| 1a7gE00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 43.0 | 4.67e-01 | 75.0% | 95.1% |
| 1m5hA02 | 3.30.70.520 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 44.0 | 3.94e-01 | 79.0% | 65.8% |
| 2okxA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 44.0 | 3.56e-01 | 81.0% | 98.4% |
| 4aukA01 | 3.30.70.2810 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 42.0 | 4.64e-01 | 80.0% | 100.0% |
| 4erdA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.56 | 44.0 | 4.31e-01 | 84.0% | 81.5% |
| 2rrnA01 | 3.30.70.2040 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 40.0 | 4.34e-01 | 74.0% | 92.8% |
| 2cq0A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.56 | 45.0 | 4.51e-01 | 89.0% | 91.3% |
| 3zxaC02 | 2.60.40.3420 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 36.0 | 3.53e-01 | 72.0% | 60.4% |
| 2uvaG03 | 3.30.70.3320 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 40.0 | 3.96e-01 | 76.0% | 83.3% |
| 3h5xA03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.55 | 43.0 | 4.19e-01 | 87.0% | 95.7% |
| 2atzA00 | 3.90.920.20 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › HP0184-like | 0.55 | 48.0 | 3.98e-01 | 96.0% | 72.7% |
| 4b60A01 | 2.60.40.1280 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 40.0 | 3.55e-01 | 77.0% | 93.0% |
| 1bqnA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.54 | 41.0 | 4.22e-01 | 81.0% | 97.9% |
| 2fphX02 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 41.0 | 4.34e-01 | 82.0% | 94.3% |
| 2yg3A02 | 3.90.660.10 | Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › | 0.53 | 43.0 | 3.77e-01 | 91.0% | 90.2% |
| 2r0cA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.53 | 39.0 | 3.56e-01 | 78.0% | 63.0% |
| 5i2cB01 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.53 | 42.0 | 3.79e-01 | 88.0% | 93.8% |
| 3cx5A02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.53 | 43.0 | 3.42e-01 | 92.0% | 87.0% |
| 1vqzA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.53 | 46.0 | 3.57e-01 | 100.0% | 93.0% |
| 3hurA01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.52 | 34.0 | 3.00e-01 | 73.0% | 41.6% |
| 3ihgA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.52 | 37.0 | 3.29e-01 | 75.0% | 62.1% |
| 3u6xS00 | 2.60.40.3320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 39.0 | 3.85e-01 | 81.0% | 100.0% |
| 2k5gA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 40.0 | 3.35e-01 | 85.0% | 81.7% |
| 2zxqA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.51 | 35.0 | 2.60e-01 | 72.0% | 96.8% |
| 1ad2A01 | 3.30.190.20 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribosomal protein L1/L10, rRNA-binding domain | 0.51 | 43.0 | 4.11e-01 | 95.0% | 93.4% |
| 2fm8B00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.51 | 39.0 | 3.69e-01 | 84.0% | 80.8% |
| 4nhxA02 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.51 | 40.0 | 3.20e-01 | 90.0% | 91.9% |
| 4g6iC02 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.51 | 35.0 | 3.59e-01 | 81.0% | 75.5% |
| 4bjyA02 | 3.30.9.30 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › | 0.50 | 41.0 | 3.19e-01 | 89.0% | 79.1% |
| 1g0dA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 39.0 | 3.53e-01 | 83.0% | 86.9% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4442725 | 4967.1.1.25 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › Intron_maturas2+MatK_N | 0.64 | 54.0 | 3.50e-01 | 92.0% | 63.9% |
| 4396101 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.63 | 53.0 | 3.45e-01 | 92.0% | 65.9% |
| 4204243 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.61 | 43.0 | 2.79e-01 | 73.0% | 18.2% |
| 3480923 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.59 | 47.0 | 4.50e-01 | 84.0% | 76.5% |
| 4026290 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.59 | 43.0 | 4.35e-01 | 76.0% | 84.0% |
| 4374421 | 898.1.1.1 ↗ | a+b two layers › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › Ribosomal_L1 | 0.58 | 44.0 | 4.17e-01 | 80.0% | 76.5% |
| 3484288 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.58 | 45.0 | 4.59e-01 | 82.0% | 86.3% |
| 4948079 | 898.1.1.1 ↗ | a+b two layers › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › Ribosomal_L1 | 0.58 | 44.0 | 4.14e-01 | 80.0% | 75.0% |
| 3593110 | 898.1.1.0 ↗ | a+b two layers › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 | 0.57 | 43.0 | 4.09e-01 | 80.0% | 74.8% |
| 3968480 | 304.120.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmM_FDX | 0.56 | 40.0 | 4.48e-01 | 74.0% | 100.0% |
| 3240016 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.56 | 41.0 | 4.36e-01 | 78.0% | 90.0% |
| 4852485 | 2003.1.2.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase | 0.56 | 40.0 | 3.92e-01 | 74.0% | 83.5% |
| 1723263 | 11.27.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C-terminal Ig-like domain in baseplate protein ORF48 › C-terminal Ig-like domain in baseplate protein ORF48 › BppU_IgG | 0.56 | 44.0 | 4.06e-01 | 85.0% | 97.7% |
| 3704170 | 331.2.1.10 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PTHB1_pf | 0.56 | 40.0 | 4.09e-01 | 75.0% | 96.8% |
| 4069972 | 304.120.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › RlmM_FDX | 0.55 | 39.0 | 4.30e-01 | 73.0% | 100.0% |
| 4566749 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.55 | 39.0 | 3.98e-01 | 76.0% | 76.0% |
| 1176816 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.55 | 40.0 | 4.01e-01 | 78.0% | 83.7% |
| 3772640 | 10.21.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 | 0.54 | 38.0 | 3.52e-01 | 72.0% | 65.6% |
| 3645796 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.54 | 45.0 | 3.27e-01 | 92.0% | 60.7% |
| 3885326 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.54 | 37.0 | 3.57e-01 | 70.0% | 82.6% |
| 3924843 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.54 | 45.0 | 3.58e-01 | 93.0% | 71.9% |
| 3734699 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.54 | 39.0 | 3.48e-01 | 78.0% | 64.7% |
| 3285681 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.54 | 41.0 | 4.03e-01 | 82.0% | 100.0% |
| 3547860 | 10.21.1.1 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 | 0.53 | 37.0 | 3.40e-01 | 72.0% | 63.8% |
| 3936983 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.53 | 38.0 | 3.34e-01 | 75.0% | 60.7% |
| 3421867 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.52 | 41.0 | 3.06e-01 | 84.0% | 50.8% |
| 4657303 | 244.1.1.5 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › FAD_binding_3 | 0.52 | 37.0 | 3.45e-01 | 73.0% | 70.4% |
| 4032997 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 38.0 | 3.56e-01 | 77.0% | 94.4% |
| 5036818 | 898.1.1.1 ↗ | a+b two layers › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › a+b domain in Ribosomal protein L1 › Ribosomal_L1 | 0.51 | 44.0 | 4.13e-01 | 95.0% | 90.4% |
| 1587579 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.51 | 37.0 | 3.82e-01 | 77.0% | 92.7% |
| 3029678 | 244.1.1.5 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › FAD_binding_3 | 0.51 | 38.0 | 3.85e-01 | 77.0% | 91.8% |
| 3224075 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.51 | 44.0 | 3.43e-01 | 100.0% | 53.1% |
| 3482839 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 35.0 | 3.58e-01 | 71.0% | 90.0% |
| 3594640 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.51 | 40.0 | 2.64e-01 | 86.0% | 61.3% |
| 3404015 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.51 | 43.0 | 4.08e-01 | 96.0% | 80.8% |
D2
high
residues 41-126
Domain cluster:
rep: MT711888.1__QNJ57378.1__Dolphis_72__00071__D1-81
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3okyB02 | 3.30.1680.10 | Alpha Beta › 2-Layer Sandwich › ligand-binding face of the semaphorins, domain 2 › ligand-binding face of the semaphorins, domain 2 | 0.62 | 27.0 | 3.35e-01 | 70.9% | 63.5% |
| 1s28A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.55 | 38.0 | 3.42e-01 | 100.0% | 48.5% |
| 3l4gB03 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.53 | 32.0 | 3.37e-01 | 96.5% | 66.2% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5044604 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.55 | 26.0 | 2.42e-01 | 84.9% | 32.7% |
| 3920074 | 389.6.1.0 ↗ | few secondary structure elements › EGF-like › Growth factor receptor domain › Growth factor receptor domain | 0.52 | 28.0 | 2.68e-01 | 74.4% | 40.0% |