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MZ322319.1__QWY17766.1__X__00066

Bact-Vir

MZ322319.1__QWY17766.1__X__00066

Identity

Accession:
MZ322319 ↗
Kingdom:
phage

Quality

92.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-159
PDB
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 44.0 5.54e-01 77.0% 94.5%
2fe3B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 43.0 5.57e-01 78.3% 100.0%
5nl9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 42.0 5.44e-01 78.3% 100.0%
1mzbA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 41.0 5.32e-01 77.6% 100.0%
5jbrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 41.0 5.28e-01 87.5% 98.8%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 38.0 5.16e-01 81.6% 100.0%
3bz6A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 36.0 4.74e-01 71.1% 92.3%
1ku9B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 41.0 5.25e-01 86.8% 100.0%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 40.0 5.11e-01 80.3% 98.8%
3cuqA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 34.0 4.49e-01 73.0% 86.3%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 37.0 4.60e-01 76.3% 82.8%
3eyyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 39.0 5.06e-01 77.0% 100.0%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 36.0 4.22e-01 70.4% 70.2%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 39.0 5.09e-01 86.2% 100.0%
2f2eA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 37.0 4.69e-01 77.6% 89.0%
2oqgB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 35.0 4.13e-01 75.7% 70.4%
7xc2A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 44.0 5.23e-01 80.9% 100.0%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 38.0 3.92e-01 82.2% 63.1%
3i4uA01 1.20.120.1080 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.62 36.0 4.28e-01 78.3% 86.6%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 36.0 4.30e-01 79.6% 86.0%
2hqrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 37.0 4.30e-01 78.9% 84.0%
5dcmB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 39.0 4.77e-01 80.9% 99.0%
1yyvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 36.0 4.15e-01 77.6% 80.4%
2b0lC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 35.0 4.26e-01 80.9% 91.5%
3zcoA00 1.10.10.2450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.58 43.0 4.65e-01 78.3% 91.3%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.56 26.0 2.91e-01 77.6% 54.7%
4ofzA03 3.30.70.3080 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 32.0 4.18e-01 75.7% 97.8%
1y0nA00 1.10.10.610 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › YehU-like 0.56 23.0 3.21e-01 84.2% 77.5%
7sbeA01 1.10.132.70 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.52 40.0 3.51e-01 78.9% 55.2%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3716076 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.76 37.0 5.12e-01 71.1% 92.2%
3426878 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.73 46.0 5.58e-01 78.3% 96.0%
3169535 101.1.2.207 alpha arrays › HTH › HTH › winged helix domain › TFC3_eWH 0.72 42.0 5.02e-01 71.1% 86.0%
3721121 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 40.0 4.83e-01 78.3% 84.0%
4948120 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 40.0 5.04e-01 75.0% 93.3%
3940330 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.70 37.0 4.92e-01 72.4% 94.0%
5004231 101.1.2.896 alpha arrays › HTH › HTH › winged helix domain › DUF2551 0.70 42.0 5.18e-01 77.6% 94.7%
4132486 101.1.2.187 alpha arrays › HTH › HTH › winged helix domain › Rep3_C 0.69 41.0 5.20e-01 80.3% 100.0%
3167163 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.68 40.0 4.98e-01 78.3% 92.6%
4928669 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.68 43.0 5.04e-01 79.6% 90.5%
3651024 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.68 37.0 4.37e-01 73.0% 74.5%
3364232 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.68 38.0 5.01e-01 75.7% 98.8%
5054914 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 45.0 5.15e-01 84.9% 91.8%
3666424 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 46.0 5.15e-01 82.2% 88.3%
4977917 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 40.0 4.91e-01 77.0% 94.7%
5035276 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 39.0 4.93e-01 77.0% 98.9%
4972111 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 43.0 5.11e-01 82.2% 99.0%
4672445 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 43.0 4.97e-01 84.9% 90.9%
3419613 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 42.0 5.07e-01 82.2% 99.0%
1298616 101.1.2.80 alpha arrays › HTH › HTH › winged helix domain › RepA_N 0.65 46.0 4.92e-01 92.8% 83.3%
1935905 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.63 42.0 4.38e-01 83.6% 73.7%
5073852 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.62 39.0 4.21e-01 82.9% 74.4%
3824526 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 47.0 4.97e-01 83.6% 88.9%
3468855 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.61 46.0 4.63e-01 82.2% 76.8%
3592665 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 38.0 4.56e-01 77.6% 92.3%
4990315 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 43.0 4.15e-01 73.0% 72.8%
4166073 101.1.2.8 alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.60 39.0 4.66e-01 80.3% 100.0%
4527970 101.1.2.309 alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.58 42.0 3.84e-01 73.7% 78.0%
3332576 4964.1.1.2 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol 0.58 47.0 4.83e-01 85.5% 93.8%
3463151 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 44.0 4.58e-01 82.2% 84.1%
3666427 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.57 42.0 4.25e-01 76.3% 90.3%
4963293 101.1.2.921 alpha arrays › HTH › HTH › winged helix domain › DUF7109 0.57 34.0 4.27e-01 75.7% 98.9%
3875839 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.55 40.0 4.54e-01 82.2% 98.3%
3547233 101.1.2.37 alpha arrays › HTH › HTH › winged helix domain › E2F_TDP 0.53 38.0 3.59e-01 75.7% 90.0%
5053071 2004.1.3.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.53 46.0 4.31e-01 94.7% 83.2%
5033276 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.52 42.0 4.22e-01 83.6% 100.0%
D2 high residues 177-298
PDB
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3eoeD01 3.40.1380.20 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain 0.52 30.0 2.88e-01 73.0% 48.9%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3623437 4970.1.1.0 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.86 81.0 6.66e-01 100.0% 92.2%
4026154 4970.1.1.0 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.84 79.0 6.84e-01 98.4% 93.1%
3269910 4970.1.1.4 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › RPOL_N 0.84 78.0 6.99e-01 97.5% 89.4%
3550496 4970.1.1.4 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › RPOL_N 0.84 79.0 6.64e-01 99.2% 90.5%
3213952 4970.1.1.4 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › RPOL_N 0.84 78.0 6.65e-01 98.4% 91.4%
3743723 4970.1.1.4 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › RPOL_N 0.84 79.0 7.01e-01 99.2% 90.3%
4020894 4970.1.1.4 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › RPOL_N 0.84 79.0 6.54e-01 100.0% 85.5%
3785885 4970.1.1.4 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › RPOL_N 0.83 77.0 6.98e-01 98.4% 91.3%
3301000 4970.1.1.4 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › RPOL_N 0.83 77.0 6.42e-01 97.5% 91.8%
4646287 4970.1.1.0 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.82 77.0 6.59e-01 100.0% 88.6%
4079009 4970.1.1.0 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.82 75.0 6.67e-01 96.7% 90.9%
2387757 4970.1.1.4 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › RPOL_N 0.81 75.0 6.56e-01 98.4% 89.1%
3652237 4970.1.1.0 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.81 64.0 6.10e-01 82.0% 100.0%
4553377 4970.1.1.0 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.80 75.0 6.65e-01 100.0% 91.2%
4487139 4970.1.1.0 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.80 73.0 6.47e-01 97.5% 90.6%
4068023 4970.1.1.0 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.78 74.0 6.92e-01 100.0% 89.7%
3655091 4970.1.1.0 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.78 56.0 5.81e-01 73.8% 99.1%
3684638 4970.1.1.6 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DA1-like 0.77 72.0 6.15e-01 99.2% 93.0%
3701465 4970.1.1.0 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.75 69.0 6.18e-01 98.4% 87.9%
3683744 4970.1.1.6 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DA1-like 0.69 60.0 6.24e-01 92.6% 96.5%
3654189 4970.1.1.0 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.61 58.0 5.17e-01 100.0% 78.8%
4945494 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 33.0 3.92e-01 75.4% 94.9%
4082907 327.11.1.1 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 0.51 34.0 3.65e-01 95.1% 79.0%