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MZ326855.1__QZI85581.1__CPT_Suzuki_008__00008
Bact-VirMZ326855.1__QZI85581.1__CPT_Suzuki_008__00008
Identity
- Accession:
- MZ326855 ↗
- Kingdom:
- phage
Quality
90.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Casjensviridae›
Sanovirus›
Stenotrophomonas_phage_Suzuki
TaxID: 2859663
Cluster
View cluster (13 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-119
Domain cluster:
rep: KR063279.1__AKL88269.1__GMA3_92__00092__D11-122
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF23790.2 best | Kyano_Gp96 | 29.7 | 8.20e-07 | 76.1% | 69.4% |
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d9wA02 | 2.40.128.150 | Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases | 0.65 | 33.0 | 3.56e-01 | 70.9% | 56.9% |
| 2zpaA03 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 44.0 | 3.69e-01 | 84.6% | 88.7% |
| 1iwmA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.55 | 39.0 | 3.39e-01 | 71.8% | 48.6% |
| 2i79D00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 44.0 | 3.90e-01 | 84.6% | 96.4% |
| 4ghbA00 | 2.40.160.190 | Mainly Beta › Beta Barrel › Porin › | 0.55 | 44.0 | 3.49e-01 | 88.0% | 47.5% |
| 1ospO02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.55 | 39.0 | 3.67e-01 | 75.2% | 62.3% |
| 3cmbA00 | 2.40.400.10 | Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like | 0.54 | 42.0 | 3.20e-01 | 82.1% | 78.9% |
| 1sgoA01 | 3.30.2280.10 | Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) | 0.54 | 29.0 | 3.05e-01 | 88.9% | 55.6% |
| 1g5hA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.54 | 39.0 | 2.92e-01 | 75.2% | 79.2% |
| 4dsdA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.54 | 41.0 | 4.08e-01 | 82.9% | 90.5% |
| 1aqbA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 45.0 | 3.99e-01 | 92.3% | 97.1% |
| 3ec4B00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 44.0 | 3.55e-01 | 88.0% | 54.7% |
| 7wffb01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.53 | 46.0 | 3.47e-01 | 96.6% | 91.7% |
| 2xstA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 44.0 | 4.11e-01 | 89.7% | 100.0% |
| 3gjyA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 44.0 | 3.36e-01 | 89.7% | 79.2% |
| 3c4bA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 30.0 | 3.81e-01 | 80.3% | 97.0% |
| 3flpA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 38.0 | 3.12e-01 | 100.0% | 40.6% |
| 4z48A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.52 | 39.0 | 3.12e-01 | 85.5% | 38.3% |
| 1nioA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.52 | 43.0 | 3.82e-01 | 88.0% | 91.4% |
| 3iwgA01 | 3.40.630.80 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › | 0.51 | 40.0 | 3.93e-01 | 84.6% | 97.7% |
| 2m7oA00 | 3.10.450.400 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Uncharacterised protein PF15513, DUF4651 | 0.51 | 27.0 | 3.30e-01 | 90.6% | 81.4% |
| 3rwxA01 | 2.40.128.340 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 37.0 | 3.70e-01 | 76.1% | 88.3% |
| 3buuB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.51 | 41.0 | 3.36e-01 | 87.2% | 67.7% |
| 3ap9A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 37.0 | 3.46e-01 | 76.9% | 67.5% |
| 4za3A01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.51 | 42.0 | 3.77e-01 | 88.9% | 88.3% |
| 2w7qB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.51 | 36.0 | 3.11e-01 | 72.6% | 50.6% |
| 1sqhA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 41.0 | 4.03e-01 | 88.9% | 90.1% |
| 1x47A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.50 | 35.0 | 4.06e-01 | 99.1% | 97.7% |
| 3bk5A00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.50 | 41.0 | 3.28e-01 | 88.0% | 58.7% |
| 4ozuA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 42.0 | 3.07e-01 | 94.0% | 59.4% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4929797 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.64 | 32.0 | 4.37e-01 | 71.8% | 96.6% |
| 4341865 | 4325.1.1.1 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 | 0.61 | 30.0 | 4.25e-01 | 70.9% | 100.0% |
| 3794101 | 844.1.1.0 ↗ | beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain | 0.60 | 42.0 | 3.48e-01 | 72.6% | 56.2% |
| 3284714 | 4325.1.1.1 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 | 0.59 | 31.0 | 4.06e-01 | 77.8% | 93.7% |
| 3217309 | 243.6.1.4 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA | 0.59 | 37.0 | 4.25e-01 | 91.5% | 84.4% |
| 3562175 | 10.1.1.5 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Pentaxin | 0.58 | 40.0 | 3.32e-01 | 71.8% | 69.5% |
| 4948949 | 9.1.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META | 0.58 | 40.0 | 4.20e-01 | 70.9% | 88.6% |
| 3480412 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.57 | 37.0 | 4.15e-01 | 84.6% | 84.4% |
| 5022814 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.57 | 36.0 | 4.45e-01 | 77.8% | 100.0% |
| 3728854 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.56 | 31.0 | 3.98e-01 | 76.1% | 95.4% |
| 3603162 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.56 | 37.0 | 4.16e-01 | 84.6% | 86.7% |
| 3394354 | 243.6.1.4 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA | 0.56 | 37.0 | 3.96e-01 | 96.6% | 77.0% |
| 3927330 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.56 | 35.0 | 4.00e-01 | 94.0% | 84.7% |
| 3550677 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.55 | 46.0 | 3.99e-01 | 89.7% | 93.9% |
| 3274854 | 213.1.1.27 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 | 0.55 | 46.0 | 3.99e-01 | 91.5% | 92.9% |
| 5021016 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.55 | 38.0 | 4.19e-01 | 99.1% | 88.4% |
| 3965943 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.55 | 36.0 | 3.09e-01 | 72.6% | 40.4% |
| 4943586 | 243.6.1.12 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › PUA | 0.55 | 35.0 | 4.13e-01 | 82.9% | 95.0% |
| 3809272 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.54 | 46.0 | 3.47e-01 | 93.2% | 88.8% |
| 4970384 | 243.6.1.9 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 | 0.54 | 36.0 | 4.12e-01 | 82.9% | 91.8% |
| 3653236 | 3347.1.1.0 ↗ | beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 | 0.54 | 39.0 | 3.56e-01 | 75.2% | 72.2% |
| 2162624 | 3894.1.1.1 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › Asp1 | 0.54 | 41.0 | 4.05e-01 | 83.8% | 74.6% |
| 4964279 | 213.1.1.27 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 | 0.54 | 42.0 | 3.87e-01 | 84.6% | 86.7% |
| 900 | 4295.1.1.1 ↗ | beta barrels › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like › ADC | 0.54 | 42.0 | 3.21e-01 | 82.1% | 79.2% |
| 3965839 | 77.1.1.6 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › MORN_2 | 0.54 | 41.0 | 3.77e-01 | 81.2% | 63.2% |
| 3782340 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 32.0 | 3.56e-01 | 83.8% | 73.7% |
| None | — | 0.53 | 46.0 | 2.81e-01 | 94.9% | 30.0% | |
| 1279538 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.53 | 44.0 | 3.36e-01 | 89.7% | 79.2% |
| 4948218 | 243.6.1.12 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › PUA | 0.53 | 36.0 | 4.10e-01 | 82.9% | 95.3% |
| 169992 | 10.1.1.5 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Pentaxin | 0.53 | 38.0 | 3.12e-01 | 100.0% | 40.6% |
| 3846927 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.52 | 33.0 | 3.62e-01 | 80.3% | 76.8% |
| 5018904 | 71.1.1.8 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like | 0.52 | 33.0 | 2.84e-01 | 99.1% | 37.9% |
| 3925946 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 42.0 | 2.96e-01 | 88.0% | 37.1% |
| 5083058 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.52 | 33.0 | 3.95e-01 | 74.4% | 96.2% |
| 5080210 | 71.1.1.8 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like | 0.52 | 42.0 | 3.44e-01 | 88.0% | 59.1% |
| 4995302 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.51 | 43.0 | 3.88e-01 | 94.9% | 89.4% |
| 1498413 | 3894.1.1.0 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain | 0.51 | 42.0 | 4.11e-01 | 88.0% | 90.6% |
| 5041767 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.51 | 37.0 | 3.90e-01 | 93.2% | 83.8% |
| 3370322 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.51 | 33.0 | 3.69e-01 | 79.5% | 84.4% |
| 166902 | 71.1.1.8 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like | 0.50 | 41.0 | 3.28e-01 | 88.0% | 58.7% |
| 3742474 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.50 | 30.0 | 3.73e-01 | 79.5% | 94.7% |