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MZ326855.1__QZI85596.1__CPT_Suzuki_023__00023
Bact-VirMZ326855.1__QZI85596.1__CPT_Suzuki_023__00023
Identity
- Accession:
- MZ326855 ↗
- Kingdom:
- phage
Quality
67.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Casjensviridae›
Sanovirus›
Stenotrophomonas_phage_Suzuki
TaxID: 2859663
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-48
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nyvA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.60 | 47.0 | 4.41e-01 | 97.8% | 96.9% |
| 1k4kB00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.59 | 43.0 | 2.81e-01 | 80.4% | 73.0% |
| 5c50B00 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.59 | 51.0 | 3.41e-01 | 100.0% | 30.8% |
| 7b00A01 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.57 | 44.0 | 2.62e-01 | 89.1% | 74.0% |
| 3e9lA02 | 1.20.80.40 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region | 0.53 | 42.0 | 3.47e-01 | 100.0% | 45.3% |
| 3tw8A03 | 6.10.140.1000 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 34.0 | 3.59e-01 | 97.8% | 58.5% |
| 2e9xD01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 36.0 | 2.57e-01 | 71.7% | 69.3% |
| 4wv4B00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.51 | 42.0 | 3.42e-01 | 95.7% | 89.2% |
| 3s3lA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.51 | 42.0 | 2.97e-01 | 100.0% | 33.3% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3784780 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.61 | 47.0 | 3.63e-01 | 100.0% | 38.1% |
| 3898759 | 109.4.1.1875 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BROMI, BROMI_C | 0.57 | 39.0 | 2.53e-01 | 71.7% | 19.1% |
| 3740332 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.57 | 41.0 | 3.50e-01 | 78.3% | 82.5% |
| 4622038 | 4120.1.1.84 ↗ | few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP › DUF5563 | 0.57 | 47.0 | 4.56e-01 | 100.0% | 89.1% |
| 3970522 | 5050.1.1.54 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Mntp | 0.55 | 42.0 | 2.83e-01 | 100.0% | 21.1% |
| 3459964 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.52 | 38.0 | 2.55e-01 | 100.0% | 20.0% |