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MZ326859.2__QYW02088.1__CPT_Siara_088__00085
Bact-VirMZ326859.2__QYW02088.1__CPT_Siara_088__00085
Identity
- Accession:
- MZ326859 ↗
- Kingdom:
- phage
Quality
74.2
mean pLDDT
Taxonomy
TaxID: 2859658
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 36-69
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ed4A02 | 3.30.1120.10 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.80 | 69.0 | 5.19e-01 | 100.0% | 48.2% |
| 4immA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.75 | 63.0 | 3.61e-01 | 100.0% | 10.0% |
| 5xyig01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.75 | 63.0 | 3.68e-01 | 100.0% | 13.7% |
| 2xzhA00 | 2.130.10.110 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain | 0.75 | 62.0 | 3.56e-01 | 100.0% | 9.8% |
| 3erwF00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.74 | 57.0 | 3.83e-01 | 88.2% | 79.4% |
| 4q1vA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.74 | 63.0 | 3.51e-01 | 100.0% | 9.4% |
| 2b5xA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.73 | 57.0 | 3.73e-01 | 88.2% | 69.6% |
| 2f2hA01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.71 | 57.0 | 3.46e-01 | 97.1% | 90.2% |
| 2ju5A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.70 | 55.0 | 3.85e-01 | 94.1% | 82.3% |
| 3gd0A02 | 3.30.920.50 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain | 0.70 | 60.0 | 4.17e-01 | 100.0% | 36.6% |
| 3qwuA02 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.70 | 54.0 | 3.35e-01 | 85.3% | 33.9% |
| 3pvlA04 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.69 | 59.0 | 4.30e-01 | 100.0% | 42.4% |
| 3rkgA01 | 2.40.128.330 | Mainly Beta › Beta Barrel › Lipocalin › | 0.69 | 53.0 | 3.97e-01 | 100.0% | 33.0% |
| 3hbcA00 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.67 | 53.0 | 3.18e-01 | 100.0% | 27.8% |
| 3vsmA03 | 2.60.40.4340 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.66 | 54.0 | 4.07e-01 | 100.0% | 78.7% |
| 2zxrA01 | 2.40.50.460 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.66 | 54.0 | 3.54e-01 | 97.1% | 34.8% |
| 4v19S00 | 3.30.420.80 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 | 0.66 | 50.0 | 3.37e-01 | 88.2% | 23.8% |
| 3bpqD00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.66 | 53.0 | 4.14e-01 | 100.0% | 44.2% |
| 2yj6A02 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.66 | 52.0 | 3.96e-01 | 97.1% | 38.9% |
| 4lxqB00 | 3.40.50.12230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 45.0 | 2.66e-01 | 76.5% | 9.1% |
| 1hxnA00 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.64 | 54.0 | 3.38e-01 | 100.0% | 17.6% |
| 2jpiA00 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.64 | 51.0 | 3.82e-01 | 100.0% | 35.4% |
| 4esnA00 | 2.60.320.10 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › N-utilization substance G protein NusG, insert domain | 0.63 | 49.0 | 4.02e-01 | 100.0% | 48.7% |
| 2l1sA00 | 3.10.450.160 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › inner membrane protein cigr | 0.63 | 52.0 | 4.01e-01 | 100.0% | 56.6% |
| 3a27A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 47.0 | 3.03e-01 | 97.1% | 50.2% |
| 3dxqA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 49.0 | 3.88e-01 | 100.0% | 72.3% |
| 3f8tA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 45.0 | 3.69e-01 | 94.1% | 60.0% |
| 4r3dA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 47.0 | 3.23e-01 | 94.1% | 29.9% |
| 1bagA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.61 | 50.0 | 4.02e-01 | 100.0% | 94.9% |
| 1x9zA01 | 3.30.1540.20 | Alpha Beta › 2-Layer Sandwich › formyl-coa transferase, domain 3 › MutL, C-terminal domain, dimerisation subdomain | 0.60 | 48.0 | 3.68e-01 | 100.0% | 87.1% |
| 2n54B00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 42.0 | 3.56e-01 | 79.4% | 43.9% |
| 1m3qA01 | 3.30.310.40 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.59 | 46.0 | 3.63e-01 | 100.0% | 40.4% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.59 | 47.0 | 3.92e-01 | 100.0% | 47.2% |
| 4xpmB00 | 3.40.1840.10 | Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like | 0.59 | 45.0 | 3.82e-01 | 94.1% | 49.3% |
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.56 | 47.0 | 3.47e-01 | 94.1% | 54.9% |
| 5llwA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 46.0 | 3.43e-01 | 100.0% | 45.7% |
| 3nffH00 | 6.20.250.70 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.55 | 41.0 | 3.07e-01 | 97.1% | 60.4% |
| 5tkwA02 | 3.30.420.370 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › GspL cytoplasmic domain, C-terminal subdomain | 0.54 | 39.0 | 3.43e-01 | 94.1% | 47.0% |
| 4bqhA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.54 | 42.0 | 2.39e-01 | 100.0% | 63.1% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3260272 | 220.1.1.10 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SSrecog | 0.85 | 59.0 | 3.86e-01 | 73.5% | 19.2% |
| 5012768 | 5.1.10.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › DUF6849 | 0.82 | 67.0 | 5.44e-01 | 100.0% | 49.2% |
| 3287367 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.81 | 65.0 | 3.82e-01 | 100.0% | 11.2% |
| 3404770 | 5.1.4.175 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT122_2nd | 0.80 | 65.0 | 3.84e-01 | 100.0% | 11.9% |
| 3393983 | 220.1.1.86 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N | 0.79 | 70.0 | 4.78e-01 | 100.0% | 41.8% |
| 3263774 | 220.1.1.121 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SLA1 | 0.78 | 69.0 | 4.38e-01 | 100.0% | 25.2% |
| 4987737 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.77 | 65.0 | 3.79e-01 | 100.0% | 11.5% |
| 3964452 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.77 | 54.0 | 3.17e-01 | 73.5% | 9.8% |
| 5054848 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.77 | 63.0 | 4.50e-01 | 100.0% | 32.0% |
| 3566475 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.77 | 66.0 | 3.87e-01 | 100.0% | 12.1% |
| 3967100 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.76 | 64.0 | 3.88e-01 | 100.0% | 15.0% |
| 3661144 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.76 | 66.0 | 3.77e-01 | 100.0% | 10.4% |
| 5069536 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.76 | 63.0 | 4.32e-01 | 100.0% | 27.5% |
| 3520661 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.76 | 62.0 | 3.47e-01 | 100.0% | 6.7% |
| 3166905 | 5.1.4.74 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N | 0.75 | 59.0 | 3.45e-01 | 100.0% | 10.3% |
| 3930104 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.75 | 60.0 | 3.58e-01 | 100.0% | 12.2% |
| 4031431 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.74 | 57.0 | 4.81e-01 | 100.0% | 47.7% |
| 3997759 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.74 | 63.0 | 3.52e-01 | 100.0% | 8.1% |
| 3247469 | 220.1.1.161 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26659 | 0.74 | 65.0 | 4.36e-01 | 100.0% | 32.8% |
| 4026002 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.74 | 60.0 | 3.47e-01 | 100.0% | 10.7% |
| 4971751 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.73 | 62.0 | 4.31e-01 | 100.0% | 28.3% |
| 4939866 | 2485.1.1.37 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_2 | 0.73 | 62.0 | 4.22e-01 | 97.1% | 72.5% |
| 4973622 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.73 | 58.0 | 4.51e-01 | 97.1% | 40.0% |
| 5045767 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.72 | 59.0 | 4.40e-01 | 100.0% | 36.7% |
| 3250883 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.71 | 60.0 | 4.28e-01 | 100.0% | 35.2% |
| 4981259 | 243.6.1.1 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 | 0.70 | 55.0 | 4.60e-01 | 94.1% | 78.5% |
| 5055306 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 52.0 | 3.23e-01 | 100.0% | 13.8% |
| 3332079 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.67 | 54.0 | 3.02e-01 | 91.2% | 8.4% |
| 5005470 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.67 | 54.0 | 4.05e-01 | 100.0% | 33.0% |
| 4944418 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.65 | 52.0 | 4.24e-01 | 100.0% | 42.7% |
| 3537919 | 719.2.1.1 ↗ | beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N | 0.65 | 54.0 | 4.05e-01 | 97.1% | 100.0% |
| 3603228 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.65 | 46.0 | 3.49e-01 | 82.4% | 77.9% |
| 2756608 | 270.1.1.0 ↗ | beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related | 0.63 | 44.0 | 3.46e-01 | 76.5% | 31.6% |
| 5037187 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.63 | 51.0 | 3.76e-01 | 94.1% | 35.8% |
| 5014619 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.63 | 50.0 | 4.01e-01 | 100.0% | 48.8% |
| 1820980 | 79.1.1.2 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Hyaluronidase_1 | 0.63 | 50.0 | 3.20e-01 | 100.0% | 17.5% |
| 3294540 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.62 | 51.0 | 2.87e-01 | 97.1% | 9.2% |
| 3469461 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.61 | 50.0 | 2.91e-01 | 97.1% | 73.2% |
| 3819664 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.61 | 49.0 | 2.80e-01 | 97.1% | 9.5% |
| 1837476 | 331.1.1.6 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › DUF3378 | 0.59 | 47.0 | 4.00e-01 | 100.0% | 50.7% |
| 3785779 | 604.3.1.11 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › DUF155 | 0.57 | 43.0 | 2.74e-01 | 100.0% | 13.6% |